BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg934956

Length=1267
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G41330.1 | Symbols:  | Glutaredoxin family protein | chr2:17...  1504    0.0  
  AT3G57070.1 | Symbols:  | Glutaredoxin family protein | chr3:21...   357    1e-97


> AT2G41330.1 | Symbols:  | Glutaredoxin family protein | chr2:17226948-17228378 
FORWARD LENGTH=1431
Length=1431

 Score = 1504 bits (814),  Expect = 0.0
 Identities = 1133/1276 (89%), Gaps = 66/1276 (5%)
 Strand=Plus/Plus

Query  1     TCTGTTCTGCTTCGAAAATTATGGGTTCCTCTGTTTCTAAAACCG----CT-T-C-T-T-  51
             |||||||||||||| ||||||||||||||||||||||||||||||    || | | | | 
Sbjct  101   TCTGTTCTGCTTCG-AAATTATGGGTTCCTCTGTTTCTAAAACCGCTTCCTCTGCTTCTG  159

Query  52    CATCTTC--T----TCG---TTGAATTTACCTCCGGAGACGGAATTCAACATCCCGTCTT  102
             | |||||  |    |||   ||||||| ||||||||||||||||||||||||||| ||||
Sbjct  160   CTTCTTCTATAACATCGATTTTGAATTCACCTCCGGAGACGGAATTCAACATCCCTTCTT  219

Query  103   CGTCTGTCCCTAAGGCTTTCACATTTCCGATGCCGTCGATTCATCATCCACCGGTTAAAA  162
             | || || ||||| |||||||||||||||||||||||||||||||||||||| | |||||
Sbjct  220   CATCGGTACCTAAAGCTTTCACATTTCCGATGCCGTCGATTCATCATCCACCTGCTAAAA  279

Query  163   AAGGCGACACGCACCACTTCGTCTCTCTTACATCGACCACTTACGGCTCTCTTCTCCTCG  222
             |||||||||| |||||||| |||||||||||||||||||||||||| |||||| |  || 
Sbjct  280   AAGGCGACACACACCACTTTGTCTCTCTTACATCGACCACTTACGGTTCTCTTGT--TC-  336

Query  223   ATGGAGCTTCCGACAGACAAACATTGCCTCATATCTCCGTTACCGGGAAGAATAACAAGA  282
              | ||     ||||||||||||||||||||| ||||||||| ||||||||| ||||||||
Sbjct  337   -TCGA-----CGACAGACAAACATTGCCTCACATCTCCGTTTCCGGGAAGAGTAACAAGA  390

Query  283   AGATGCCTGAAACAGAGGAGGCACGCGAGTCGTTGTCTCCTGACTCAGTGATCAACACAT  342
             |||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||
Sbjct  391   AGATGCCTGAAACAGAGGAGGCTCGCGACTCGTTCTCTCCTGACTCAGTGATCAACACAT  450

Query  343   GGGAGCTCATGAACGGCCTCGACGACGATTTCGACTCTGAGAATTCCGATACAAGTAAGC  402
             ||||||||||||||| |||||||||||| ||||| || | ||||||||||||||||||| 
Sbjct  451   GGGAGCTCATGAACGACCTCGACGACGAATTCGATTCCGCGAATTCCGATACAAGTAAGA  510

Query  403   GTAATTCCGTCGTAAATTTGGATTGTTTTTCTAAACCCATCAAGAATCGAGACGTGGTTA  462
             ||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||
Sbjct  511   GTAATTCCGTCGTAAATTTGGATTCCTTTTCTAAACCCATCACGAATCGAGACGTGGTTA  570

Query  463   TTAATGGGTCTTCGTTGAAATTGGACGAATCTTACGAAGCTGAGGAAGATTGGAGATTAC  522
             ||||||||||| || |   | | |  | ||||||||||| ||||||||||||||||||| 
Sbjct  571   TTAATGGGTCTGCG-T---A-T-G--G-ATCTTACGAAGATGAGGAAGATTGGAGATTAT  621

Query  523   TGCCTTTTAAACCTAAGCAACCTCTGTGGAAACATATGTCTGAAGAATCATTTCTCTCTG  582
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  622   TGCCTTTTAAACCTAAGCAACCTCTGTGGAAACATATGTCTGAAGAATCATTTCTCTCTG  681

Query  583   ATTTAGATCCTAACATTATCTCATCTTACAAGAA-AGCATTGTCTTCTAAGCAACTAAGC  641
             ||||||||||||||||||||||||||||||| || |||| |||| || || || ||| ||
Sbjct  682   ATTTAGATCCTAACATTATCTCATCTTACAA-AAGAGCACTGTCCTCCAAACAGCTAGGC  740

