BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934533 Length=975 Score E Sequences producing significant alignments: (Bits) Value AT2G38230.1 | Symbols: ATPDX1.1, PDX1.1 | pyridoxine biosynthes... 1591 0.0 AT2G38210.1 | Symbols: PDX1L4 | putative PDX1-like protein 4 | ... 414 7e-115 > AT2G38230.1 | Symbols: ATPDX1.1, PDX1.1 | pyridoxine biosynthesis 1.1 | chr2:16011456-16012508 FORWARD LENGTH=1053 Length=1053 Score = 1591 bits (861), Expect = 0.0 Identities = 934/970 (96%), Gaps = 1/970 (0%) Strand=Plus/Plus Query 6 TCTCAAAACCCTAGaaaaaaaTGGCAGCAACCGGAGTTGTGGCGGTGTACGGCGAAGGAG 65 |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1 TCTCAAAACCCTAG-AAAAAATGGCAGGAACCGGAGTTGTGGCGGTGTACGGCGAAGGAG 59 Query 66 CCGTGACGGAGACGAAGCAGAAATCTCCCTTCTCCGTCAAGGTTGGTCTCGCTCAGATGC 125 || ||||||||||||| |||||||||||||||||||| || ||||||||||||||||||| Sbjct 60 CCATGACGGAGACGAAACAGAAATCTCCCTTCTCCGTGAAAGTTGGTCTCGCTCAGATGC 119 Query 126 TTCGTGGCGGTGTAATCATGGACGTCGTCAACGCAGAGCAAGCTCGAATCGCTGAAGAAG 185 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 120 TTCGTGGCGGTGTAATCATGGATGTCGTCAACGCAGAGCAAGCTCGAATCGCTGAAGAAG 179 Query 186 CCGGCGCTTGCGCCGTGATGGCTCTTGAACGTGTTCCCGCCGATATTCGAGCTCAAGGCG 245 | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 CTGGCGCATGCGCCGTGATGGCTCTTGAACGTGTTCCCGCCGATATTCGAGCTCAAGGCG 239 Query 246 GTGTTGCTCGAATGAGCGATCCTGAGATGATTAAAGAAATCAAAAACGCCGTGACGATCC 305 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| | Sbjct 240 GTGTTGCTCGAATGAGCGATCCAGAGATGATCAAAGAAATCAAAAACGCCGTGACGATTC 299 Query 306 CGGTGATGGCTAAAGCTAGAATTGGTCATTTCGTTGAAGCTCAGATCTTGGAAGCAATCG 365 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 300 CGGTGATGGCGAAAGCTAGAATTGGTCATTTCGTTGAAGCTCAGATCCTGGAAGCAATCG 359 Query 366 GAGTTGATTACGTCGACGAGAGTGAAGTTCTCACTCTCGCCGACGAAGATAATCACATCA 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 GAGTTGATTACGTCGACGAGAGTGAAGTTCTCACTCTCGCCGACGAAGATAATCACATCA 419 Query 426 ACAAACATAATTTCAAAATCCCTTTTGTCTGTGGATGTAGGAACCTCGGTGAAGCTTTAA 485 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 420 ACAAACATAATTTCAAAATCCCTTTTGTTTGTGGATGTAGGAATCTCGGTGAAGCTTTAA 479 Query 486 GGCGGATCCGTGAAGGAGCCGCCATGATAAGAACTAAAGGAGAGGCTGGAACTGGAAACG 545 |||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||| Sbjct 480 GGCGGATCCGTGAAGGAGCCGCCATGATAAGAACCAAAGGTGAGGCTGGAACTGGTAACG 539 Query 546 TCGTTGAAGCCGTTAGGCACGTGAGGAGTGTGAACGGAGCTATTCGGTTACTTAGAAACA 605 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 540 TTGTTGAAGCCGTTAGGCACGTGAGGAGTGTGAACGGAGCTATTCGGTTACTTAGAAGCA 