BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg935037 Length=888 Score E Sequences producing significant alignments: (Bits) Value AT2G41835.1 | Symbols: | zinc finger (C2H2 type, AN1-like) fam... 1314 0.0 AT5G48205.1 | Symbols: | zinc ion binding | chr5:19546937-1954... 167 2e-40 > AT2G41835.1 | Symbols: | zinc finger (C2H2 type, AN1-like) family protein | chr2:17457786-17459568 REVERSE LENGTH=1228 Length=1228 Score = 1314 bits (711), Expect = 0.0 Identities = 831/889 (93%), Gaps = 8/889 (1%) Strand=Plus/Plus Query 1 GGAATTGTTGTTCGAATTCGAATGGGAACACCGGAATTTCCAGATCTGGGGAAACACTGC 60 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 134 GGAATTGTTGTTCGAATTCGAATGGGGACTCCGGAATTTCCAGATCTGGGGAAACACTGC 193 Query 61 TCCGTCGATGTTTGCAAGCAAATCGATTTCTTGCCCTTCACCTGCGACCGTTGCCTCCAG 120 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct 194 TCCGTCGATGTTTGCAAGCAAATCGATTTCTTGCCTTTCACCTGCGACCGTTGCCTACAG 253 Query 121 GTGTTTTGTTTGGATCATCGAAGCTATATGAAACATAGTTGTCCAAAAGGCGACAGAGAA 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 254 GTGTTTTGTTTGGATCATCGAAGCTATATGAAACATAGTTGTCCAAAAGGCGATAGAGAA 313 Query 181 GATGTAACCGTGGTTATCTGTCCGCTCTGTGCTAAAGGAGTCCGGTTAAACCCAAACGAA 240 ||||| || || |||||||| || |||||||||||||||||||| ||||||||||||||| Sbjct 314 GATGTGACTGTAGTTATCTGCCCACTCTGTGCTAAAGGAGTCCGATTAAACCCAAACGAA 373 Query 241 GACCCAAATATAACATGGGAGAAACATGTCAACACTGATTGTGACCCATCAAACTATGAA 300 |||||||||||||||||||||||||||||||| || || ||||||||||||||||| ||| Sbjct 374 GACCCAAATATAACATGGGAGAAACATGTCAATACCGACTGTGACCCATCAAACTACGAA 433 Query 301 AAAGCCACCAAGAAGAAGAAATGTCCGGTTCCAAGATGCAAGGAGCAACTAACATTCTCC 360 ||||| || ||||||||||||||||| |||||||||||||||||| | ||||| |||||| Sbjct 434 AAAGCTACAAAGAAGAAGAAATGTCCCGTTCCAAGATGCAAGGAGTACCTAACTTTCTCC 493 Query 361 AACACCATCAAGTGCCGGGATTGCAATATCGATCACTGCTTAAAACACCGTTTTGGACCT 420 ||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||||| Sbjct 494 AACACCATCAAGTGCCGAGATTGCAATGTCGATCACTGCTTGAAACATCGTTTTGGACCT 553 Query 421 GATCACACTTGCCCTGGACCAAGAAAACTCCCATTCATGGGTTTCTTGagtagtagtagt 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 554 GATCACACTTGCCCTGGACCAAGAAAACTCCCATTCATGGGTTTCTTGAGTAGTAGTACC 613 Query 481 agtagCAGCAGAAAAGAAGCTAAGACAACAAGACCCACCAAAGCTCATGCATCAACTTCA 540 | | ||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct 614 A----C--CAGAAAAGAAGCTAAGACAACAAGACCCAACAAAGCTCATCCATCAACTTCA 667 Query 541 tcttcttcttcttcttcAAGATGGTCCAATCTTCTATCTTCAGCAGAAGCAGGGATCAGC 600 || |||||||||||||| |||||||| ||||| |||||||||||||||||||| || ||| Sbjct 668 TCATCTTCTTCTTCTTCGAGATGGTCTAATCTCCTATCTTCAGCAGAAGCAGGAATTAGC 727 Query 601 AGGCTCGGTAACGACATTAGCCAGAAGCTACAGTTTTTGAGCAGCAGCAG-TGATGGTAT 659 ||||||||||| ||||||||||||||||||||||||| |||||||| || | ||||||| Sbjct 728 AGGCTCGGTAATGACATTAGCCAGAAGCTACAGTTTTCGAGCAGCAA-AGATAATGGTAT 786 Query 660 CGTGGAGGTGTGTCCACAGTGCGGTGCGAAATTCTCTTCAGTTACTACTCTTGTGGAACA 719 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 787 CGTGGAGGTGTGTCCACAGTGCGGTGCGAAATTCTCTTCGGTTACTTCTCTTGTGGAACA 846 Query 720 TGTAGAGAAAACACATGAGAGGAACAGGAAGCAGAATCATGGCAATGTCACAGTCGATGT 779 |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct 847 TGTAGAGAAAACACATGAGAGGAACAAGAAGCAGAATCATGGCAATGTCACGGTCGATGT 906 Query 780 CTGCCCTAAATGTAGCAGAGGATTCCGCGATCCAGTAGATCTTGTGAATCATATCGAAAG 839 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 907 CTGCCCTAGATGTAGCAGAGGATTCCGCGATCCAGTAGATCTTGTGAACCATATCGAAAG 966 Query 840 AGAACACCGAGGTACTTCTAAAGCATAGGAACATAGGCGTTCACAAGCC 888 ||| |||||||| ||||| |||||||||||||||| ||||| ||||||| Sbjct 967 AGATCACCGAGGCACTTCGAAAGCATAGGAACATATGCGTTTACAAGCC 1015 > AT5G48205.1 | Symbols: | zinc ion binding | chr5:19546937-19547787 REVERSE LENGTH=576 Length=576 Score = 167 bits (90), Expect = 2e-40 Identities = 116/129 (90%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 22 ATGGGAACACCGGAATTTCCAGATCTGGGGAAACACTGCTCCGTCGATGTTTGCAAGCAA 81 ||||| || ||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct 1 ATGGGGACTCCGGAATTTCCAGATCTAGGGAAACACTGCTCCGTCGATGTTTGCACGCAG 60 Query 82 ATCGATTTCTTGCCCTTCACCTGCGACCGTTGCCTCCAGGTGTTTTGTTTGGATCATCGA 141 |||||||||||||||||||| || || || ||||| |||||| |||||||||||||| | Sbjct 61 ATCGATTTCTTGCCCTTCACATGTGATCGCTGCCTTCAGGTGCTTTGTTTGGATCATTGT 120 Query 142 AGCTATATG 150 ||||||||| Sbjct 121 AGCTATATG 129 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43352068861 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5