BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg934940
Length=2359
Score E
Sequences producing significant alignments: (Bits) Value
AT2G41210.1 | Symbols: PIP5K5 | phosphatidylinositol- 4-phospha... 4078 0.0
AT3G56960.1 | Symbols: PIP5K4 | phosphatidyl inositol monophosp... 2429 0.0
> AT2G41210.1 | Symbols: PIP5K5 | phosphatidylinositol- 4-phosphate
5-kinase 5 | chr2:17173413-17176807 FORWARD LENGTH=2765
Length=2765
Score = 4078 bits (2208), Expect = 0.0
Identities = 2309/2359 (98%), Gaps = 2/2359 (0%)
Strand=Plus/Plus
Query 2 GTTTCCTTAGTTTAACATAATGAGCAAGGACCAAAGCTATGTTCTAAAAGCATGGGAGGT 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 196 GTTTCCTTAGTTTAACATAATGAGCAAGGACCAAAGCTATGTTCTAAAAGCATGGGAGGT 255
Query 62 GACCGTGCGAAAGACTCAGCAAGCCAAGAAGCGGGCAAATAGCGTTTTTGGAACAGTATC 121
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 256 GACCGTGCGAAAGACTCAGCAAGCGAAGAAGCGGGCTAATAGCGTTTTTGGAACAGTATC 315
Query 122 GGTAGCTCCACATACAGATAATGACACTACAACTGATGAAAATGACGATGAGACCACCAC 181
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 316 GGTAGCTCCACATACAGATAATGATACTACAACTGATGATAATGACGATGAGACCACCAC 375
Query 182 TAACAGGAGCAGCTCAGAGGAATTCTACCATGCTGAGAGAGTGCTTCCCAATGGGGACTA 241
|||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 376 TAACAGGAGCAGCTTAGAGGAATTCTACCATGCCGAGAGAGTGCTTCCCAATGGGGACTA 435
Query 242 CTACACAGGGCAATGGTATGATAATTTTCCTCATGGCCATGGGAAATACCTCTGGACAGA 301
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 436 CTACACGGGGCAATGGTATGATAGTTTTCCTCATGGCCATGGGAAATACCTCTGGACAGA 495
Query 302 CGGCTGCATGTACATCGGTGACTGGTACAATGGGAAAACCATGGGGAATGGAAAATTTGG 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 496 CGGCTGCATGTACATCGGTGACTGGTACAATGGGAAAACCATGGGGAATGGAAAGTTTGG 555
Query 362 GTGGCCATCTGGTGCCACATACGAAGGAGAGTTTAAAAGTGGTTACATGGATGGTATTGG 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 556 GTGGCCATCTGGTGCCACATACGAAGGAGAGTTTAAAAGTGGTTACATGGATGGTATTGG 615
Query 422 GACGTACACAGGTCCAAGTGGAGATGCTTATAAAGGTCAGTGGGTGATGAACCTGAAGCA 481
||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 616 GACATACACGGGTCCGAGTGGAGATGCTTATAAAGGTCAGTGGGTGATGAACCTGAAGCA 675
Query 482 TGGACATGGCGTCAAGAGTTTTGCAAATGGAGATGCCTATGATGGTGAATGGAGGAGAGG 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 676 TGGACATGGCGTCAAGAGTTTTGCAAATGGAGATGCCTATGATGGTGAATGGAGGAGAGG 735
Query 542 TTTGCAAGAAGGTCAAGGAAAGTATCAATGGAGCGATGGGAGCTATTACATCGGTGAATG 601
|||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||
