BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg935043
Length=2323
Score E
Sequences producing significant alignments: (Bits) Value
AT2G41890.1 | Symbols: | curculin-like (mannose-binding) lecti... 3602 0.0
> AT2G41890.1 | Symbols: | curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein | chr2:17478058-17480352
REVERSE LENGTH=2295
Length=2295
Score = 3602 bits (1950), Expect = 0.0
Identities = 2183/2296 (95%), Gaps = 14/2296 (1%)
Strand=Plus/Plus
Query 18 AAGATGTTTCGAGCTCTGCTTTTGTCTCTCTCTCTAGGGTTCTTCTTGGCGTTTCAGTTT 77
|||||| |||||||||||||||||| ||||||| ||| ||||||||||||||||||| ||
Sbjct 4 AAGATGCTTCGAGCTCTGCTTTTGTGTCTCTCTTTAGTGTTCTTCTTGGCGTTTCAGATT 63
Query 78 GTGGTTTCAGAGATTCAACTGGGTTCT-AGACTCGTTGTTGGTGAAAACAGCTTGTGGGT 136
|| ||||||||||||||| | |||||| || ||||||||||||||||||| |||||||||
Sbjct 64 GTTGTTTCAGAGATTCAATTAGGTTCTAAG-CTCGTTGTTGGTGAAAACACCTTGTGGGT 122
Query 137 ATCCAACAATGGTGATTTTGCTCTAGGGTTTTTCAATCCCCCTGGTTTACCTAACCGGTT 196
||||||||||||||||||||||||||| ||||| ||||| |||||||| | ||| |||||
Sbjct 123 ATCCAACAATGGTGATTTTGCTCTAGGTTTTTTTAATCCACCTGGTTTGCTTAATCGGTT 182
Query 197 CAGCATTGGTATCCGGTTTAACTCCAATTCAATTCCTTCTGATCAACGGAAGGTCGTTTG 256
||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 183 CAGCATTGGTATCTGGTTTAACTCCAATTCAATCCCTTATGATCAACGGAAGGTCGTTTG 242
Query 257 GGTTGCTGGAGCAGATGTTGTCGTTTCTGATAACAGCTCTTACTTTGAGCTTACTCGTGA 316
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 243 GGTTGCTGGAGCAGGTGTTGTCGTTTCTGATAACAGCTCTTACTTTGAGCTTACTCGTAA 302
Query 317 TGGAGAGTTGGTTTTGTGTGATTCTTCGTTAGGTGCTCCGGTTTGGAACAGCAAGACGAA 376
|||||| |||||||||| |||||||| ||| |||| |||||||||||| |||||||||||
Sbjct 303 TGGAGAATTGGTTTTGTTTGATTCTTTGTTGGGTGTTCCGGTTTGGAATAGCAAGACGAA 362
Query 377 CCGGTTCTCTGTATCCTCTGCTTTGCTTCGTGATGATGGTAATCTTGTGTTGTTGAAAGA 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 363 CCGGTTCTCTGTATCCTCTGCTTTGCTTCGTGATGATGGTAATCTTGTGTTGTTGAAAGA 422
Query 437 TAGAGAAGAGATCGTTTGGCAAAGCTTTGGTACTCCTACTGATACTCTGCTTCCAAACCA 496
|||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 423 TAGAGAAGAGATTGTTTGGCAAAGCTTTGGTACTCCAACTGATACTTTGCTTCCAAACCA 482
Query 497 AAAGTTGCCAGCTTTTGAGATGTTAAGAGCTGCTAGT--G-ATTCGAGGTCTAGTTATTA 553
|||||| |||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 483 AAAGTTTCCAGCTTTTGAGATGTTAAGAGCTGCTAGTGAGAATTCGAGGTCTAGTTATTA 542
Query 554 CAGTCTTCACTTGGAGGATTCGGGGCGGTTAGAGCTGAGATGGGAGAGTAGCATTACTTT 613
|||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 543 TAGTCTTCACTTGGAGGATTCGGGGAGGTTAGAGCTGAGATGGGAGAGTAACATTACTTT 602
Query 614 CTGGTCAAGCGGAAACGAAGTTGTgaagaagaagaagaagaagaTGAATATTGGGGCTGT 673
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 603 TTGGTCAAGCGGAAACGAAGTTGTGAAGAAGAAGAAGAAGAAGAAGAATATTGGGGCTGT 662
Query 674 TCTTACTTCTGAGGGAGCTCTGTTTCTTGAGGATCAAGATCTGATGAGACCTGTTTGGTC 733
