BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg934795
Length=1899
Score E
Sequences producing significant alignments: (Bits) Value
AT2G40116.1 | Symbols: | Phosphoinositide-specific phospholipa... 3055 0.0
> AT2G40116.1 | Symbols: | Phosphoinositide-specific phospholipase
C family protein | chr2:16751714-16754535 FORWARD LENGTH=2134
Length=2134
Score = 3055 bits (1654), Expect = 0.0
Identities = 1822/1901 (96%), Gaps = 19/1901 (1%)
Strand=Plus/Plus
Query 1 AAACCCTAAGTTTTAAAAACAATGGGGAAGGAGAAGAAAACAGAGTCGTATAATAACGAT 60
||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 48 AAACCCTAAAAGTTATTAACAATGGGGAAGGAGAAGAAAACAGAGTCGTATAATAACGAT 107
Query 61 AGCGGTAGTTACAATTACAAG-ATGTTCAAATGTTT-CAACCGTAAATTCAAGATCAACG 118
|||||||||||||||||| || |||||||||| ||| ||||||||||||||||||||||
Sbjct 108 AGCGGTAGTTACAATTAC-AGAATGTTCAAAT-TTTATAACCGTAAATTCAAGATCAACG 165
Query 119 AAGTCACACCTACCGACGACGTCCGTGACGCTTTTTGTCAATTCGCCGTCGGTGGCGGCG 178
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 166 AAGTCACACCCACCGACGACGTCCGTGACGCTTTTTGTCAATTCGCCGTCGGTGGCGGTG 225
Query 179 GTGGAGGAGGAGGCGGAACAGACGGAGATTCAAGTGACGGAGACGGATCATCCGGTGTAA 238
|||||||| | | | || |||||||||||||| || ||||||||| |||||||||
Sbjct 226 GTGGAGGA--A--C----C-GATGGAGATTCAAGTGATGGTGACGGATCAACCGGTGTAA 276
Query 239 TGGGTGCAGAGCAGCTCTGTTCTTTCCTTGATGACCATCAAGGTGAATCAGGAACCACCG 298
|||||||||||||||| ||||||||||| |||| |||| ||||| || ||| ||||
Sbjct 277 TGGGTGCAGAGCAGCTTTGTTCTTTCCTCGATG---ATCACGGTGAGTC---AACAACCG 330
Query 299 TCGCGGAGGCTCAACGGTTAATCGATGAGGTTATACGACGGCGACACCACGTCACGCGCT 358
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 331 TCGCGGAGGCTCAACGGTTGATCGATGAGGTTATACGACGGAGACACCACGTCACGCGCT 390
Query 359 TCACGCGCCACGGACTTGATCTCGACGATTTCTTCAATTTCCTCTTTTACGAGGATCTCA 418
||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||
Sbjct 391 TCACGCGCCACGGACTTGACCTCGACGATTTCTTCAATTTCTTATTTTACGACGATCTCA 450
Query 419 ATCCTCCCATTACGCCTCACGTGCATCAAGATATGACAGCTCCATTGTCACATTACTTCA 478
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 451 ATCCTCCCATTACCCCTCACGTGCATCAAGATATGACAGCTCCATTGTCACATTACTTTA 510
Query 479 TATACACAGGACACAATTCGTATCTTACGGGTAATCAACTAAGCAGCGATTGTAGCGAAG 538
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 511 TATACACAGGACACAATTCGTATCTTACGGGGAATCAACTAAGCAGCGATTGTAGCGAAG 570
Query 539 TCCCTGTGATCAAAGCCTTGCAAAGAGGCGTTCGAGTCATCGAGCTCGATCTTTGGCCTA 598
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 571 TCCCTGTGATCAAAGCCTTGCAACGAGGCGTTCGAGTCATCGAGCTCGATCTTTGGCCTA 630
Query 599 ACTCTACTGGAACAGATATCAATGTCCTTCACGGAAGAACGCTTACAACACCTGTACCGC 658
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 631 ACTCTACTGGGACAGATATCAATGTCCTTCACGGAAGAACGCTTACAACGCCTGTACCGC 690
Query 659 TGATCAAATGCTTGAAATCGATAAGAGATTACGCGTTTTCTAGTTCGCCTTATCCGGTTA 718
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 691 TGATGAAATGCTTGAAATCGATAAGAGATTACGCGTTTTCTAGTTCGCCTTATCCGGTTA 750
Query 719 TTATCACTTTAGAAGATCATCTTACACCTGATCTTCAAGCCAAAGTTGCTGAGATGGCTA 778
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 751 TCATCACTTTAGAGGATCATCTTACACCTGATCTTCAAGCCAAAGTTGCTGAGATGGCTA 810
Query 779 CACAGATATTTGGGCAGATGTTGTATTACCCTGAATCAGATAGCTTAGTGGAATTTCCTT 838
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 811 CACAGATATTTGGGCAGATGTTGTATTACCCTGAATCAGATAGCTTACTGGAATTTCCTT 870
Query 839 CTCCTGCTTCACTGCTTCATCGGATAATCATCTCAACCAAACCGCCTAAAGAGTATCTCG 898
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 871 CTCCTGCTTCACTGCTTCATCGGATAATCATCTCCACCAAACCGCCTAAAGAATATCTCG 930
