BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934948 Length=863 Score E Sequences producing significant alignments: (Bits) Value AT2G41260.2 | Symbols: M17, ATM17 | glycine-rich protein / late... 1110 0.0 AT2G41280.1 | Symbols: M10, ATM10 | late embryogenesis abundant... 233 2e-60 > AT2G41260.2 | Symbols: M17, ATM17 | glycine-rich protein / late embryogenesis abundant protein (M17) | chr2:17206510-17207698 FORWARD LENGTH=1080 Length=1080 Score = 1110 bits (601), Expect = 0.0 Identities = 803/894 (90%), Gaps = 39/894 (4%) Strand=Plus/Plus Query 1 TGTTTTGTGTAACGAAAACAAAATATGAGAAACCTCAAGTCCCTCGTTCTCTTGGCTTTG 60 ||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 8 TGTTTTGTGTAACTAAAACAAAATATGGGAAACCTCAAGTCTCTCGTTCTCTTGGCTTTG 67 Query 61 CTCTTTTCTTTCTCCCTCGCTGTTTTTGCGAACACATCCAACGATGCCACACATGTTAAA 120 ||||||||||||||| |||||||||| ||||||||||||||||||||||||| | Sbjct 68 CTCTTTTCTTTCTCCGTCGCTGTTTTCGCGAACACATCCAACGATGCCACAC------AC 121 Query 121 GATGAAGTGAAGCCAAGTACTGAAGCAACCGATGCTATAGAGCCGCAAAAACGTGAAGGT 180 |||||||||||||||||||||||||||||| |||| |||||| ||||||||| ||| ||| Sbjct 122 GATGAAGTGAAGCCAAGTACTGAAGCAACCCATGCCATAGAGGCGCAAAAACATGACGGT 181 Query 181 AAACCCCAGATCGAGGGAGCCGAAGTCGAGGCCAATGACGCTGTTGTAGAGCCCCAGCAA 240 ||||||||||||| || |||| |||| |||||||||||| |||||||||||||||||||| Sbjct 182 AAACCCCAGATCGCGGAAGCCCAAGTTGAGGCCAATGACCCTGTTGTAGAGCCCCAGCAA 241 Query 241 GGCTGGGGT-G--GTGGTGGTTGTAGTTACGGATGTTGCGGTGGGTGGTGGTATGGACGG 297 | ||||||| | ||||||||||||| | ||||||||||||||||||||| ||||||| Sbjct 242 GACTGGGGTGGCCGTGGTGGTTGTAGGTGGGGATGTTGCGGTGGGTGGTGGCGTGGACGG 301 Query 298 TGCAGATACTGTTGCAGGAGTCCAGCCGAGGCCAACGAAGTTGTGAAAACTGTTGAGCCC 357 |||||||||||||||||||||| ||||||||||| ||| |||||| |||||||||||||| Sbjct 302 TGCAGATACTGTTGCAGGAGTCAAGCCGAGGCCAGCGAGGTTGTGGAAACTGTTGAGCCC 361 Query 358 AACGATGTTGAGCCTCAGCAGGGTGGCC------GTGGCGGTGATGGCGGCGGTGGCCGT 411 |||||||||||||||||||||||||||| ||||||||| ||| ||||| |||||| Sbjct 362 AACGATGTTGAGCCTCAGCAGGGTGGCCGTGGTGGTGGCGGTGGTGGTGGCGGAGGCCGT 421 Query 412 GGTGGTTGTAGGTACGGATGTTGCGGTGGCTGGTGGCGTGGGCGGTGCAGATACTGTTGC 471 ||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 422 GGTGGTTGTAGGTGGGGATGTTGCGGTGGGTGGTGGCGTGGACGGTGCAGATACTGTTGC 481 Query 472 AGGACTCAAGCCGAGGCCAGCGAAGTTGTTGAAACTGTTGAGCCCAACGATGTAGAGCCT 531 |||| |||||||||||||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct 482 AGGAGTCAAGCCGAGGCCAGCGAGGTTGTGGAAACTGTTGAGCCCAACGATGTTGAGCCT 541 Query 532 CAGCAGGGTGGCC---gtggtggc---ggtggcggc-gatggccgtggtggttgtaggta 584 ||||||||||||| |||||||| ||||| ||| || ||||||||||||||||||| Sbjct 542 CAGCAGGGTGGCCGTGGTGGTGGCGGTGGTGGTGGCGGA-GGCCGTGGTGGTTGTAGGTG 600 Query 585 cggatgttgcggtgggtggtggcgTGGGCGGTGCAGATACTGTTGCAGGACTCAAGCCGA 644 |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 601 GGGATGTTGCGGTGGGTGGTGGCGTGGACGGTGCAGATACTGTTGCAGGAGTCAAGCCGA 