BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg934956 Length=1267 Score E Sequences producing significant alignments: (Bits) Value AT2G41330.1 | Symbols: | Glutaredoxin family protein | chr2:17... 1504 0.0 AT3G57070.1 | Symbols: | Glutaredoxin family protein | chr3:21... 357 1e-97 > AT2G41330.1 | Symbols: | Glutaredoxin family protein | chr2:17226948-17228378 FORWARD LENGTH=1431 Length=1431 Score = 1504 bits (814), Expect = 0.0 Identities = 1133/1276 (89%), Gaps = 66/1276 (5%) Strand=Plus/Plus Query 1 TCTGTTCTGCTTCGAAAATTATGGGTTCCTCTGTTTCTAAAACCG----CT-T-C-T-T- 51 |||||||||||||| |||||||||||||||||||||||||||||| || | | | | Sbjct 101 TCTGTTCTGCTTCG-AAATTATGGGTTCCTCTGTTTCTAAAACCGCTTCCTCTGCTTCTG 159 Query 52 CATCTTC--T----TCG---TTGAATTTACCTCCGGAGACGGAATTCAACATCCCGTCTT 102 | ||||| | ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct 160 CTTCTTCTATAACATCGATTTTGAATTCACCTCCGGAGACGGAATTCAACATCCCTTCTT 219 Query 103 CGTCTGTCCCTAAGGCTTTCACATTTCCGATGCCGTCGATTCATCATCCACCGGTTAAAA 162 | || || ||||| |||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 220 CATCGGTACCTAAAGCTTTCACATTTCCGATGCCGTCGATTCATCATCCACCTGCTAAAA 279 Query 163 AAGGCGACACGCACCACTTCGTCTCTCTTACATCGACCACTTACGGCTCTCTTCTCCTCG 222 |||||||||| |||||||| |||||||||||||||||||||||||| |||||| | || Sbjct 280 AAGGCGACACACACCACTTTGTCTCTCTTACATCGACCACTTACGGTTCTCTTGT--TC- 336 Query 223 ATGGAGCTTCCGACAGACAAACATTGCCTCATATCTCCGTTACCGGGAAGAATAACAAGA 282 | || ||||||||||||||||||||| ||||||||| ||||||||| |||||||| Sbjct 337 -TCGA-----CGACAGACAAACATTGCCTCACATCTCCGTTTCCGGGAAGAGTAACAAGA 390 Query 283 AGATGCCTGAAACAGAGGAGGCACGCGAGTCGTTGTCTCCTGACTCAGTGATCAACACAT 342 |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||| Sbjct 391 AGATGCCTGAAACAGAGGAGGCTCGCGACTCGTTCTCTCCTGACTCAGTGATCAACACAT 450 Query 343 GGGAGCTCATGAACGGCCTCGACGACGATTTCGACTCTGAGAATTCCGATACAAGTAAGC 402 ||||||||||||||| |||||||||||| ||||| || | ||||||||||||||||||| Sbjct 451 GGGAGCTCATGAACGACCTCGACGACGAATTCGATTCCGCGAATTCCGATACAAGTAAGA 510 Query 403 GTAATTCCGTCGTAAATTTGGATTGTTTTTCTAAACCCATCAAGAATCGAGACGTGGTTA 462 |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 511 GTAATTCCGTCGTAAATTTGGATTCCTTTTCTAAACCCATCACGAATCGAGACGTGGTTA 570 Query 463 TTAATGGGTCTTCGTTGAAATTGGACGAATCTTACGAAGCTGAGGAAGATTGGAGATTAC 522 ||||||||||| || | | | | | ||||||||||| ||||||||||||||||||| Sbjct 571 TTAATGGGTCTGCG-T---A-T-G--G-ATCTTACGAAGATGAGGAAGATTGGAGATTAT 621 Query 523 TGCCTTTTAAACCTAAGCAACCTCTGTGGAAACATATGTCTGAAGAATCATTTCTCTCTG 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 622 TGCCTTTTAAACCTAAGCAACCTCTGTGGAAACATATGTCTGAAGAATCATTTCTCTCTG 681 Query 583 ATTTAGATCCTAACATTATCTCATCTTACAAGAA-AGCATTGTCTTCTAAGCAACTAAGC 641 ||||||||||||||||||||||||||||||| || |||| |||| || || || ||| || Sbjct 682 