Sbjct 736 TTTGCAAGAAGGTCAAGGAAAGTACCAATGGAGCGATGGGAGTTATTACATCGGCGAATG 795
Query 602 GAAGAATGGTACGATCTGTGGCAAAGGGAGTTTTGTTTGGACAAATGGAAATAGGTACGA 661
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 796 GAAGAATGGTACGATCTGTGGCAAAGGGAGTTTTGTTTGGACAAATGGAAATAGATACGA 855
Query 662 CGGTTTTTGGGATGAAGGGTTCCCCAGAGGGAATGGGACGTTCAAATGGGACAATGGGAG 721
||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 856 CGGGTTTTGGGATGAAGGGTTCCCCAGAGGGAATGGGACCTTCAAATGGGATAATGGGAG 915
Query 722 TTTCTATGTTGGCCATTGGTCCAAGGATCCAGAGGAAATGAACGGTACTTATTATCCGTC 781
||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||
Sbjct 916 TTTCTATGTTGGCCATTGGTCTAAGGATCCAGAGGAAATGAATGGTACATATTATCCGTC 975
Query 782 AGGAAATGAAGGGAATCTTGAATGGGATCCTAAAGATTTGTTTAATAATCTTAGTGAGTA 841
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 976 AGGAAATGAAGGGAATCTTGAATGGGATCCTAAAGATTTGTTTAATAATCTAAGTGAGTA 1035
Query 842 CACGATCTGCAGCGGCGAGAGGGTTCCTACGTTGCCTTCACAGAAGAAACTATCTGTTTG 901
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1036 CACGATCTGCAGCGGCGAGAGGGTTCCTACATTGCCTTCACAGAAGAAACTATCTGTTTG 1095
Query 902 GAACTCTTCCAAGCGTATAGAGAAACCTAGGAGGACGTCGGTTGATGGGAGGGTAAGTGT 961
||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1096 GAACTCTTCCAAGCGGATAGAGAAACCTAGGAGGACGTCAGTTGATGGGAGAGTAAGTGT 1155
Query 962 GGGCGTTGATAGAGCGTTTGAGAAGATGAATATGTGGGGGAACGAAATCGGTGAAGGAGG 1021
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1156 GGGCGTTGATAGAGCGTTTGAGAAGATGAATATGTGGGGGAACGAAATCGGTGAAGGAGG 1215
Query 1022 TGCTGATATGAGGAAGGAGTTGGATGCAGAGTTGATGAGATTGGACGCTGAAGGTATTCA 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1216 TGCTGATATGAGGAAGGAGTTGGATGCAGAGTTGATGAGATTGGACGCTGAAGGTCTTCA 1275
Query 1082 GAGCCTGAAGTCGAGCCCTGTTCCTATGAAACTGCCAAAGGCAGGGAGGAAACAAGGGGA 1141
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1276 GAGCCTGAAATCGAGCCCTGTTCCTATGAAACTGCCAAAGGCAGGGAGGAAGCAAGGGGA 1335
Query 1142 GACGATATCCAAAGGCCATCGCAATTACGAGCTTATGCTTAATCTACAGTTAGGAATCAG 1201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1336 GACGATATCCAAAGGCCATCGCAATTACGAGCTTATGCTTAATCTACAGTTAGGAATCAG 1395
Query 1202 GCATTCTGTCGGAAGACAAGCTCCAGCGGCATCTCTTGATCTGAAGCCTTCAGCTTTCGA 1261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1396 GCATTCTGTCGGAAGACAAGCTCCAGCGGCATCTCTTGATCTGAAGCCTTCAGCTTTCGA 1455
Query 1262 TCCAAAAGATAAGATATGGAGGAGGTTTCCGCGCGAAGGAACCAAGTACACACCTCCACA 1321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1456 TCCAAAAGATAAGATATGGAGGAGGTTTCCGCGCGAAGGAACCAAGTACACACCTCCACA 1515