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 TCTTACTTCCGAAGGAGCTCTGTTTCTTGAGGATCAAGATCTGATGAGACCTGTTTGGTC 722
Query 734 TGTTTTTGGGGAAGATCATAACGACACTGTGAAGTTCCGGTTTCTCAGGCTTGACAGAGA 793
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||
Sbjct 723 TGTTTTTGGGGAAGATCATAACGACACTGTGAAGTTCCGGTTTCTTAGGCTTGACCGGGA 782
Query 794 TGGTAATCTGAGAATGTACTCGTGGAATGATGTA-TC-AGGAATTTGGAAACCGGTTTGG 851
||||||||||||||||||||||||||| || | | || ||| ||||||||||||||||||
Sbjct 783 TGGTAATCTGAGAATGTACTCGTGGAACGA-GGATTCAAGG-ATTTGGAAACCGGTTTGG 840
Query 852 CAAGCTGTTGAGAATCAGTGTCGTGTTTTCGCGACCTGTGGATCGCAAGTTTGTTCCTTT 911
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 841 CAAGCTGTTGAGAATCAGTGTCGTGTTTTCGCAACCTGTGGTTCGCAAGTTTGTTCCTTT 900
Query 912 AACAGTTCTGGATACACCGAATGCAGTTGCCCTTTTAATGCTTTCGTATCGGCCTCGGAT 971
||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||
Sbjct 901 AACAGTTCTGGATACACCGAATGCAATTGCCCTTTTAATGCTTTTGTATCGGTCTCGGAT 960
Query 972 CCTAAATGTTTGGTGCCTTATCAGAAGCCAGGCTGCAAATCTGGTTTCGACATGGTGAAA 1031
|||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 961 CCTAAATGCTTGGTGCCTTATCAGAAGCCAGGCTGCAAATCTGGTTTCAACATGGTGAAG 1020
Query 1032 TTCAAGAACTTGGAGTTGTATGGGATCTACCCGGCTAATGATTCTGTTGTTTCTCAGATT 1091
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 1021 TTCAAGAACTTGGAGTTGTATGGGATCTACCCGGCTAATGATTCTGTTATCTCTCAGATT 1080
Query 1092 AACTCCCAGAGATGCAAGAAGTTGTGTTTAGAGGATTCTGCTTGTACTGCGGTTACTTAC 1151
| ||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||
Sbjct 1081 AGCTCCCAGAGATGCAAGAAGTTGTGTTTAGAGAATTCTGCTTGTACTGCAGTCACTTAC 1140
Query 1152 ACGAACGATGGGGATCCTCAATGTCGCATGAAGCTGACCCGATATATCAGCGGTTACTCT 1211
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 ACGAACGATGGAGAGCCTCAATGTCGCATGAAGCTGACCCGATATATCAGCGGTTACTCT 1200
Query 1212 GATCCATCTCTGAGTTCGATATCATATGTTAAAACATGTTTGGACCCGATTGCTGTCGAT 1271
|| || ||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 1201 GACCCGTCTCTGAGTTCGATATCATATGTTAAAACATGTTTGGACCCAATTGCTGTTGAT 1260
Query 1272 CC--A-AATGTTTCTAAAGAGTCACCAGTGCCTGTAACAAAGTCTCACAGTATCTGTCTT 1328
|| | |||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1261 CCAAATAATGTTTCTAAAGAGTCACCAGTGACTGTAACAAAGTCTCACAGTATCTGTATT 1320
Query 1329 CCTTGTCTTGTCGCG-GCAACTTCCATTACACTTGTTCTGTTTCTCGGATTTCAGCTCGG 1387
||||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||
Sbjct 1321 CCTTGTCTTGTCG-GTGCAACTTCCACTACACTTGTTCTGTTTCTTGGATTTCAGCTCGG 1379
Query 1388 TATCGTTGTGTACATTTACCAGAGGAAGAAGAAGCTAGCTAAGAAGAAAGCTGATCGATT 1447
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 1380 TATCGTTGTGTACATTTACCGGAGGAAGAAGAAGCTAGCTAAGAAGAAAGCTGAACGATT 1439
Query 1448 CTCCAAAGCTACAAATCCGAAATGTTTGATGATATTCTCTGTTGATGAGATTAAGGCCAT 1507
||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1440 CTCCAAAGCGACAAATCCGAAAGGTGTGATGATATTCTCTGTTGATGAGATTAAGGCCAT 1499
Query 1508 GACCGATAACTTTGACCATAACATAGGACCGCAGATATTCAAAGGGGTTATGCCGGAGAA 1567
