BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934822 Length=1381 Score E Sequences producing significant alignments: (Bits) Value AT2G40270.1 | Symbols: | Protein kinase family protein | chr2:... 1855 0.0 AT3G56050.1 | Symbols: | Protein kinase family protein | chr3:... 656 0.0 > AT2G40270.1 | Symbols: | Protein kinase family protein | chr2:16821934-16824506 REVERSE LENGTH=1851 Length=1851 Score = 1855 bits (1004), Expect = 0.0 Identities = 1243/1351 (92%), Gaps = 46/1351 (3%) Strand=Plus/Plus Query 65 GAAAGCTTTTGGATTTCACAGGAAAACACTTGTCCGTTACCCTTACAAAGATTTACCTTC 124 ||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||| Sbjct 332 GAAAGCTTTTGGATTTCACAGGAAAACACTTGTCCGTAACCCTTACAAAGACTTGCCTTC 391 Query 125 GAGAAAAGACCGCAAAAACCGTGTTGTGGCTGCAACTATAACACCATCATCGTCACCACA 184 ||||||||||||||||||||||||||||||||||||| |||||||||||| || ||| | Sbjct 392 AAGAAAAGACCGCAAAAACCGTGTTGTGGCTGCAACTACAACACCATCATCATCCCCAGA 451 Query 185 ACCTTCTCCTAAACATGTTTCAACTAAATCTTCAACAGTTCCGGAGCCACAAAAGAGATC 244 |||| |||| |||||||||||||||||| ||||||||||| | ||||||||||||||||| Sbjct 452 ACCTGCTCCAAAACATGTTTCAACTAAAGCTTCAACAGTTTCAGAGCCACAAAAGAGATC 511 Query 245 ATCTACACAAGATGTTTCACCTTCTCCTTCGGTGTCACTTGTAAATC-CTTCCACTCCAA 303 ||||||||||||||||||||||||||| || | | |||||| ||| | || ||| ||||| Sbjct 512 ATCTACACAAGATGTTTCACCTTCTCCATCTGCGCCACTTGCAAA-CTCTCCCATTCCAA 570 Query 304 GAAACGCACATTCTTCTTCAGTGGCTGTTCCTTTAGTAGTTGGCTGCGTAGGCGGTGCCT 363 ||||| | || ||| | | ||||||||||||| |||||||||||||||||||| | Sbjct 571 GAAACTCTCA---TTC-T---T--CTGTTCCTTTAGTTGTTGGCTGCGTAGGCGGTGCTT 621 Query 364 TTTTTCTTCTCCTTGTAGCTACCGGTCTCTACTTTTTCACTAGTAAGGCCGGGAAAACTG 423 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 622 TTTTTCTTCTCCTTGTAGCTACCGGTCTCTACTTTTTCACAAGTAAGGCCGGGAAAACTG 681 Query 424 TGAATCCTTGGCGTACTGGTCTTAGTGGACAAC-TCAG--A--A------A---GTATT- 468 ||||||||||||||||||||||||||||||||| |||| | | | ||||| Sbjct 682 TGAATCCTTGGCGTACTGGTCTTAGTGGACAACTTCAGAAAGTATTCGTTACTGGTATTC 741 Query 469 C-GT--T------A-CT--GATTGAAGCTGCATGTGAAGATTTTAGTAATGTCATTGGAT 516 | || | | || ||||||||||||||||||||||||||||||||||||||||| Sbjct 742 CTGTACTCAAAAGATCTGAGATTGAAGCTGCATGTGAAGATTTTAGTAATGTCATTGGAT 801 Query 517 CTTGCCCCATTGGGAAATTGTTCAAAGGAACATTATCAAGTGGAGTGGAGATTGCTGTTG 576 |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 802 CTTGTCCCATTGGGAAGTTGTTCAAAGGAACATTATCAAGTGGAGTGGAGATTGCTGTTG 861 Query 577 CTTCTTTTGCTACTACCT-CTGCCAAAGACTGGAAGGACAATACAGAAATTCACTTTAGG 635 ||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| ||| Sbjct 862 CTTCTTTTGCTACTA-CTACTGCCAAAGACTGGAAGGACAGTACAGAAATTCACTTCAGG 920 Query 636 AAGAAGATCGAAATGTTATCGAAGATCAACCACAAGAATTTTGCAAACCTTCTTGGGTAT 695 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 921 AAGAAGATCGAAATGTTATCGAAGATCAACCACAAGAATTTTGCAAACCTTCTTGGTTAT 980 Query 696 TGTGAAGAAAAGGAACCTTTCGCTAGGATCTTGATCTTTGAGTATGCTCCAAATGGATCA 755 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 981 