Query  642   AAAAACACTAGTAATGGTCAC-AAAAGCGCGATAGCTCTCTCTTGCAACCACTCAAATCA  700
             || |||| ||| ||||| |||  |||   | ||   ||  | ||        |  | || 
Sbjct  741   AAGAACAGTAGCAATGGCCACTCAAA--TC-AT---TCGGT-TT--------T--AGTC-  782

Query  701   ATCGACTTTACCAGAATCTGTATCCTCGACTCCACTGACTTCTCAGACTTTGG---AAGA  757
             |  |  ||||||||||| |||||| || | |||| ||| ||||||||||| ||   ||||
Sbjct  783   A--G--TTTACCAGAATATGTATCTTCTAGTCCATTGAGTTCTCAGACTTCGGAAAAAGA  838

Query  758   CCAAGAGAAACCAAGATTGCTTGAAAAAGAAGATAACAAGAACAAGATAGTATTGTACTT  817
             ||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||
Sbjct  839   CCAAGAGAAACCAAGATTGCTTGAAAAAGAAGATAACGAGAACAAGATAGTAGTATACTT  898

Query  818   CACTAGCCTCAGAGGAATTCGAAAGACGTATGAAGATTGTTGTTGCGTTAGAACGATATT  877
             |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct  899   CACTAGCCTCAGAGGAATTCGAAAGACGTATGAAGATTGTTGTTGCGTTAGAGCGATATT  958

Query  878   GAGAGGGTTTCAGGTTGCGGTAGAGGAACGCGACATCTCAATGGATTCCAAATATAGAAA  937
             ||||||||||||||||||||||||||| || |||||||||||||| |||||||| || ||
Sbjct  959   GAGAGGGTTTCAGGTTGCGGTAGAGGAGCGTGACATCTCAATGGACTCCAAATACAGGAA  1018

Query  938   AGAGCTTCAGAATGCACTCGGTGAAGAGAAACCGGTTTGTTTGCCTCAGGTGTTTATAAG  997
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct  1019  AGAGCTTCAGAATGCACTCGGCGAAGAGAAACCGGTTTGTTTGCCTCAGGTGTTTATAAG  1078

Query  998   AGGTGTCCGCATTGGTGGAATTGAGGAGATCAAGATACTCAACGATGGAGGCGAACTGGC  1057
             ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct  1079  AGGCGTCCGCATTGGTGGAATTGAGGAGATCAAGATACTCAACGATGGAGGTGAACTGGC  1138

Query  1058  AGAGATGTTAAAAGATTTCCCTGCTTGTGAATCCGTGGGAGCCTGCGAAAGCTGCGGGGA  1117
             |||||||||||||||||| |||||||| |||||| | ||||||||||| |||||||| ||
Sbjct  1139  AGAGATGTTAAAAGATTTTCCTGCTTGCGAATCCATTGGAGCCTGCGATAGCTGCGGAGA  1198

Query  1118  TGCAAGGTTTGTGCCGTGTACTAATTGTGGTGGTAGTACTAAAGTGTTTGAGGAAAAAGA  1177
             |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct  1199  TGCAAGGTTTGTGCCGTGTACTAATTGTGGCGGTAGTACTAAAGTGTTTGAGGAACAAGA  1258

Query  1178  AGATGGGTTTAAGAGATGCAATGAATGCAATGAGAATGGATTGGTACGTTGTAACAGGTG  1237
             ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct  1259  AGATGGGTTTAAGAGATGCAATGGATGCAATGAGAATGGATTGGTACGTTGTAACAAGTG  1318

Query  1238  TTGTCATTAGCTAATT  1253
             ||||| |||| |||||
Sbjct  1319  TTGTCTTTAG-TAATT  1333


> AT3G57070.1 | Symbols:  | Glutaredoxin family protein | chr3:21123924-21125647 
FORWARD LENGTH=1724
Length=1724

 Score =  357 bits (193),  Expect = 1e-97
 Identities = 366/447 (82%), Gaps = 22/447 (5%)
 Strand=Plus/Plus

Query  795   AAGAACAAGATAGTATTGTACTTCACTAGCCTCAGAGGAATTCGAAAGACGTATGAAGAT  854
             ||| ||||||| ||| | |||||||| | ||||||||||||||||||||| || || |||
Sbjct  1050  AAG-ACAAGATTGTACTCTACTTCACAACCCTCAGAGGAATTCGAAAGACATACGAGGAT  1108

Query  855   TGTTGTTGCGTTAGAACGATATTGAGAGG-GTTTCAGGTTG-CGGTAGAGGAACGCGACA  912
             ||||||||||||||| ||||||||||||| | |||| | || | ||||| ||||| ||||
Sbjct  1109  TGTTGTTGCGTTAGAGCGATATTGAGAGGAG-TTCAAG-TGTCCGTAGACGAACGTGACA  1166

