BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg934591
Length=4281
Score E
Sequences producing significant alignments: (Bits) Value
AT2G38440.1 | Symbols: ITB1, SCAR2, DIS3, WAVE4, ATSCAR2 | SCAR... 3530 0.0
> AT2G38440.1 | Symbols: ITB1, SCAR2, DIS3, WAVE4, ATSCAR2 | SCAR
homolog 2 | chr2:16095329-16101221 FORWARD LENGTH=4791
Length=4791
Score = 3530 bits (1911), Expect = 0.0
Identities = 2172/2298 (95%), Gaps = 17/2298 (1%)
Strand=Plus/Plus
Query 1 TCAGACAGAGAAGCTCAAACAATGCCTTTGACGAGGTATCAATCTCGTAACGAGTATGGA 60
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 201 TCAGACAGAGAAGCTCAAACAATGCCGTTGACGAGGTACCAATCTCGTAACGAGTATGGA 260
Query 61 TTAGCAGATCCGGATCTATACCAAGCTGCTGATAAAGATGACCCTGAAGCTCTGCTTGAA 120
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 261 TTAGCAGATCCGGATCTGTATCAAGCTGCTGATAAAGATGACCCTGAAGCTCTGCTTGAA 320
Query 121 GGAGTCGCCATGGCTGGTCTTGTTGGCATTTTGCGTCAACTCGGTGATCTCGCTGAGTTT 180
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 321 GGAGTCGCTATGGCTGGTCTCGTTGGCATTTTGCGTCAACTCGGTGATCTCGCTGAGTTT 380
Query 181 GCTGCTGAGATGTTTCATGACTTGCACGAAGAAGTAATGGCTACTGCTTCTAGAAGCCAT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 381 GCTGCTGAGATGTTTCATGACTTGCACGAAGAAGTAATGGCTACTGCTTCTAGAAGCCAT 440
Query 241 GGTCTAATGGCTCGTGTACAACAATTGGAAATAGAGTTCCCTTCTATAGAGAAGGCATTA 300
||| ||||||||||||| ||||| |||||| |||||| |||||||||||||||||||||
Sbjct 441 GGTTTAATGGCTCGTGTGCAACAGTTGGAAGCAGAGTTTCCTTCTATAGAGAAGGCATTA 500
Query 301 CTGTGTCAGACCGATCATTCGCCATTTTTCTCTAATAAAGGTGTGGAATGGCATCCGAAT 360
|||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 501 CTGTGTCAAACCGATCATTCGCCGTTTTTCTCTAACAAAGGTGTGGAATGGCATCCGAAT 560
Query 361 CTACAATTGGAACAGAGTGTGGTTACAAGTGGTGACTTACCCCGCTGTGTGATGGATTCT 420
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 561 CTACAATTGGAACAGAGTGTGGTTACAAGTGGTGACTTACCTCGTTGTGTGATGGATTCT 620
Query 421 TATGAGGAATGCCGAGGTCCTCCGAGGCTATTTCTTCTGGACAAGTTCGATATTTCGGGA 480
||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct 621 TATGAGGAATGTCGAGGTCCTCCAAGGCTATTTCTTCTGGACAAGTTTGATATTTCCGGA 680
Query 481 GCTGGGGCTTGCTTGAAACGCTACACCGATCCATCATTTGTTAGGCTTGAAACGTCTTCA 540
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 681 GCTGGGGCTTGTTTGAAACGCTACACCGATCCATCGTTTGTTAGGCTTGAAACGTCTTCA 740
Query 541 TATGAAGAATCATGGGATGATATTCAGAGAGAGAAGAAATCACAGAAAGCAAAGAGGAGA 600
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 741 TATGAAGAATCATGGGATGATATTCAGAGAGAGAAAAAATCACAGAAAGCAAAGAGGAGA 800
Query 601 GCATCTCATTGGAGGAATGGAGGAACACCTGAAAATGCATTATCATCACATGCCAAATTG 660
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 801 GCATCTCAGTGGAGGAATGGAGGGACACCTGAAAATGCATTATCATCACATGCCAAATTG 860