TGTGAAGAAAAGGAACCTTTCACCAGGATCTTGATCTTTGAGTATGCTCCAAATGGATCA 1040 Query 756 CTCTTTGAGCATTTACACTT-TAAAGAATCAGAACACTTGGATTGGGGAATGCGGTTAAG 814 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 1041 CTCTTTGAGCATTTACA-TTATAAAGAATCAGAACACTTGGATTGGGGAATGCGGTTAAG 1099 Query 815 AATTGCAATGGGATTAGCATATTGCCTTGACCATATGCACCAACTCAATCCACCTATAGC 874 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1100 AATTGCAATGGGATTAGCATATTGCCTTGACCATATGCACCAACTCAATCCACCTATAGC 1159 Query 875 TCACACCAATCTCGTCTCGTCATCTCTTCAGCTCACAGAGGATTATGCTGTCAAAGTATC 934 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1160 TCACACCAATCTCGTCTCATCATCTCTTCAGCTCACAGAGGATTATGCTGTCAAAGTATC 1219 Query 935 GGATTTCAGTTTCGGTCCATCTGAGACAGAGACTAGCATCAACGACA-CA--GTCATAGA 991 ||||||||||||||| |||||||||||||||||| ||||||| ||| || |||||||| Sbjct 1220 AGATTTCAGTTTCGGTTCATCTGAGACAGAGACTAACATCAACAACAACACAGTCATAGA 1279 Query 992 CACAAACATCTCAGTCTTGAATCCAGAAGAAAACGTTTACAGCTTCGGTTTACTATTATT 1051 |||| ||||||||| ||||||||||||||| ||| |||||||||| |||||||| ||||| Sbjct 1280 CACACACATCTCAGCCTTGAATCCAGAAGACAACATTTACAGCTTTGGTTTACTGTTATT 1339 Query 1052 CGAAATGATAAGCGGGAAACTCCCAGAATCGGTTAACAAACCTGACTCGGTAGATAGCGC 1111 ||||||||||| |||||||||| |||||| ||||||||||||||||| ||||||||| | Sbjct 1340 CGAAATGATAACCGGGAAACTCATAGAATCCGTTAACAAACCTGACTCAGTAGATAGCTC 1399 Query 1112 GCTGGTTGATTTCTTAAGAGGAGAGACTCTAGCCAAGATGGTAGATCCAACACTGGAATC 1171 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1400 GCTGGTTGATTTCTTAAGAGGAGAGACTCTAGCCAAAATGGTAGATCCAACACTGGAATC 1459 Query 1172 TTATGATGACAAGATTGAGAATATAGGTGAAGTGATCAAATCATGCCTCAGGACCGACCC 1231 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 1460 TTATGATGCCAAGATTGAGAATATAGGTGAAGTGATCAAATCATGCCTTAGGACTGACCC 1519 Query 1232 GAAAGAGAGACCTACAATGCGGGAAGTCACAGGATGGTTACGGGAGATCACGGGAATATC 1291 |||||||||||||||||||| ||||||||||||||||||||||||||||||||| | || Sbjct 1520 GAAAGAGAGACCTACAATGCAAGAAGTCACAGGATGGTTACGGGAGATCACGGGATTGTC 1579 Query 1292 ACCGAATGATGCTACGCCGAAATTGTCACCTCTTTGGTGGGCAGAGTTGGAGGTTTTGTC 1351 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1580 ACCGAACGATGCTACACCGAAATTGTCACCTCTTTGGTGGGCAGAGTTGGAGGTTTTGTC 1639 Query 1352 CACGGCTTAAGAGAGGCCC-TTCACCAATAA 1381 |||||| |||||||| ||| ||||| ||||| Sbjct 1640 CACGGCGTAAGAGAGACCCCTTCACTAATAA 1670 > AT3G56050.1 | Symbols: | Protein kinase family protein | chr3:20797955-20800943 REVERSE LENGTH=2104 Length=2104 Score = 656 bits (355), Expect = 0.0 Identities = 747/927 (81%), Gaps = 64/927 (7%) Strand=Plus/Plus Query 476 GATTGAAGCTGCATGTGAAGATTTTAGTAATGTCATTGGATCTTGCCCCATTGGGAAATT 535 |||||||||||| |||||||||||||||||||||||||| |||||||||||||| | ||| Sbjct 843 GATTGAAGCTGCCTGTGAAGATTTTAGTAATGTCATTGGGTCTTGCCCCATTGGTACATT 902 Query 536 GTTCAAAGGAACATTATCAAGTGGAGTGGAGATTGCTGTTGCTTCTTTTGCTACTACCTC 595 ||||||||| || |||||||||| |||||||| ||||| |||||| |||||||| | || Sbjct 903 GTTCAAAGGGACGCTATCAAGTGGGGTGGAGATAGCTGTGGCTTCTGTTGCTACTGCGTC 962 Query 596 TGCCAAAGACTGGA-AGGACAATACAGAAATTCACTTTAGGAAGAAGATCGAAATGTTAT 