|||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1500 GACCGATAACTTTGACAATAACATAGGACCACAGATATTCAAAGGGGTTATGCCGGAGAA 1559
Query 1568 TGAACTTGTTGCTGTTAAAGAAGTGGAATCAACATTAACAGAAGAAAGGAAGTTTAGGAG 1627
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1560 TGAACTTGTTGCTGTTAAAGAAGTGGAAGCAACATTAACAGAAGAAAGGAAGTTTAGGAG 1619
Query 1628 CTCTGCATCAAAGATAGGAACAATGCATCACAAGAACCTAGCAAAGCTTGAAGGTTATTG 1687
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1620 CTCTGCATCCAAGATAGGAACAATGCATCACAAGAACCTAGCAAACCTTGAAGGTTATTG 1679
Query 1688 CTGCGAGCTAGGCAGGAGGTTTCTGGTTTACGAATACGCTAAGAACGGGTCTATACTTGA 1747
|||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct 1680 CTGCGAGCTAGGCAGGAGGTTTCTGGTTTACGAATATGCTAAGAATGGATCTATACTTGA 1739
Query 1748 CCACATTGTTGACCCTTTACGAAGCAAGAAACTAACTTGGAGAATAAGAACTGAAACCTG 1807
||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 1740 CCATATTGTTGACCCTTTACGAAGCAAGAAACTAACTTGGAGGATAAGAACTGATACCTG 1799
Query 1808 CTTAAGCGTGGCTAAAGCTCTCTGTTACCTCCACACGGAATGCAGAGAATTTGTCAGTCA 1867
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 1800 CTTAAGCGTGGCTAAAGCTCTTTGTTACCTCCACATGGAATGCAGAGAATTTGTCAGTCA 1859
Query 1868 TGGGAACTTGAACTGCGGAAACATTCTGCTCGGGGAGGCTTTGGAATCTAAGTTAACAGA 1927
|||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||
Sbjct 1860 TGGGAACTTGAACTGCGGAAACATTCTGCTTGGGGAGGATTTGGAAGCTAAGTTAACAGA 1919
Query 1928 ATACGGATTCGGTTTATGTGCTGCAGATAAAGACGTTGAAGATTTTGGAAAGACTGTTTT 1987
||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1920 ATATGGATTCGGTTTATGTGCTGCAGATAAAGATGTTGAAGATTTTGGAAAGACGGTTTT 1979
Query 1988 AGCTCTAATAACGGGTAGGTACGAACCAGATGGAGTAGTGAGTGAATGGGTGTATAGAGA 2047
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1980 AGCTCTAATAACGGGTAGGTACGAACCAGAAGGAGTAGTGAGTGAATGGGTGTATAGAGA 2039
Query 2048 GTGGATTGAAGGGAGGAAAGAAACCGTTGTGGACAAAAGATTAGAAGGATGTTTCGATGT 2107
|||||||| ||| ||||||||||||||||| |||||| ||||||||||||| ||||||||
Sbjct 2040 GTGGATTGGAGGAAGGAAAGAAACCGTTGTAGACAAAGGATTAGAAGGATGCTTCGATGT 2099
Query 2108 AGAGGAGCTCGAGCGGGTTTTGAGAATCTCATTTTGGTGTGTTCAGACGGATGAACGATT 2167
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2100 AGAGGAGCTTGAGCGGGTTTTGAGAATCTCATTTTGGTGTGTTCAGACGGATGAACGATT 2159
Query 2168 AAGACCATCAATGGGGGAAGTGGTGAAGGTTTTGGAAGGTACATTGTCTGTTGATCCACC 2227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2160 AAGACCATCAATGGGGGAAGTGGTGAAGGTTTTGGAAGGTACATTGTCTGTTGATCCACC 2219
Query 2228 ACCGCCGCCTTTTGCTTGTGCAAGATCATCGCCGACTAACTCGTCAGAGTCTAGTCAATC 2287
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2220 ACCACCGCCTTTTGCTTGTGCAAGATCATCGCCCACTAACTCGTCAGAGTCTAGTCAATC 2279
Query 2288 GTTGTACGAGCCATAA 2303
||||||||||||||||
Sbjct 2280 GTTGTACGAGCCATAA 2295
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 115310651865
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5