Query 661 CATGAATTGTTTTTGGAGGAGCATTTAGAGGCTCATCATTCAGATCCAGCGCGCGCTGTG 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 861 CATGAATTGTTTTTGGAGGAGCATTTAGAGGCTCATCATTCAGATCCAGCGCGCGTTGTG 920
Query 721 AAGTTGAAAACTAGAAAGCTGGATGGGTGTTCCCTTATATCAAAATCAGGGGAAAGCTAC 780
||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 921 AAGTTGAAAACCAGAAAGCTAGATGGGTGTTCCCTTATTTCAAAATCAGGGGAAAGCTAC 980
Query 781 ATGGAGAAATTTGTGCAGACACGTGTAGATAGTAAAATAAGTTATGAAATAATTACCCAA 840
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 981 ATGGAGAAATTTGTGCAGACACGTGTAGATAGTAAGATAAGTTATGAAATAATTACCCAA 1040
Query 841 AACCCCGGATTGTTGACATGGAATATGGATAGTGCTAGAGACT-TAGTAACCGATATACC 899
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 1041 AACCCCGGATTGTTGACATGGAATATGGATAGTGCTAGAGA-TGTAGTAACCGATATACC 1099
Query 900 TGAAATTAGTATGGTGGATGCTATGGATAAGTCTCACGGAGGAAGCAGAGCAGAGGTTTC 959
|||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct 1100 TGAAATCAGTATGGTGGGTGCTATGGATAAGTCTCATGGAGGAAGCAGAGCAGAGGTTTC 1159
Query 960 ATTACCAAGTGAGCAGGAGAATGTGGCTGATATTAACTTAAATGGAGGTTTTATTGAAAA 1019
||| |||||||||||||| |||||||| || ||||| | ||||| ||||||||||||||
Sbjct 1160 ATTCCCAAGTGAGCAGGAAAATGTGGCAAATGTTAACATGAATGGGGGTTTTATTGAAAA 1219
Query 1020 AGATATAGAGACAGTGCCTGAATCTACATACAATGAGATCCCTGGTACAACTAGTACAAA 1079
||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| |||| |
Sbjct 1220 AGATATAGAGACAGTGCCTGAATCTACATACAATGAGGTCCGTGGAACAACTATTACACA 1279
Query 1080 GGATTCACAAATTAATTTGAATGGGAAGCCAGCG-TTTTTACAACAGAGGAGTTATTCTG 1138
||||||||||| |||||| |||||||||| | ||||| |||||||||||||||||||
Sbjct 1280 GGATTCACAAACGGTTTTGAACGGGAAGCCAG-GATTTTTTCAACAGAGGAGTTATTCTG 1338
Query 1139 AAGATTTAACCAGTGAGGCTGACAATTATGTGGACGCACCAGCCACCATGGAGTCGGAAA 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1339 AAGATTTAACCAGTGAGGCTGACAATTATGTGGACGCACCAGCCACCATGGAGTCGGAAA 1398
Query 1199 CAGAAACAGATGATGAGTGTAGACCTAAGAGTAGATCAGATGCTTTGAAGGATGGGAACC 1258
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1399 CAGAAACAGACGATGAGTGTAGACCTAAGAGTAGATCAGATACTTTGAAGGATGGGAACC 1458
Query 1259 ATCGTACATATTCTGATGCGGATGAAGAGAAGA-TGGAGGACCCACCTCAATTTTCATTT 1317
||| || |||||||||||||| |||||||| || |||||||||||||||| |||||||||
Sbjct 1459 ATCATATATATTCTGATGCGGTTGAAGAGA-GAATGGAGGACCCACCTCAGTTTTCATTT 1517
Query 1318 TTTCATTCAAATGGAAACACACCAGTTTCAGAAAATGGGCGAAGCTCATTTGGGAAACGG 1377
| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |
Sbjct 1518 TCTCATTCAAATGGAAACACACCAGTTTCGGAAAATGGGCGAAGCTCGTTTGGGAAAAAG 1577
Query 1378 AGCACTAGTTACTCTTACTCGGACAGTGCAAGCATATCCATTGATGATCAATCTGATGGA 1437