660 Query 645 GGCCAGCGAAGTTGTTGAAACTGTTGAGCCCAACGATGTTGAGCCTCAGCAGggtggtcg 704 ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 661 GGCCAGCGAGGTTGTGGAAACTGTTGAGCCCAACGATGTTGAGCCTCAGCAGGGTGGCCG 720 Query 705 tgg------cgg---------cggtggccgtggtggttgtaggtacggatgttgtggtgg 749 ||| ||| ||||||||||||||||||||||| |||||||| ||||| Sbjct 721 TGGTGGTGGCGGTGGTGGTGGCGGTGGCCGTGGTGGTTGTAGGTGGGGATGTTGCGGTGG 780 Query 750 gtggtggcgtggacggtgCAGATATTGTTGCAGGACTCAAGCCGAGGCAAACGAGGTTGT 809 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 781 GTGGTGGCGTGGACGGTGCAGATACTGTTGCAGGAGTCAAGCCGAGGCAAACGAGGTTGT 840 Query 810 GGAAACTGTTGAGGCCCAACAAGCTAAGCCATAAATTGGCGTGTAACACAAACT 863 |||||||||||||||||||||||||||||||| ||||| ||||||| ||||||| Sbjct 841 GGAAACTGTTGAGGCCCAACAAGCTAAGCCATGAATTG-CGTGTAATACAAACT 893 Score = 564 bits (305), Expect = 5e-160 Identities = 398/441 (90%), Gaps = 13/441 (3%) Strand=Plus/Plus Query 251 GTGGTGGTTGTAGTTACGGATGTTGCGGTGGGTGGTGGTATGGACGGTGCAGATACTGTT 310 ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| Sbjct 420 GTGGTGGTTGTAGGTGGGGATGTTGCGGTGGGTGGTGGCGTGGACGGTGCAGATACTGTT 479 Query 311 GCAGGAGTCCAGCCGAGGCCAACGAAGTTGTGAAAACTGTTGAGCCCAACGATGTTGAGC 370 ||||||||| ||||||||||| ||| |||||| ||||||||||||||||||||||||||| Sbjct 480 GCAGGAGTCAAGCCGAGGCCAGCGAGGTTGTGGAAACTGTTGAGCCCAACGATGTTGAGC 539 Query 371 CTCAGCAGGGTGGCCGTGG------CGGTGATGGCGGCGGTGGCCGTGGTGGTTGTAGGT 424 ||||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||| Sbjct 540 CTCAGCAGGGTGGCCGTGGTGGTGGCGGTGGTGGTGGCGGAGGCCGTGGTGGTTGTAGGT 599 Query 425 ACGGATGTTGCGGTGGCTGGTGGCGTGGGCGGTGCAGATACTGTTGCAGGACTCAAGCCG 484 |||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| Sbjct 600 GGGGATGTTGCGGTGGGTGGTGGCGTGGACGGTGCAGATACTGTTGCAGGAGTCAAGCCG 659 Query 485 AGGCCAGCGAAGTTGTTGAAACTGTTGAGCCCAACGATGTAGAGCCTCAGCAGGGTGGCC 544 |||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 660 AGGCCAGCGAGGTTGTGGAAACTGTTGAGCCCAACGATGTTGAGCCTCAGCAGGGTGGCC 719 Query 545 gtggtgg---cggtggcgg---cgatggccgtggtggttgtaggtacggatgttgcggtg 598 ||||||| |||||| || || |||||||||||||||||||| ||||||||||||| Sbjct 720 GTGGTGGTGGCGGTGGTGGTGGCGGTGGCCGTGGTGGTTGTAGGTGGGGATGTTGCGGTG 779 Query 599 ggtggtggcgTGGGCGGTGCAGATACTGTTGCAGGACTCAAGCCGAGGCCAGCGAAGTTG 658 ||||||||||||| |||||||||||||||||||||| |||||||||||| | ||| |||| Sbjct 780 GGTGGTGGCGTGGACGGTGCAGATACTGTTGCAGGAGTCAAGCCGAGGCAAACGAGGTTG 839 Query 659 TTGAAACTGTTGAG-CCCAAC 678 | |||||||||||| |||||| Sbjct 840 TGGAAACTGTTGAGGCCCAAC 860 Score = 542 bits (293), Expect = 3e-153 Identities = 401/449 (89%), Gaps = 24/449 (5%) Strand=Plus/Plus Query 403 GGTGGCCGTGGTGGTTGTAGGTACGGATGTTGCGGTGGCTGGTGGCGTGGGCGGTGCAGA 462 |||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||| Sbjct 248 GGTGGCCGTGGTGGTTGTAGGTGGGGATGTTGCGGTGGGTGGTGGCGTGGACGGTGCAGA 307 Query 463 