Query 1322 TCAGTCTACTGAATTCAAATGGAAAGATTATTGCCCACTAGTTTTCAGGAGCTTGAGGAA 1381
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1516 TCAATCTACTGAATTCAAATGGAAAGATTATTGCCCACTAGTTTTCAGGAGCTTGAGGAA 1575
Query 1382 GCTATTCAAAGTCGACCCAGCTGATTACATGTTATCTATCTGTGGGAATGATGCCCTTCG 1441
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1576 GCTATTCAAAGTAGACCCAGCTGATTACATGTTATCGATCTGTGGGAATGATGCCCTTCG 1635
Query 1442 AGAACTATCATCCCCTGGAAAAAGTGGGAGCtttttttATTTAACAAACGATGATCGTTA 1501
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1636 AGAACTATCATCCCCTGGAAAAAGTGGGAGTTTTTTTTATTTAACAAACGATGATCGTTA 1695
Query 1502 CATGATAAAAACAATGAAGAAGTCGGAAACAAAAGTGCTTCTGGGGATGCTTGCAGCATA 1561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1696 CATGATAAAAACAATGAAGAAGTCGGAAACAAAAGTGCTTCTGGGGATGCTTGCAGCATA 1755
Query 1562 TTATAACCATGTTCGAGCATTTGAGAACTCTTTGGTAATCAGATTCTTTGGTCTACACTG 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1756 TTATAACCATGTTCGAGCATTTGAGAACTCTTTGGTAATCAGATTCTTTGGTCTACACTG 1815
Query 1622 TGTGAAATTGAATGGACCAACCCAAAAGAAGGTGCGATTCGTCATTATGGGTAATCTGTT 1681
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1816 TGTGAAATTGAATGGACCAACCCAAAAGAAGGTCCGATTCGTCATTATGGGTAATCTGTT 1875
Query 1682 TTGTTCTAAGTACTCTGTTCACAGACGCTTTGATCTAAAAGGATCTTCTCTTGGCCGTAC 1741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1876 TTGTTCTAAGTACTCTGTTCACAGACGCTTTGATCTAAAAGGATCTTCTCTTGGCCGTAC 1935
Query 1742 AACTGACAAACCTGAATCAGAAATCGATTCAAACACGATCTTAAAAGACCTCGACCTGAA 1801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1936 AACTGACAAACCTGAATCAGAAATCGATTCAAACACGATCTTAAAAGACCTCGACCTGAA 1995
Query 1802 TTTCATTTTCAGATTGCAGAAAGCATGGTACCAAGAATTCATCAGGCAAATCGATAAAGA 1861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 TTTCATTTTCAGATTGCAGAAAGCATGGTACCAAGAATTCATCAGGCAAATCGATAAAGA 2055
Query 1862 CTGCGAGTTTCTAGAACAGGAGAGAATCATGGATTACAGTCTTCTAGTTGGGATTCACTT 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2056 CTGCGAGTTTCTAGAACAGGAGAGAATCATGGATTACAGTCTTCTAGTTGGGATTCACTT 2115
Query 1922 CAGAGAAGCTTCTGTCGCTGGAGAGCTGATTCCTTCTGGAGCTCGAACACCTATTGGTGA 1981
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 2116 CAGAGAAGCTTCTGTCGCTGGAGAGCTGATTCCTTCTGGAGCTCGAACGCCCATTGGTGA 2175
Query 1982 ATCAGAAGAAGAATCAGGCCCTCGTCTTTCTAGAGCAGAGGTTGATGAGCTTCTTTCAGA 2041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2176 ATCAGAAGAAGAATCAGGCCCTCGTCTTTCTAGAGCAGAGGTTGATGAGCTTCTTTCAGA 2235