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1578 AGCACTAGTTATTCTTACTCGGACACTGCAAGCATATCCATTGATGATCAATCTGATGGA 1637
Query 1438 GAGAAACTTTCTGGATGTTTACCTTCTACTTCTAGTTTTAAGAGTGAGTTGGTGGATTCT 1497
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1638 GAGAAACTTTCGGGATGTTTACCTTCTACTTCTAGTTTTAAGAGTGAGTTGGTGGATTCT 1697
Query 1498 ACGTCTCACGTTACTCCTGAAGCCAAGAAAGTGTCTGATT--TT-AATGTTCAGGAATCA 1554
| |||||||||||||||||||||||| ||||||||| || || |||||||||||||||
Sbjct 1698 ATGTCTCACGTTACTCCTGAAGCCAACAAAGTGTCTCATGACTTGAATGTTCAGGAATCA 1757
Query 1555 GTTAGTAGCAGTAATGTAGATGGCCAGGCATCATTAAGTTTGAATGGTACGTGTTCAAGT 1614
||||||||||| ||||||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct 1758 GTTAGTAGCAGCAATGTAGATGGCCAGACATCATTAAGTTCGAATGGTACATGTTCAAGT 1817
Query 1615 CCAAGGCCAGTCTCTCAGAATGATCAATCATGTTCACTGACAGTTCAATCTTTAGCACCA 1674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1818 CCAAGGCCAGTCTCTCAGAATGATCAATCATGTTCACTGACAGTTCAATCTTTAGCATCA 1877
Query 1675 GAAGTCGTTGAAACTTCTCCAGAACTTGTTAGGCTTGATCTAATGAAGGGAGGCAATGAT 1734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1878 GAAGTCGTTGAAACTTCTCCAGAACTTGTTAGGCTTGATCTAATGAAGGGAGGCAATGAT 1937
Query 1735 GGAAGCAAGGTGGATCCATTGGATTCTTCAAAATCTTGTGCATCTTTTGATGCTAAAAAC 1794
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1938 GGAAGAAAGGTGGATCCATTCGATTCTTCAAAATCTTGTGCATCTTTTGATGCTAAAAAC 1997
Query 1795 TCTAACTTGCCTTCTGAAACTTCGTCAATTAGTTCAACTTCTGAAGGAAGCAGATGCGAT 1854
||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1998 TCTGACTTGCCTTCTGAAACTTCATCAATTAGTTCAACTTCTGAAGGAAGCAGATGTGAT 2057
Query 1855 ACTACCATTGAGAAGAACTGTATGGTTGCTTCAAATTTAGTAAACTCAGACACTAGTCCT 1914
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2058 AGTACCATTGAGAAGAACTGTATGGTTGCTTCAAATTTAGTAAACTCAGGCACTAGTCCT 2117
Query 1915 CAAGTGTTTGTGGATAGTCAAACAGGTAAACAGTTACCTATCGCTGATAATGATATTGAG 1974
|||| |||||| ||||||||||| ||||||||||||||||||||||||| |||| |||||
Sbjct 2118 CAAGCGTTTGTTGATAGTCAAACTGGTAAACAGTTACCTATCGCTGATACTGATTTTGAG 2177
Query 1975 ACAAACTCTACAGTTGCTTGTTCTGAAGTTTTAGCAAACTCAGGCAGCGATCCTGAAGGA 2034
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2178 ACAAACTCTATAGTTGCTTGTTCTGAAGTTTTAGCAAACTCAGGCAGCGATCCTGAAGAA 2237
Query 2035 CTTGATGGTAGTGGCCTAACAGGAAAGCCA-T-CCT--C--AGCTGGGATGGGGATGGAA 2088
| ||||||| || ||||||||||||||| | ||| | ||||||| |||||||||||
Sbjct 2238 CGTGATGGTCGTTGCCTAACAGGAAAGCTGGTACCTTGCTCAGCTGGGGTGGGGATGGAA 2297
Query 2089 GTTTCACCTGATATGCCCTCTAAAGTCTGTGGTCCAAGTACAGTTGATGGAATTCACTTA 2148
||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 2298 GTTTCCCCTGATACGCCCTCTAAAGTCTGTGGTCCAAGTTCAGCTGATGGAATTCACTTA 2357
Query 2149 AAAGATACTCTGGAGGATGAAACCGATTGTATTACAGTGACTAATGTAGTTGCTGACGTT 2208