TACTGTTGCAGGACTCAAGCCGAGGCCAGCGAAGTTGTTGAAACTGTTGAGCCCAACGAT 522 ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 308 TACTGTTGCAGGAGTCAAGCCGAGGCCAGCGAGGTTGTGGAAACTGTTGAGCCCAACGAT 367 Query 523 GTAGAGCCTCAGCAGGGTGGCC---gtggtggc---ggtggcggc-gatggccgtggtgg 575 || ||||||||||||||||||| |||||||| ||||| ||| || ||||||||||| Sbjct 368 GTTGAGCCTCAGCAGGGTGGCCGTGGTGGTGGCGGTGGTGGTGGCGGA-GGCCGTGGTGG 426 Query 576 ttgtaggtacggatgttgcggtgggtggtggcgTGGGCGGTGCAGATACTGTTGCAGGAC 635 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 427 TTGTAGGTGGGGATGTTGCGGTGGGTGGTGGCGTGGACGGTGCAGATACTGTTGCAGGAG 486 Query 636 TCAAGCCGAGGCCAGCGAAGTTGTTGAAACTGTTGAGCCCAACGATGTTGAGCCTCAGCA 695 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 487 TCAAGCCGAGGCCAGCGAGGTTGTGGAAACTGTTGAGCCCAACGATGTTGAGCCTCAGCA 546 Query 696 Gggtggtcgtggcgg---cggtgg------c-----c-gtggtggttgtaggtacggatg 740 |||||| ||||| || |||||| | | ||||||||||||||| ||||| Sbjct 547 GGGTGGCCGTGGTGGTGGCGGTGGTGGTGGCGGAGGCCGTGGTGGTTGTAGGTGGGGATG 606 Query 741 ttgtggtgggtggtggcgtggacggtgCAGATATTGTTGCAGGACTCAAGCCGAGGCAAA 800 ||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||| | Sbjct 607 TTGCGGTGGGTGGTGGCGTGGACGGTGCAGATACTGTTGCAGGAGTCAAGCCGAGGCCAG 666 Query 801 CGAGGTTGTGGAAACTGTTGAGGCCCAAC 829 |||||||||||||||||||||| |||||| Sbjct 667 CGAGGTTGTGGAAACTGTTGAG-CCCAAC 694 Score = 353 bits (191), Expect = 1e-96 Identities = 249/276 (90%), Gaps = 7/276 (3%) Strand=Plus/Plus Query 251 GTGGTGGTTGTAGTTACGGATGTTGCGGTGGGTGGTGGTATGGACGGTGCAGATACTGTT 310 ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| Sbjct 585 GTGGTGGTTGTAGGTGGGGATGTTGCGGTGGGTGGTGGCGTGGACGGTGCAGATACTGTT 644 Query 311 GCAGGAGTCCAGCCGAGGCCAACGAAGTTGTGAAAACTGTTGAGCCCAACGATGTTGAGC 370 ||||||||| ||||||||||| ||| |||||| ||||||||||||||||||||||||||| Sbjct 645 GCAGGAGTCAAGCCGAGGCCAGCGAGGTTGTGGAAACTGTTGAGCCCAACGATGTTGAGC 704 Query 371 CTCAGCAGGGTGGCCGTGG------CGGTGATGGCGGCGGTGGCCGTGGTGGTTGTAGGT 424 ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||| Sbjct 705 CTCAGCAGGGTGGCCGTGGTGGTGGCGGTGGTGGTGGCGGTGGCCGTGGTGGTTGTAGGT 764 Query 425 ACGGATGTTGCGGTGGCTGGTGGCGTGGGCGGTGCAGATACTGTTGCAGGACTCAAGCCG 484 |||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| Sbjct 765 GGGGATGTTGCGGTGGGTGGTGGCGTGGACGGTGCAGATACTGTTGCAGGAGTCAAGCCG 824 Query 485 AGGCCAGCGAAGTTGTTGAAACTGTTGAG-CCCAAC 519 |||| | ||| ||||| |||||||||||| |||||| Sbjct 825 AGGCAAACGAGGTTGTGGAAACTGTTGAGGCCCAAC 860 Score = 333 bits (180), Expect = 2e-90 Identities = 250/281 (89%), Gaps = 16/281 (6%) Strand=Plus/Plus Query 564 tggccgtggtggttgtaggtacggatgttgcggtgggtggtggcgTGGGCGGTGCAGATA 623 |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 250 TGGCCGTGGTGGTTGTAGGTGGGGATGTTGCGGTGGGTGGTGGCGTGGACGGTGCAGATA 309 Query 624 CTGTTGCAGGACTCAAGCCGAGGCCAGCGAAGTTGTTGAAACTGTTGAGCCCAACGATGT 683 ||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 