654 ||||||||| |||| | | |||| |||||| || || || ||||||||||||||||||| Sbjct 963 TGCCAAAGAATGGACA-AATAATATAGAAATGCAGTTCAGAAAGAAGATCGAAATGTTAT 1021 Query 655 CGAAGATCAACCACAAGAATTTTG-CAAACCTTCTTGGGTATTGTGAAGAA-AAGGAACC 712 | ||||| |||||||||||||||| | ||||||||||| || ||||||||| || ||||| Sbjct 1022 CCAAGATAAACCACAAGAATTTTGTC-AACCTTCTTGGTTACTGTGAAGAAGAA-GAACC 1079 Query 713 TTTCGCTAGGATCTTGATCTTTGAGTATGC-TCCAAATGGATCACTCTTTGAGCATTTAC 771 |||| ||||||||||| ||||||| ||||| | |||| ||| || ||||||| ||||||| Sbjct 1080 TTTCACTAGGATCTTGGTCTTTGAATATGCAT-CAAACGGAACAGTCTTTGAACATTTAC 1138 Query 772 ACTTTAAAGAATCAGAACACTTGGATTGGGGAATGCGGTTAAGAATTGCAATGGG-ATTA 830 ||| ||||||||||||||||||||| |||| ||||||| ||||||| |||||||| | || Sbjct 1139 ACTATAAAGAATCAGAACACTTGGACTGGGTAATGCGGCTAAGAATAGCAATGGGCA-TA 1197 Query 831 GCATATTGCCTTGACCATATGCACCAACTCAATCCACCTATAGCT-CACACCAATC-TCG 888 || ||||||||||||||||||||| |||||| |||||||||| | |||| ||||| || Sbjct 1198 GCTTATTGCCTTGACCATATGCACGGACTCAAGCCACCTATAG-TCCACAGCAATCTTC- 1255 Query 889 TCTCGTCATCTCTTCAGCTCACAGAGGATTATGCTGTCAAAGTAT-CGGATTTC-A---- 942 |||| ||||| |||| ||||||||||| || || |||||| | | |||||||| | Sbjct 1256 TCTCATCATCAGTTCAACTCACAGAGGACTACGCAGTCAAAAT-TGCGGATTTCAATTTT 1314 Query 943 -G---TTT---CGGTCCATCTGAGACAGAGA-CTAGCATCAACGACACAGTCATAGACAC 994 | ||| || ||||| |||||||| | | |||| ||| | ||| ||||||| || Sbjct 1315 GGATATTTAAAAGGCCCATCCGAGACAGAAAGC-AGCACCAATG-CAC--TCATAGATAC 1370 Query 995 AAACATCTCAGTCTTGAATC-C-AGAAGAAAACGTTTACAGCTTCGGTTTACTATTATTC 1052 ||||||||||| || | | |||||| || ||| |||||||||| || || || || Sbjct 1371 AAACATCTCAG-AAACAA-CACAAGAAGACAATGTTCACAGCTTCGGGTTGCTGTTGTTT 1428 Query 1053 GAAATGATAAGC-GGGAAACTCCCAGAATCGGTT-AACAAACCTGACTCGGTAGATAGCG 1110 ||| |||| | | || ||||||||||| || ||| || ||| ||||||| |||||| || Sbjct 1429 GAACTGATGA-CAGGAAAACTCCCAGAGTCAGTTCAA-AAAGGTGACTCGATAGATACCG 1486 Query 1111 CG-CTGGTTGAT-TTCTTAAGAGGAGAGAC-TCT-AGCCAAGATGGTAGATCCAAC-ACT 1165 | ||| || | ||||| |||||| |||| | | || ||||||| ||||| || | | Sbjct 1487 -GATTGGCTG-TCTTCTTGAGAGGAAAGACAT-TAAG-GGAGATGGTGGATCCGACAATT 1542 Query 1166 GGAATCTTATGATGACAAGATTGAGAATATAGGTGAAGTGATCAAAT-CATGCCTCAGGA 1224 | || ||| ||| || |||||||||||||||||||||||||||||| | ||| | || | Sbjct 1543 GAAAGCTT-TGACGAGAAGATTGAGAATATAGGTGAAGTGATCAAAAGC-TGCATAAG-A 1599 Query 1225 CC-GACCCGAAAGAGAGACCTACAATGCGGGAAGTCACAGG-ATGGTTACGGGAGATCAC 1282 | ||| ||||| ||||||| | |||| |||||||||||| | | ||||| |||||||| Sbjct 1600 GCAGACGCGAAACAGAGACCGATAATGAAGGAAGTCACAGGGA-GATTACGAGAGATCAC 1658 Query 1283 GGGAATATCACC-GAATGATGCTA-CGCCGAAA-TTGTCACCTCTTTGGTGGGCAGAGTT 1339 ||| ||||||| || || ||| | || ||| || ||||| || |||||||||||| | Sbjct 1659 TGGATTATCACCAGAC-GACACTATC-CCAAAACTT-TCACCACTCTGGTGGGCAGAGCT 1715 Query 1340 GGAGGTTTTGTCCACGGCTT-AAGAGA 1365 ||| ||| ||||||| || | |||||| Sbjct 1716 GGAAGTTCTGTCCACTGCGTGAAGAGA 1742 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 68021738475 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5