|||||||||||||| ||||||||||||||| || ||||||||||||| |||| |||||||
Sbjct 2358 AAAGATACTCTGGATGATGAAACCGATTGTGTTTCAGTGACTAATGTTGTTGTTGACGTT 2417
Query 2209 GATTCTAAAAATTCTGTTGCCGACGTTGGTTCTAAAAATTCAGTTGCCGA-AGTTGGTTC 2267
||||||||||||||||||||||||||||||||| ||| ||||||||| || | ||| |||
Sbjct 2418 GATTCTAAAAATTCTGTTGCCGACGTTGGTTCTCAAAGTTCAGTTGCTGACA-TTGATTC 2476
Query 2268 TCAAAGTTCAGTTGCTGA 2285
||||||||||||||||||
Sbjct 2477 TCAAAGTTCAGTTGCTGA 2494
Score = 2220 bits (1202), Expect = 0.0
Identities = 1527/1677 (91%), Gaps = 50/1677 (3%)
Strand=Plus/Plus
Query 2260 GTTGGTTCTCAAAGTTCAGTTGCTGACGTTGATTCTCAAAGTTCAGTTGCTGACATTGAT 2319
|||| |||| ||| ||| ||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 2415 GTTGATTCTAAAAATTCTGTTGCCGACGTTGGTTCTCAAAGTTCAGTTGCTGACATTGAT 2474
Query 2320 TCTCAAAGTTCAGTTGCTGAGATCTCCGATGAGCATTCATGTGCCTTTGACAACACGGCT 2379
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2475 TCTCAAAGTTCAGTTGCTGAGATCTCCGATGAGCATTCATGTGCCTTTGGCAACACGGCT 2534
Query 2380 GATGTATCTGTTTCAGAGTCCCATGAAGACACACTAGAGAATGGAATGTCCATGCCTGAT 2439
||||| |||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 2535 GATGTGTCTGTTTCAGAGTCCCATGAAGACACACTAGAGAATGGAATG----T-CC---- 2585
Query 2440 GAAGTTGATAGTAAGCTGACTTCTGATTTTAACTTGGGAGGAGAGAAATTAGTGGGAGCT 2499
|| || ||||||||||||||| ||||| ||||||||| | ||||| |
Sbjct 2586 ----------GT--GC---CTTCTGATTTTAACTCGGGAGTAGAGAAATTGGCGGGAGAT 2630
Query 2500 GCTTCACCTACTTGTAGCAAATGCGATGAACATATCTCTCATGAAGGTTTTCATGACCTT 2559
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2631 GCTTCACCTACTTGTAGCAAATGCGATGACCATATCTCTCATGAAGGTTTTCATGACCTT 2690
Query 2560 TCAGGGCTGGACAACGCAACCACAGACATTGTTCCGAACGTAGAGCTTGCTGTGTCTGAT 2619
|||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||
Sbjct 2691 TCAGGGCTGGACAACGCAACCACAGACATTGTCCCGAACGTTGAGCTTGATGTGTCTGAT 2750
Query 2620 AATGACAATGATACTTCCAGTGGTGGTGTTAACCATGCCATTAGTCTGTCATCTACTAGT 2679
||||||||||| |||||||||||||||||||| |||||| ||||||||||||| ||| ||
Sbjct 2751 AATGACAATGACACTTCCAGTGGTGGTGTTAATCATGCCGTTAGTCTGTCATCGACTCGT 2810
Query 2680 TTGAATGGTTCTCTGCCTTGGATTTCGACCAATACTTATCAATCGTGTTCTGATGCTGGA 2739
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2811 GGGAAGGGTTCTCTGCCTTGGATTTCGACCAATACTTATCAATCGTCTTCTGATGCTGGA 2870
Query 2740 GAGATTTTCCATGATACAGTTGTAGAGTCTGACGGGACACTACCAGCAGACAATAATCCA 2799
||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 2871 GAGATTTTCCATGATACAGTTGTAGAGTCTGACGGGACACTACTGGAAGACAATAATCCA 2930
Query 2800 GAGTCAGAGATAAAAATGCAGAAAAGCCCTCTGGAAGTGTCTTCAGAAGGTCTGAGTGCT 2859
||||| || ||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct 2931 GAGTCGGAAATAAAAATGCATAAAAGCCCTCTGGAAGTGTCTTCAGAAGGTCTGAGTACT 2990