Query  913   TCTCAATGGATTCCAAATATAGAAAAGAGCTTC--AGAATGCACT--CGGTGAAGAGAAA  968
             |||| |||||||||||||| || ||||||||||  ||  |||  |  ||  | |||||||
Sbjct  1167  TCTCTATGGATTCCAAATACAGGAAAGAGCTTCAAAGCGTGC-TTGGCGCCGCAGAGAAA  1225

Query  969   CCGGTTTGTTTGCCTCAGGTGTTTATAAGAGGTG-TCCGCATTGGTGGAATTGAGGAGAT  1027
             |||||||||||||||||||||||||| |||||   ||  |||||||||  | ||||||||
Sbjct  1226  CCGGTTTGTTTGCCTCAGGTGTTTATCAGAGGAACTCA-CATTGGTGGCGTGGAGGAGAT  1284

Query  1028  CAAG-ATACTCAACGATGGAGGCGAACTGGCAGAGATGTTAAAAGATTTCCCTGCTTGTG  1086
              | | |  || || ||||| || ||| | ||||||||||| |||||||||||||||||||
Sbjct  1285  TATGCAG-CTAAATGATGGTGGTGAATTAGCAGAGATGTTGAAAGATTTCCCTGCTTGTG  1343

Query  1087  AATC-CGTGGGAGCC-TGC-GAAAGCTGCGGGGATGCAAGGTTTGTGCCGTGTACTAATT  1143
             || | | |||| | | ||| | | |||| || ||||||||||||||||| |||||||| |
Sbjct  1344  AA-CGCTTGGG-GACATGCCGGA-GCTGTGGTGATGCAAGGTTTGTGCCTTGTACTAACT  1400

Query  1144  GTGGTGGTAGTACTAAAGTGTTTGAGGAAAAAGAAGATGGGTTTAAGAGATG-CAATGAA  1202
             ||| |||||| || ||||||||||| ||| |||| ||  |||||||| | || |  | ||
Sbjct  1401  GTGATGGTAGCACCAAAGTGTTTGAAGAACAAGATGAACGGTTTAAGCGGTGTCC-TAAA  1459

Query  1203  TGCAATGAGAATGGATTGGTACGTTGT  1229
             |||||||||||||||||||| ||||||
Sbjct  1460  TGCAATGAGAATGGATTGGTGCGTTGT  1486


 Score =  189 bits (102),  Expect = 6e-47
 Identities = 273/349 (78%), Gaps = 37/349 (11%)
 Strand=Plus/Plus

Query  318  TCTCCTGACTCAGTGATCAACACATGGGAGCTCATGAACGGCCTCGACGACGATTTCG-A  376
            |||||||| ||||| || ||||| |||||||| ||| | ||| | ||||| || |||| |
Sbjct  563  TCTCCTGATTCAGTCATAAACACTTGGGAGCTTATGGATGGCTTGGACGATGAATTCGAA  622

Query  377  CTCTGAGAATTCCGATACAAGTAAGCGTAATTCCGTCGTAAATTTGGATTGTTT-TTCTA  435
             || || |||||| | ||  |   | ||||   |||| |||||| ||||| |||  ||||
Sbjct  623  TTC-GA-AATTCCCAAAC-CG---G-GTAA--GCGTC-TAAATTCGGATT-TTTGCTCTA  671

Query  436  AACCC-ATCAAGAATC-GAGACGTG-GTTATTAATGGGTCTTCGTTGAAATTGGACGAAT  492
            ||||| | |  ||||| || | ||| ||| | ||||||||||||||||||||||| ||||
Sbjct  672  AACCCGA-CCCGAATCGGA-ATGTGAGTT-TAAATGGGTCTTCGTTGAAATTGGATGAAT  728

Query  493  CTTAC--GA-----AG-CT-GAGGAAGA--TTGGAGA-----TTAC--TGCCTTTTAAAC  534
            |||||  ||     ||  | || |||||   ||||||     || |  || ||| |||||
Sbjct  729  CTTACGAGATTGTGAGAATCGAAGAAGACGATGGAGATTGGGTTCCTTTGACTTATAAAC  788

Query  535  CTAAGCAACCTCTGTGGAAACATATGTCTGAAGAATCATTTCTCTCTGATTTAGATCCTA  594
            ||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |
Sbjct  789  CTAAGCAACCTTTGTGGAAGCATTTGTCTGAAGAATCATTTCTCTCTGATTTAGATCCCA  848

Query  595  ACATTATCTCATCTTACAAGAAAGCATTGTCTTCTAAGCAACTAAGCAA  643
             |||| ||||||| ||||||||||| ||||||||||||| | |||||||
Sbjct  849  GCATTGTCTCATCCTACAAGAAAGCTTTGTCTTCTAAGCTATTAAGCAA  897



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 62298876345


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5