Query 2042 TCCCTCTAGGTGGGCAAGTATTAGATTGGGGACCAACATGCCAGCGCGTGCAGAGAGAAC 2101
|||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 2236 TCCCTCAAGGTGGGCAAGTATTAGATTGGGGACAAACATGCCAGCACGTGCAGAGAGAAC 2295
Query 2102 AATGAGAAAGAACGACTGTGAGCTTCAGCTTGTGGGAGAACCTACAGGAGAGTTCTACGA 2161
|||||||| |||||| | ||||| |||||||||||||| ||||||||||||||||||||
Sbjct 2296 GATGAGAAAAAACGACAGCGAGCTGCAGCTTGTGGGAGAGCCTACAGGAGAGTTCTACGA 2355
Query 2162 AGTGGTGATGATATTTGGCATAATTGACATTCTTCAGGATTATGATATCAGCAAGAAGCT 2221
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2356 AGTGGTGATGATATTTGGTATAATTGACATTCTTCAGGATTATGATATCAGCAAGAAGCT 2415
Query 2222 TGAACACGCTTACAAGAGCATACAGTATGATCCTTCCTCTATATCTGCGGTTGATCCGAG 2281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2416 TGAACACGCTTACAAGAGCATACAGTATGATCCTTCCTCTATATCTGCGGTTGATCCGAG 2475
Query 2282 ACAATACTCGAGGCGTTTCCGTGACTTTATCTTCAAGGTCTTCACAGATGACAATTGAGA 2341
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2476 ACAATACTCTAGGCGTTTCCGTGACTTTATCTTCAAGGTCTTCACAGATGACAATTGAGA 2535
Query 2342 TGGTCTCAA-TATGTCTCT 2359
||||||||| | |||||||
Sbjct 2536 TGGTCTCAAGT-TGTCTCT 2553
> AT3G56960.1 | Symbols: PIP5K4 | phosphatidyl inositol monophosphate
5 kinase 4 | chr3:21080957-21083885 FORWARD LENGTH=2340
Length=2340
Score = 2429 bits (1315), Expect = 0.0
Identities = 2018/2356 (86%), Gaps = 53/2356 (2%)
Strand=Plus/Plus
Query 21 ATGAGCAAGGACCAAAGCTATGTTCTAAAAGCATGGGAGGTGACCGTGCGAAAGACTCAG 80
||||||||||| ||||||| ||||||||| || |||||||||||||| ||||||| ||
Sbjct 1 ATGAGCAAGGAACAAAGCTGTGTTCTAAAGGCTTGGGAGGTGACCGTAAGAAAGACCCAA 60
Query 81 CAAGCCAAGAAGCGGGCAAATAGCGTTTTTGGAACAGTATCGGTAGCTCCACATACAGAT 140
||||| |||||||| ||||| ||| ||||||| || ||||| ||||||||||| ||||||
Sbjct 61 CAAGCGAAGAAGCGTGCAAACAGCATTTTTGGGACGGTATCTGTAGCTCCACAGACAGAT 120
Query 141 -A--ATG--AC-ACTACAACTGATGAAAATGACGATGAGACCACCACTAACAGGAGCAGC 194
| ||| || ||||| ||||| || ||||| |||||||||| ||||||||| ||||||
Sbjct 121 GATGATGCTACTACTACGACTGAGGAGAATGATGATGAGACCAGCACTAACAGAAGCAGC 180
Query 195 -TCAGAGGAATTCTACCATGCTGAGAGAGTGCTTCCCAATGGGGACTACTACACAGGGCA 253
| || |||||| |||||||| |||||| | ||||| ||||| ||||| || ||||||||
Sbjct 181 AT-AGGGGAATTGTACCATGCAGAGAGAATACTTCCTAATGGAGACTATTATACAGGGCA 239
Query 254 ATGGTATGATAATTTTCCTCATGGCCATGGGAAATACCTCTGGACAGACGGCTGCATGTA 313
||||||||||| ||||||||| || |||||||| || || |||||||| || ||||||||
Sbjct 240 ATGGTATGATAGTTTTCCTCACGGGCATGGGAAGTATCTTTGGACAGATGGTTGCATGTA 299
Query 314 CATCGGTGACTGGTACAATGGGAAAACCATGGGGAA-TGGAAAATTTGGGTGGCCATCTG 372