Query 2860 GC-CCTAGACAACAAGGACGCAGAAAGT-TGTGAATCTATAAGTCCCAAGCCATCTCTGG 2917
| || |||||||||||||| ||||||| | |||||||| ||||||||||||||||||||
Sbjct 2991 GAACC-AGACAACAAGGACGTAGAAAGTAT-TGAATCTACAAGTCCCAAGCCATCTCTGG 3048
Query 2918 ATCAAAGGGACAGAAACACAGAAACAAAATCTTCTGGCGAGAGCATTCTTGATGACAATT 2977
|||||||| |||| |||||||||| |||||| |||| ||||||||||||||||| ||||
Sbjct 3049 ATCAAAGGAACAGGGACACAGAAACCAAATCTCCTGGTGAGAGCATTCTTGATGATAATT 3108
Query 2978 ACATAGATTCCTCACCAGTGAATAATCTGAACGTTTTAGAGAGTGAGG-T--CGAGCACT 3034
|||||||||| ||| |||| ||||||||||| ||||||||||||||| | ||| ||
Sbjct 3109 GCATAGATTCCACACAAGTGTATAATCTGAACCTTTTAGAGAGTGAGGCTATCGACCAGG 3168
Query 3035 CGGTTAGAGAGCAAACACCTTGTGCAAGCCATGAAGCCGCAGATGAGGAATTGCTGCCGT 3094
| ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||
Sbjct 3169 CAGTTAGAGAGCAAACATCTTATGCAAGCCATGAAGTTGCAGATGAGGAATTGCTGCAGT 3228
Query 3095 CAAATGTTTTCAGGGGCTTAGAGTTTGTACCACAATCAGCAGGCTTAGAATTTGCACCAC 3154
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 3229 CAAATGTTTTCAGGGGCTTAGAGTTTGAACCACAATCAGCAGGCTTAGAATTTGCACCAC 3288
Query 3155 AACCAGCAGGGT-TAGAATTGAACAGACCCAAGCAAGAGTTGAATCTGGATCCTACTTTT 3213
|| | ||||| | |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3289 AATCTGCAGG-TATAGAATTGAACAGACCTAAGCAAGAGTTGAATCTGGATCCTACTTTT 3347
Query 3214 CCTAGCTTTGGTTTTATCCCTGAGACTACTCCACCCAATCCGGAGGACATGCCACCGCTG 3273
|||||||||||||||||||||||||||| ||| |||||||| |||||||||||||| |
Sbjct 3348 CCTAGCTTTGGTTTTATCCCTGAGACTATTCCGCCCAATCCAGAGGACATGCCACC-C-- 3404
Query 3274 CCACCCCTTCCTCCTATGCAATGGCGTATTGGAAAGGTTCCACATTCTTTTCCTACCTTC 3333
| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3405 C------TTCCTCCTATGCAATGGCTTATTGGAAAGGTTCCACATTCTTTTCCTACCTTC 3458
Query 3334 ATGGTGGAATCAGTCGAAACCAGTAATTCTGCTCCATCAGCGGCACCACCCATTGGTTCT 3393
|||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 3459 ATGGGGGAATCAGTCGAAACCAGTAGTTCTGCTTTATCAGCGGCACCACCCATTGGTTCT 3518
Query 3394 AGCTTGAATTTTCAAATTGGGTCTCAACCAGCAGAGCTGTGTATATCTTTAGGAAGTGAC 3453
||||||||| ||||||||||||||| |||| ||||||| | | |||||||||||||||||
Sbjct 3519 AGCTTGAATGTTCAAATTGGGTCTCCACCATCAGAGCTATCTGTATCTTTAGGAAGTGAC 3578
Query 3454 GAATCAGAACAACTTCCTGGAGGGTTTGTGAACAATGCATCAGAAAAGCTGTTGCAATCA 3513
|||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 3579 GAATCAGAACGACTTCCTGGAGGGTTTGTTCACAATGCATCAGAAAAGCCATTGCAATCA 3638
Query 3514 TCCATTCAGTTCCCAACCATGGGCACTAATTTGAATAGTCAATACGACA-TTCCTGAGCT 3572
||||||||||||||||||||| ||||| ||||||||||||||||||||| ||| ||||||
Sbjct 3639 TCCATTCAGTTCCCAACCATGAGCACTGATTTGAATAGTCAATACGACAGTTC-TGAGCT 3697
Query 3573 CCCTACAATGCCTAATCAGGAGTGCATAGATGATTTTGATTCTGAGGAAAACAATCTTTT 3632
