BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg934819

Length=911
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G22090.1 | Symbols: emb2204 | Protein of unknown function (D...  58.4    1e-07


> AT1G22090.1 | Symbols: emb2204 | Protein of unknown function 
(DUF626) | chr1:7795708-7797425 FORWARD LENGTH=1176
Length=1176

 Score = 58.4 bits (31),  Expect = 1e-07
 Identities = 33/34 (97%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  600  GGTGAAGGAATCAGAGTTGCGAGACAATGAATGG  633
            |||||||||||||||||||||||||||||| |||
Sbjct  526  GGTGAAGGAATCAGAGTTGCGAGACAATGATTGG  559



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 44507454242


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5