||| |||||||||||||| ||||| || || ||||| || || || |||||||| ||||
Sbjct 300 CATTGGTGACTGGTACAACGGGAAGACTAT-GGGAAGAGGGAAGTTCGGGTGGCCTTCTG 358
Query 373 GTGCCACATACGAAGGAGAGTTTAAAAGTGGTTACATGGATGGTATTGGGAC-GTACACA 431
|||||||||| ||||| || || |||||||| |||||||||||| || || | ||||||
Sbjct 359 GTGCCACATATGAAGGCGAATTCAAAAGTGGATACATGGATGGTGTT-GGCCTTTACACA 417
Query 432 GGTCCAAGTGGAGATGCTTATAAAGGTCAGTGGGTGATGAACCTGAAGCATGGACATGGC 491
||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct 418 GGTCCTAGTGGAGATACTTATAAAGGTCAGTGGGTGATGAACCTGAAACATGGACATGGA 477
Query 492 GTCAAGAGTTTTGCAAATGGAGATGCCTATGATGGTGAATGGAGGAGAGGTTTGCAAGAA 551
||||| |||| || |||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 478 ATCAAGCGTTTCGCGAATGGAGATGTGTATGATGGTGAATGGAGGAGGGGTTTGCAAGAA 537
Query 552 GGTCAAGGAAAGTATCAATGGAGCGATGGGAGCTATTACATCGGTGAATGGAAGAATGGT 611
| |||||||||||||| ||||| ||||||||||||||||| || ||||||||||| | |
Sbjct 538 GCCCAAGGAAAGTATCAGTGGAGAGATGGGAGCTATTACATGGGGGAATGGAAGAACGCT 597
Query 612 ACGATCTGTGGCAAAGGGAGTTTTGTTTGGACAAATGGAAATAGGTACGACGGTTTTTGG 671
||||||||||||||||| | |||| ||||||| |||| ||||| |||||||| ||||||
Sbjct 598 ACGATCTGTGGCAAAGGTACTTTTATTTGGACGGATGGGAATAGATACGACGGATTTTGG 657
Query 672 GATGAAGGGTTCCCCAGAGGGAATGGGACGTTCAAATGGGAC-AATGGGAGTTTCTATGT 730
||||| || || || ||||| || || || |||||||||| | ||||||||||||| ||
Sbjct 658 GATGACGGTTTTCCTAGAGGAAACGGTACTTTCAAATGGG-CTGATGGGAGTTTCTACGT 716
Query 731 TGGCCATTGGTCCAAGGATCCAGAGGAAATGAACGGTACTTATTATCCGTCAGGAAATGA 790
||| |||||||| || ||||| || || |||||||||||||||||||| |||||| | ||
Sbjct 717 TGGTCATTGGTCTAATGATCCGGAAGAGATGAACGGTACTTATTATCCATCAGGAGACGA 776
Query 791 AGGGAATCTTGAATGGGATCCTAAAGATTTGTTTAATAATCTTAGTGAGTACACGATCTG 850
|||| || |||||||||||||||||| |||||| |||||| |||||||||| ||||||
Sbjct 777 CGGGAGTCCTGAATGGGATCCTAAAGACGTGTTTACTAATCTGAGTGAGTACAAGATCTG 836
Query 851 CAGCGGCGAGAGGGTTCCTACGTTGCCTTCACAGAAGAAA-CTATCTGTTTGGAACTCTT 909
|||||| ||||| |||||| ||||||||||||||| ||| |||||||||||||||||||
Sbjct 837 CAGCGGAGAGAGAGTTCCTGTGTTGCCTTCACAGAA-AAAGCTATCTGTTTGGAACTCTT 895
Query 910 CCAAGCGTATAGAGAAACCTAGGAGGACGTCGGTTGATGGGAGGGTAAGTGTGGGCGTTG 969
|||| ||| | |||||||| ||||||| ||| ||||| ||||||||||||||||| || |
Sbjct 896 CCAAACGTGTCGAGAAACCGAGGAGGATGTCTGTTGACGGGAGGGTAAGTGTGGGTGTAG 955
Query 970 ATAGAGCGTTTGAGAAGATGAATATGTGGGGGAA-CGAAATCGGTGAAGGAGGTGCTG-- 1026
||||||||||||||||||||||||||| |||||| ||||| ||| ||||| | |||||
Sbjct 956 ATAGAGCGTTTGAGAAGATGAATATGT-GGGGAACCGAAAGCGGAGAAGGTGCTGCTGAT 1014