||||||||| ||| |||||||||||||||| ||||||| ||||||||| |||||||||||
Sbjct 3698 CCCTACAATACCTTATCAGGAGTGCATAGAGGATTTTGGTTCTGAGGAGAACAATCTTTT 3757
Query 3633 GGCTGACCATGCAGCTAAGAACCACGAGCTCGTTTATTCTCAAGCGTCGTCAACT-CAGG 3691
|||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||
Sbjct 3758 GGCTGACCATGCAGCTCAGAACCACGAGCTCGTTTACTCTCAAGCGTCGTCAT-TGCAGC 3816
Query 3692 AT-C-TACCGGTGAAATACGAAGATTTCAAGGACAATGCTGATGTGCATGAATCTCAAAG 3749
| | | | ||| ||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3817 -TGCCT-CAGGTTAAACACGAAGATTTCAAGGACGATGCTGATGTGCATGAATCTCAAAG 3874
Query 3750 TTCAAGCGATGATCACCATTTTCCTGAAACCAAAGCCCTGACGCCAACTCAATCAACAAA 3809
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct 3875 TTCAAGCGATGATCACCATTGTCCTGAAACCAAATCCCTGACGCCAACTCAATCAACAAA 3934
Query 3810 GGTAGAAGATAAGGGTCATTCGGCTCCTGATGCTTCAAATGCAGAAACTGCAGAATCATC 3869
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3935 GGTAGAAGATAAGGGTCATTCGGTTCCTGATGCTTCAAATGCAGAAACTGCAGAATCATC 3994
Query 3870 AAACACGTCAGTTCAGAAGATAATTCCTGCTTCAGTGGGAGATGCTATGTGGCCTGT 3926
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 3995 AAACACGTCAGTTCAGAAGATAAATCCTGTTTCAGTGGGAGATGCTATGTGGCCTGT 4051
Score = 569 bits (308), Expect = 6e-161
Identities = 337/351 (96%), Gaps = 1/351 (0%)
Strand=Plus/Plus
Query 3929 AAGTTGTCCCTACGGTTAGGCTTCCTCGGCCAAGAAGTCCGCTTGTCGATGCCGTTGCAG 3988
|||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct 4096 AAGTGGTCCCTACGGTTAGGCTTCCTAGGCCAAGAAGTCCGCTTGTCGATGCTGTTGCAG 4155
Query 3989 CTCATGACAGACGCAAGATGAAGAAAGTCTCTGAGATGGTCCAACCACCAATCAAATCAA 4048
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 4156 CTCATGACAGACGCAAGATGAAGAAAGTCTCTGAGATGGTCCATCCACCAATCAAATCAA 4215
Query 4049 AGCAAGATGACAAGGATTCGTTGCTTGCACAAATACGAAACAAGTCCGTCAATCTGAAGC 4108
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 4216 AGCAAGATGACAAAGATTCGTTGCTTGCACAAATACGAAACAAGTCCGTCAATCTAAAGC 4275
Query 4109 CTGCCGTAGCAACACGACCCAGCATCCAGACTGGTCCTAGAACAGACTTAAGGGTAGCTG 4168
| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4276 CGGCAGTAACAACACGACCCAGCATCCAGACTGGTCCTAGAACAGACTTAAGGGTAGCTG 4335
Query 4169 CAATCTTAGAGAAAGCAAATACAATACGCATGGCAATGGTTGGAAGCGACGAGGACGAAG 4228
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 4336 CAATCTTAGAGAAAGCAAATACAATACGCATGGCAATGGCTGGAAGCGACGAGGATGAAG 4395
Query 4229 ATTCTGATAGTTGGAGTGATTCTTGAAACC-ATGATCGTTGGCTTTTCCGT 4278
|||| ||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 4396 ATTCAGATAGTTGGAGTGATTCTTGAAATCGATGATCGTTGGCTTTTCCGT 4446
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 213410175522
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5