599 Query 606 TGGACGATGACGAAGTTTTCACTTTCGCGAAAAAGATCGCTGCGCCGTATGATTTGGTTG 665 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 600 TGGACGATGACGAGGTTTTCACTTACGCGAAAAAGATCGCTGCGCCGTATGATTTGGTTG 659 Query 666 TGCAGACGAAGGAGCTTGGGAGGTTACCGGTGGTTCAATTCGCTGCCGGGGGAGTTGCGA 725 ||||||| ||||||||||||||||||||||||||||| |||||||| || ||||| |||| Sbjct 660 TGCAGACTAAGGAGCTTGGGAGGTTACCGGTGGTTCAGTTCGCTGCTGGAGGAGTGGCGA 719 Query 726 CTCCCGCGGACGCGGCTTTGATGATGCAGTTGGGATGTGATGGAGTGTTTGTTGGGTCGG 785 | || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 720 CGCCGGCGGATGCGGCGTTGATGATGCAGTTGGGATGTGATGGAGTGTTTGTTGGGTCGG 779 Query 786 GTGTTTTCAAGAGTGGAGATCCGGTGAAAAGGGCTAAGGCGATTGTGCAGGCGGTTACGA 845 |||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct 780 GTGTTTTCAAGAGTGGAGATCCGGTGAAGAGGGCTAAGGCTATTGTTCAGGCGGTTACGA 839 Query 846 ATTATAGAGACGCGGCGGTGTTGGCGGAGGTGAGCTGTGGTTTAGGTGAAGCCATGGTTG 905 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 ATTATAGAGACGCGGCGGTGTTGGCGGAGGTGAGCTGTGGTTTAGGTGAAGCCATGGTTG 899 Query 906 GTCTTAATTTGGATGATAAGGTTGAGAGGTTCGCTAGCCGTTCTGAGTAACCAATCAAAT 965 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 900 GTCTTAATTTGGATGATAAGGTTGAGAGGTTCGCTAGTCGTTCTGAGTAACCAATCAAAT 959 Query 966 TTCAGATGTT 975 |||||||||| Sbjct 960 TTCAGATGTT 969 > AT2G38210.1 | Symbols: PDX1L4 | putative PDX1-like protein 4 | chr2:16007012-16007690 FORWARD LENGTH=679 Length=679 Score = 414 bits (224), Expect = 7e-115 Identities = 243/252 (96%), Gaps = 1/252 (0%) Strand=Plus/Plus Query 1 CACTCTCTCAAAACCCTAGaaaaaaaTGGCAGCAACCGGAGTTGTGGCGGTGTACGGCGA 60 ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct 163 CACTCTCTCAAAACCCTAG-AAAAAATGGCAGGAACCGGAGTTGTGGCGGTGTACGGCGA 221 Query 61 AGGAGCCGTGACGGAGACGAAGCAGAAATCTCCCTTCTCCGTCAAGGTTGGTCTCGCTCA 120 ||||||| ||||||||||||| |||||||||||||||||||| || |||||||||||||| Sbjct 222 AGGAGCCATGACGGAGACGAAACAGAAATCTCCCTTCTCCGTGAAAGTTGGTCTCGCTCA 281 Query 121 GATGCTTCGTGGCGGTGTAATCATGGACGTCGTCAACGCAGAGCAAGCTCGAATCGCTGA 180 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 282 GATGCTTCGTGGCGGTGTAATCATGGATGTCGTCAACGCAGAGCAAGCTCGAATCGCTGA 341 Query 181 AGAAGCCGGCGCTTGCGCCGTGATGGCTCTTGAACGTGTTCCCGCCGATATTCGAGCTCA 240 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 342 AGAAGCTGGCGCATGCGCCGTGATGGCTCTTGAACGTGTTCCCGCCGATATTCGAGCTCA 401 Query 241 AGGCGGTGTTGC 252 |||||||||||| Sbjct 402 AGGCGGTGTTGC 413 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47722439650 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5