Query 1027 A-T-A-T-------GAGGAAGGAGTTGGATGCAGAGTTGATGAGATTGGACGCTGAA-GG 1075
| | | | ||||| ||| |||||||| || |||||||| | || |||||| ||
Sbjct 1015 ATTGATTCCACCACGAGGAGGGACTTGGATGCTGAAATGATGAGACTAGAGGCTGAAGGG 1074
Query 1076 -T-ATTCAGAGCCTGAAG-TCGAGCCCTGTTCCTATGAAACTGCCAAAGGCAGGGAGGAA 1132
| |||||||||||| || ||||||||| ||||||| | |||||| ||||||||||||
Sbjct 1075 TTCATTCAGAGCCTG-AGACCGAGCCCTGCACCTATGAGATTGCCAAGGGCAGGGAGGAA 1133
Query 1133 ACAAGGGGAGACGATATCCAAAGGCCATCGCAATTACGAGCTTATGCTTAATCTACAG-T 1191
||||| ||||||||||| |||||||| || ||||||||||||||||||||||||||| |
Sbjct 1134 GCAAGGCGAGACGATATCTAAAGGCCACCGGAATTACGAGCTTATGCTTAATCTACAGCT 1193
Query 1192 TAGGAATCAGGCATTCTGTCGGAAGACAAGCTCCAGCGGCATCTCTTGATCTGAAGCCTT 1251
| |||||||| ||| |||| |||| ||||||||| | | ||||||||||| |||| ||
Sbjct 1194 T-GGAATCAGACATGCTGTTGGAAAACAAGCTCCGGTTGTGTCTCTTGATCTTAAGCATT 1252
Query 1252 CAGCTTTCGATCCAAAAGATAAGATATGGAGGAGGTTTCCGCGC-GAAGGAACCAAGTAC 1310
| ||||| |||||||| || ||| |||||| || ||||| | | ||||||||||| |||
Sbjct 1253 CGGCTTTTGATCCAAAGGAGAAGGTATGGACAAGATTTCCAC-CAGAAGGAACCAAATAC 1311
Query 1311 ACACCTCCACATCAGTCTACTGAATTCAAATGGAAAGATTATTGCCCACTAGTTTTCAGG 1370
|||||||| ||||| |||| |||||||||||||||||| ||||||||| ||||||| |||
Sbjct 1312 ACACCTCCTCATCAATCTAGTGAATTCAAATGGAAAGACTATTGCCCATTAGTTTTTAGG 1371
Query 1371 AGCTTGAGGAAGCTATTCAAAGTCGACCCAGCTGATTACATGTTATCTATCTGTGGGAAT 1430
|||||||||||||||||||| || ||||||||||||||||||||||| ||||| ||||||
Sbjct 1372 AGCTTGAGGAAGCTATTCAAGGTAGACCCAGCTGATTACATGTTATCGATCTGCGGGAAT 1431
Query 1431 GATGCCCTTCGAGAACTATCATCCCCTGGAAAAAGTGGGAGCtttttttATTTAACAAAC 1490
||||||||||| || |||||||||||||| || ||||| |||||||| || || |||||
Sbjct 1432 GATGCCCTTCGGGAGCTATCATCCCCTGGTAAGAGTGGAAGCTTTTTCTACTTGACAAAT 1491
Query 1491 GATGATCGTTACATGATAAAAACAATGAAGAAGTCGGAAACAAAAGTGCTTCTGGGGATG 1550
|||||||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||
Sbjct 1492 GATGATCGTTACATGATAAAGACAATGAAGAAGTCTGAAACTAAAGTGCTTCTGAGGATG 1551
Query 1551 CTTGCAGCATATTATAACCATGTTCGAGCATTTGAGAACTCTTTGGTAATCAGATTCTTT 1610
|||||||||||||| |||||||||||||||||||||||| ||||||| || |||||||
Sbjct 1552 CTTGCAGCATATTACAACCATGTTCGAGCATTTGAGAACACTTTGGTCATTAGATTCTAC 1611
Query 1611 GGTCTACACTGTGTGAAATTGAA-TGGACCAACCCAAAAGAAGGTGCGATTCGTCATTAT 1669
||||| ||||||||||| || || |||||||| ||||||||||||||| || ||||||||
Sbjct 1612 GGTCTCCACTGTGTGAAGTT-AACTGGACCAATCCAAAAGAAGGTGCGGTTTGTCATTAT 1670
Query 1670 GGGTAATCTGTTTTGTTCTAAGTACTCTGTTCACAGACGCTTTGATCTAAAAGGATCTTC 1729