310 CTGTTGCAGGAGTCAAGCCGAGGCCAGCGAGGTTGTGGAAACTGTTGAGCCCAACGATGT 369 Query 684 TGAGCCTCAGCAGggtggtcgtggcgg---cggtgg------c-----c-gtggtggttg 728 |||||||||||||||||| ||||| || |||||| | | |||||||||| Sbjct 370 TGAGCCTCAGCAGGGTGGCCGTGGTGGTGGCGGTGGTGGTGGCGGAGGCCGTGGTGGTTG 429 Query 729 taggtacggatgttgtggtgggtggtggcgtggacggtgCAGATATTGTTGCAGGACTCA 788 ||||| |||||||| ||||||||||||||||||||||||||||| |||||||||| ||| Sbjct 430 TAGGTGGGGATGTTGCGGTGGGTGGTGGCGTGGACGGTGCAGATACTGTTGCAGGAGTCA 489 Query 789 AGCCGAGGCAAACGAGGTTGTGGAAACTGTTGAGGCCCAAC 829 ||||||||| | |||||||||||||||||||||| |||||| Sbjct 490 AGCCGAGGCCAGCGAGGTTGTGGAAACTGTTGAG-CCCAAC 529 Score = 148 bits (80), Expect = 7e-35 Identities = 101/111 (91%), Gaps = 1/111 (1%) Strand=Plus/Plus Query 251 GTGGTGGTTGTAGTTACGGATGTTGCGGTGGGTGGTGGTATGGACGGTGCAGATACTGTT 310 ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||| Sbjct 750 GTGGTGGTTGTAGGTGGGGATGTTGCGGTGGGTGGTGGCGTGGACGGTGCAGATACTGTT 809 Query 311 GCAGGAGTCCAGCCGAGGCCAACGAAGTTGTGAAAACTGTTGAG-CCCAAC 360 ||||||||| ||||||||| ||||| |||||| ||||||||||| |||||| Sbjct 810 GCAGGAGTCAAGCCGAGGCAAACGAGGTTGTGGAAACTGTTGAGGCCCAAC 860 > AT2G41280.1 | Symbols: M10, ATM10 | late embryogenesis abundant protein (M10) / LEA protein M10 | chr2:17209697-17210423 FORWARD LENGTH=602 Length=602 Score = 233 bits (126), Expect = 2e-60 Identities = 153/166 (92%), Gaps = 1/166 (1%) Strand=Plus/Plus Query 1 TGTTTTGTGTAACGAAAACAAAATATGAGAAACCTCAAGTCCCTCGTTCTCTTGGCTTTG 60 ||||||||||||||||||||||| ||| ||||||||| ||| ||||||||| |||||||| Sbjct 43 TGTTTTGTGTAACGAAAACAAAAAATGGGAAACCTCATGTCTCTCGTTCTCGTGGCTTTG 102 Query 61 CTCTTTTCTTTCTCCCTCGCTGTTTTTGCGAACACATCCAACGATGCCACACATGTTAAA 120 ||||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||||| Sbjct 103 CTCTTTTCTCTCTCCCTTGCTGTTATTGCGGACACATCCAACGATGCCACACATGTTAAA 162 Query 121 GATGAAGTGAAGCCAAGTACTGAAGCAACCGATGCTATAGA-GCCG 165 || ||||||||||| |||||||||||||| ||||||||||| |||| Sbjct 163 GAAGAAGTGAAGCCGAGTACTGAAGCAACTGATGCTATAGAAGCCG 208 Score = 207 bits (112), Expect = 1e-52 Identities = 147/163 (90%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 198 AGCCGAAGTCGAGGCCAATGACGCTGTTGTAGAGCCCCAGCAAGGCTGGGGTGGTGGTGG 257 |||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| Sbjct 204 AGCCGAAGTCGAGGTCAATGACGCTGTTGTAGAGCCCCAGCAAGGCTTGCCTGGTGGTGG 263 Query 258 TTGTAG-TTACGGATGTTGCGGTGGGT---GGTGGTATGGACGGTGCAGATACTGTTGCA 313 |||||| || ||||||||||||||||| ||||| |||||| ||||| |||||||||| Sbjct 264 TTGTAGGTT-CGGATGTTGCGGTGGGTACTGGTGGAATGGACTGTGCATATACTGTTGCC 322 Query 314 GGAGTCCAGCCGAGGCCAACGAAGTTGTGAAAACTGTTGAGCC 356 | |||| ||||||||||||||||||||| |||||||||||||| Sbjct 323 GCAGTCAAGCCGAGGCCAACGAAGTTGTAAAAACTGTTGAGCC 365 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42096215186 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5