Query 899 AATCGAGGAATCCGATTGTTAAACAGAAGGATAATAATGTATCTCCATCGTCCGAGGAAG 958
|||||||||| |||||||||||||| ||||||||||||||||||||||| || ||||| |
Sbjct 931 AATCGAGGAACCCGATTGTTAAACAAAAGGATAATAATGTATCTCCATCTTCAGAGGATG 990
Query 959 AAACACCTAGAACAGAGGAGATTCAGACACTAGAAAGTATGTTGTTTGACCAAGATTTTG 1018
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 991 AAACACCTAGAACAGAGGAGATTCAGACCCTAGAAAGTATGTTGTTTGACCAAGATTTTG 1050
Query 1019 AAAGCAAGAGTGATAGTGATCAAGAGGATGAAGAGGCTAGTGAAGATCAGAAACCTGCAT 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1051 AAAGCAAGAGTGATAGTGATCAAGAGGATGAAGAGGCTAGTGAAGATCAGAAACCTGCAT 1110
Query 1079 ACAAACGGTTGATCACCATTCATGCAGGGAAACCAAAGGGAACGGTGAAAGAAGAGATGA 1138
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1111 ACAAACGGTTGATCACGATTCATGCTGGGAAACCAAAGGGAACGGTGAAAGAAGAGATGA 1170
Query 1139 AAGTTGTGGTGGATAAAGTGAGACGTTTGAGTTTAAGCGAGCAGGAACTTGACAGGACTT 1198
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1171 AAGTTGTGGTTGATAAAGTGAGACGTTTGAGTTTAAGCGAGCAGGAACTTGACAGGACTT 1230
Query 1199 GTTCATCCAATAGTCAGGATGTTGTAAGGTTTACACAGCGGAATTTGCTTCGGATATACC 1258
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1231 GTTCATCTAATAGTCAGGATGTTGTAAGGTTTACGCAGCGGAATTTGCTTCGGATATACC 1290
Query 1259 CTAAAGGGACAAGATTTAACTCCTCAAACTACAAACCTCTTATCGGTTGGACTCACGGAG 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1291 CTAAAGGGACAAGATTTAACTCCTCAAACTACAAACCTCTTATCGGTTGGACTCACGGAG 1350
Query 1319 CGCAAATGATTGCATTCAACATGCAGGGATATGGGAAATCTCTGTGGTTGATGCACGGCA 1378
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1351 CGCAAATGATTGCTTTCAACATGCAGGGATATGGGAAATCTCTGTGGTTGATGCACGGTA 1410
Query 1379 TGTTTAGAGCCAATGGAGGTTGTGGATATGTCAAGAAACCTAACTTCTTGATGAAGAAAG 1438
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1411 TGTTTAGAGCCAATGGAGGTTGTGGATATGTCAAAAAACCTAACTTCTTGATGAAGAAAG 1470
Query 1439 GGTTTCACGACGAAGTCTTTGACCCTAGGAAGAAACTCCCTGTGAAAGAAACGTTAAAGG 1498
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1471 GGTTTCACGATGAAGTCTTTGACCCTAGGAAGAAACTCCCTGTTAAAGAAACGTTAAAGG 1530
Query 1499 TGAAAGTGTATATGGGAGATGGATGGCGTATGGACTTCAGTCACACTCACTTTGACGCAT 1558
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1531 TGAAAGTGTATATGGGAGATGGATGGCGTATGGACTTCAGTCATACTCACTTTGATGCAT 1590
Query 1559 ATTCTCCTCCTGATTTCTACACTAAGATGTTCATAGTGGGTGTACCAGCGGATAACGCGA 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1591 ATTCTCCTCCTGATTTCTACACTAAGATGTTCATAGTGGGTGTACCAGCGGATAACGCGA 1650
Query 1619 AAAAGAAGACAAAAATAATCGAAGACAATTGGTATCCAATTTGGGATGAGGAATTTAGTT 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1651 AAAAGAAGACAAAAATAATCGAAGACAATTGGTATCCAATTTGGGATGAGGAATTCAGCT 1710
Query 1679 TCCCATTAACCGTTCCAGAGCTTGCATTGCTTAGGATCGAAGTAAGAGAGTATGATATGT 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1711 TCCCATTAACCGTTCCAGAGCTTGCATTGCTTAGGATCGAAGTAAGAGAGTATGATATGT 1770
Query 1739 CGGAGAAGGATGATTTTGGGGGACAAACATGCTTGCCTGTTGCAGAATTAAGACCGGGGA 1798
||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||
Sbjct 1771 CGGAGAAGGATGATTTTGGTGGACAAACATGCTTGCCTGTTGCAGAGTTAAGACCAGGGA 1830
Query 1799 TTCGATCTGTGCCATTGTATGATAAAAAGGGTGAGAAAATGAAATCAGTACGGCTTCTTA 1858
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1831 TTCGATCTGTGCCTTTGTATGACAAAAAGGGTGAGAAAATGAAATCAGTACGGCTTCTTA 1890
Query 1859 TGCGTTTCATCTTCGAATGATTTGGCTTAACAGAAATGTGT 1899
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1891 TGCGTTTCATCTTCGAATGATTTGGCTTAACAGAAATGTGT 1931
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94025620785
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5