||| || || ||||||||| ||||||| | ||||||||||||||| | |||||||||||
Sbjct 1671 GGGAAACCTATTTTGTTCTGAGTACTCCATCCACAGACGCTTTGATTTGAAAGGATCTTC 1730
Query 1730 TCTTGGCCGTACAACTGACAAACCTGAATCAGAAATCGATTCAAACACGATCTTAAAAGA 1789
||||||||||||||| || ||||||||||| |||||| ||||||| || || || |||||
Sbjct 1731 TCTTGGCCGTACAACCGATAAACCTGAATCGGAAATCAATTCAAATACAATTTTGAAAGA 1790
Query 1790 CCTCGACCTGAATTTCATTTTCAGATTGCAGAAAGCATGGTACCAAGAATTCATCAGGCA 1849
|| || |||||||||||||| ||| | |||||||| |||||||||||||||||||||||
Sbjct 1791 TCTTGATCTGAATTTCATTTTTAGACTACAGAAAGCTTGGTACCAAGAATTCATCAGGCA 1850
Query 1850 AATCGATAAAGACTGCGAGTTTCTAGAACAGGAGAGAATCATGGATTACAGTCTTCTAGT 1909
| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1851 AGTCGACAAAGACTGCGAGTTTCTAGAACAGGAGAGAATAATGGATTACAGTCTTCTGGT 1910
Query 1910 TGGGATTCACTTCAGAGAAGCTTCTGTCGCTGGAGAGCTGATTCCTTCTGGAGCTCGAAC 1969
||||||||| |||||||| || || |||||||||||||||||||||||||||||||| ||
Sbjct 1911 TGGGATTCATTTCAGAGAGGCATCAGTCGCTGGAGAGCTGATTCCTTCTGGAGCTCGCAC 1970
Query 1970 ACCTATTGGTGAATCAGAAGAAGAATCAGGCCCTCGTCTTTCTAGAGCAGAGGTTGATGA 2029
|||||||||||||| ||||| ||||||| ||||||||| ||||||||||| || ||| |
Sbjct 1971 ACCTATTGGTGAATTTGAAGACGAATCAGCCCCTCGTCTCTCTAGAGCAGACGTGGATCA 2030
Query 2030 GCTTCTTTCAGATCCCT-CTAGGTGGGCAAGTATTAGA-TTGG-GGACCAACATGCCAGC 2086
|||||| || ||||| | | |||||||| ||||| ||| |||| || | |||||||| ||
Sbjct 2031 GCTTCTCTCTGATCC-TACAAGGTGGGCTAGTATCAGACTTGGAGG-C-AACATGCCGGC 2087
Query 2087 GCGTGCAGAGAGAACAATGAGAAAGAA-CGACTGTGAGCTTC-AGCTTGTGGGAGAACCT 2144
|| |||||||| |||||||| | ||| |||||||||| ||| |||| || || |||||
Sbjct 2088 TCGAGCAGAGAGGACAATGAGGA-GAAGCGACTGTGAG-TTCCAGCTAGTTGGCGAACCG 2145
Query 2145 ACAGGAGAGTTCTACGAAGTGGTGATGATATTTGGCATAATTGACATTCTTCAGGATTAT 2204
|||||||||| ||| || || || ||||| ||||| || || ||||||||||| || |||
Sbjct 2146 ACAGGAGAGTACTATGAGGTTGTCATGATCTTTGGAATCATAGACATTCTTCAAGACTAT 2205
Query 2205 GATATCAGCAAGAAGCTTGAACACGCTTACAAGAGCATACAGTATGATCCTTCCTCTATA 2264
|||||||||||||| || |||||||||||||||||||| ||||| |||||| | || ||
Sbjct 2206 GATATCAGCAAGAAACTAGAACACGCTTACAAGAGCATCCAGTACGATCCTACTTCAATC 2265
Query 2265 TCTGCGGTTGATCCGAGACAATACTCGAGGCGTTTCCGTGACTTT-ATCTTCAAGGTCTT 2323
|| || || |||||||| | |||||||| ||||||||||| ||| ||||||||||||||
Sbjct 2266 TCAGCCGTCGATCCGAGGCTGTACTCGAGACGTTTCCGTGA-TTTCATCTTCAAGGTCTT 2324
Query 2324 CACAGATGACAATTGA 2339
||| || || ||||||
Sbjct 2325 CACTGAGGATAATTGA 2340
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117117871485
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5