ATTTAGATCCTAACATTATCTCATCTTACAA-AAGAGCACTGTCCTCCAAACAGCTAGGC 740 Query 642 AAAAACACTAGTAATGGTCAC-AAAAGCGCGATAGCTCTCTCTTGCAACCACTCAAATCA 700 || |||| ||| ||||| ||| ||| | || || | || | | || Sbjct 741 AAGAACAGTAGCAATGGCCACTCAAA--TC-AT---TCGGT-TT--------T--AGTC- 782 Query 701 ATCGACTTTACCAGAATCTGTATCCTCGACTCCACTGACTTCTCAGACTTTGG---AAGA 757 | | ||||||||||| |||||| || | |||| ||| ||||||||||| || |||| Sbjct 783 A--G--TTTACCAGAATATGTATCTTCTAGTCCATTGAGTTCTCAGACTTCGGAAAAAGA 838 Query 758 CCAAGAGAAACCAAGATTGCTTGAAAAAGAAGATAACAAGAACAAGATAGTATTGTACTT 817 ||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||| Sbjct 839 CCAAGAGAAACCAAGATTGCTTGAAAAAGAAGATAACGAGAACAAGATAGTAGTATACTT 898 Query 818 CACTAGCCTCAGAGGAATTCGAAAGACGTATGAAGATTGTTGTTGCGTTAGAACGATATT 877 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 899 CACTAGCCTCAGAGGAATTCGAAAGACGTATGAAGATTGTTGTTGCGTTAGAGCGATATT 958 Query 878 GAGAGGGTTTCAGGTTGCGGTAGAGGAACGCGACATCTCAATGGATTCCAAATATAGAAA 937 ||||||||||||||||||||||||||| || |||||||||||||| |||||||| || || Sbjct 959 GAGAGGGTTTCAGGTTGCGGTAGAGGAGCGTGACATCTCAATGGACTCCAAATACAGGAA 1018 Query 938 AGAGCTTCAGAATGCACTCGGTGAAGAGAAACCGGTTTGTTTGCCTCAGGTGTTTATAAG 997 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1019 AGAGCTTCAGAATGCACTCGGCGAAGAGAAACCGGTTTGTTTGCCTCAGGTGTTTATAAG 1078 Query 998 AGGTGTCCGCATTGGTGGAATTGAGGAGATCAAGATACTCAACGATGGAGGCGAACTGGC 1057 ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1079 AGGCGTCCGCATTGGTGGAATTGAGGAGATCAAGATACTCAACGATGGAGGTGAACTGGC 1138 Query 1058 AGAGATGTTAAAAGATTTCCCTGCTTGTGAATCCGTGGGAGCCTGCGAAAGCTGCGGGGA 1117 |||||||||||||||||| |||||||| |||||| | ||||||||||| |||||||| || Sbjct 1139 AGAGATGTTAAAAGATTTTCCTGCTTGCGAATCCATTGGAGCCTGCGATAGCTGCGGAGA 1198 Query 1118 TGCAAGGTTTGTGCCGTGTACTAATTGTGGTGGTAGTACTAAAGTGTTTGAGGAAAAAGA 1177 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 1199 TGCAAGGTTTGTGCCGTGTACTAATTGTGGCGGTAGTACTAAAGTGTTTGAGGAACAAGA 1258 Query 1178 AGATGGGTTTAAGAGATGCAATGAATGCAATGAGAATGGATTGGTACGTTGTAACAGGTG 1237 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 1259 AGATGGGTTTAAGAGATGCAATGGATGCAATGAGAATGGATTGGTACGTTGTAACAAGTG 1318 Query 1238 TTGTCATTAGCTAATT 1253 ||||| |||| ||||| Sbjct 1319 TTGTCTTTAG-TAATT 1333 > AT3G57070.1 | Symbols: | Glutaredoxin family protein | chr3:21123924-21125647 FORWARD LENGTH=1724 Length=1724 Score = 357 bits (193), Expect = 1e-97 Identities = 366/447 (82%), Gaps = 22/447 (5%) Strand=Plus/Plus Query 795 AAGAACAAGATAGTATTGTACTTCACTAGCCTCAGAGGAATTCGAAAGACGTATGAAGAT 854 ||| ||||||| ||| | |||||||| | ||||||||||||||||||||| || || ||| Sbjct 1050 AAG-ACAAGATTGTACTCTACTTCACAACCCTCAGAGGAATTCGAAAGACATACGAGGAT 1108 Query 855 TGTTGTTGCGTTAGAACGATATTGAGAGG-GTTTCAGGTTG-CGGTAGAGGAACGCGACA 912 ||||||||||||||| ||||||||||||| | |||| | || | ||||| ||||| |||| Sbjct 1109 TGTTGTTGCGTTAGAGCGATATTGAGAGGAG-TTCAAG-TGTCCGTAGACGAACGTGACA 1166 Query 913 TCTCAATGGATTCCAAATATAGAAAAGAGCTTC--AGAATGCACT--CGGTGAAGAGAAA 968 |||| |||||||||||||| || |||||||||| || ||| | || | ||||||| Sbjct 1167 TCTCTATGGATTCCAAATACAGGAAAGAGCTTCAAAGCGTGC-TTGGCGCCGCAGAGAAA 1225 Query 969 CCGGTTTGTTTGCCTCAGGTGTTTATAAGAGGTG-TCCGCATTGGTGGAATTGAGGAGAT 1027 |||||||||||||||||||||||||| ||||| || ||||||||| | |||||||| Sbjct 1226 CCGGTTTGTTTGCCTCAGGTGTTTATCAGAGGAACTCA-CATTGGTGGCGTGGAGGAGAT 1284 Query 1028 CAAG-ATACTCAACGATGGAGGCGAACTGGCAGAGATGTTAAAAGATTTCCCTGCTTGTG 1086 | | | || || ||||| || ||| | ||||||||||| ||||||||||||||||||| Sbjct 1285 TATGCAG-CTAAATGATGGTGGTGAATTAGCAGAGATGTTGAAAGATTTCCCTGCTTGTG 1343 Query 1087 AATC-CGTGGGAGCC-TGC-GAAAGCTGCGGGGATGCAAGGTTTGTGCCGTGTACTAATT 1143 || | | |||| | | ||| | | |||| || ||||||||||||||||| |||||||| | Sbjct 1344 AA-CGCTTGGG-GACATGCCGGA-GCTGTGGTGATGCAAGGTTTGTGCCTTGTACTAACT 1400 Query 1144 GTGGTGGTAGTACTAAAGTGTTTGAGGAAAAAGAAGATGGGTTTAAGAGATG-CAATGAA 1202 ||| |||||| || ||||||||||| ||| |||| || |||||||| | || | | || Sbjct 1401 GTGATGGTAGCACCAAAGTGTTTGAAGAACAAGATGAACGGTTTAAGCGGTGTCC-TAAA 1459 Query 1203 TGCAATGAGAATGGATTGGTACGTTGT 1229 |||||||||||||||||||| |||||| Sbjct 1460 TGCAATGAGAATGGATTGGTGCGTTGT 1486 Score = 189 bits (102), Expect = 6e-47 Identities = 273/349 (78%), Gaps = 37/349 (11%) Strand=Plus/Plus Query 318 TCTCCTGACTCAGTGATCAACACATGGGAGCTCATGAACGGCCTCGACGACGATTTCG-A 376 |||||||| ||||| || ||||| |||||||| ||| | ||| | ||||| || |||| | Sbjct 563 TCTCCTGATTCAGTCATAAACACTTGGGAGCTTATGGATGGCTTGGACGATGAATTCGAA 622 Query 377 CTCTGAGAATTCCGATACAAGTAAGCGTAATTCCGTCGTAAATTTGGATTGTTT-TTCTA 435 || || |||||| | || | | |||| |||| |||||| ||||| ||| |||| Sbjct 623 TTC-GA-AATTCCCAAAC-CG---G-GTAA--GCGTC-TAAATTCGGATT-TTTGCTCTA 671 Query 436 AACCC-ATCAAGAATC-GAGACGTG-GTTATTAATGGGTCTTCGTTGAAATTGGACGAAT 492 ||||| | | ||||| || | ||| ||| | ||||||||||||||||||||||| |||| Sbjct 672 AACCCGA-CCCGAATCGGA-ATGTGAGTT-TAAATGGGTCTTCGTTGAAATTGGATGAAT 728 Query 493 CTTAC--GA-----AG-CT-GAGGAAGA--TTGGAGA-----TTAC--TGCCTTTTAAAC 534 ||||| || || | || ||||| |||||| || | || ||| ||||| Sbjct 729 CTTACGAGATTGTGAGAATCGAAGAAGACGATGGAGATTGGGTTCCTTTGACTTATAAAC 788 Query 535 CTAAGCAACCTCTGTGGAAACATATGTCTGAAGAATCATTTCTCTCTGATTTAGATCCTA 594 ||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| | Sbjct 789 CTAAGCAACCTTTGTGGAAGCATTTGTCTGAAGAATCATTTCTCTCTGATTTAGATCCCA 848 Query 595 ACATTATCTCATCTTACAAGAAAGCATTGTCTTCTAAGCAACTAAGCAA 643 |||| ||||||| ||||||||||| ||||||||||||| | ||||||| Sbjct 849 GCATTGTCTCATCCTACAAGAAAGCTTTGTCTTCTAAGCTATTAAGCAA 897 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 62298876345 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5