BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg935069
Length=1150
Score E
Sequences producing significant alignments: (Bits) Value
AT2G42100.1 | Symbols: | Actin-like ATPase superfamily protein... 1099 0.0
AT2G42170.1 | Symbols: | Actin family protein | chr2:17577714-... 1013 0.0
AT2G42090.1 | Symbols: ACT9 | actin 9 | chr2:17556744-17558369 ... 887 0.0
AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779174-157... 553 2e-156
AT5G59370.1 | Symbols: ACT4 | actin 4 | chr5:23949739-23951837 ... 547 7e-155
AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18215872-18218313 ... 536 2e-151
> AT2G42100.1 | Symbols: | Actin-like ATPase superfamily protein
| chr2:17560211-17561945 FORWARD LENGTH=1137
Length=1137
Score = 1099 bits (595), Expect = 0.0
Identities = 951/1119 (85%), Gaps = 40/1119 (4%)
Strand=Plus/Plus
Query 31 CTATCGTGTGTGACAACGGAACTGGAATGATCAAGGCGGGATTAGCTGGAGATGATGCAC 90
|||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||
Sbjct 29 CTATCGTGTGTGACAATGGAACTGGAATGGTCAAGGCGGGATTCGCTGGAGACGATGCAC 88
Query 91 CAAAG-GCTATGTTTCCAAGCATCATGGGTCGTCCAAGACACAAGAGG-GTGATGCTTGG 148
| ||| ||| ||||||||||| | ||||||||||| ||||| || || |||||| | ||
Sbjct 89 C-AAGAGCTGTGTTTCCAAGCGTTGTGGGTCGTCCACGACAC-AGGGGAGTGATGGTAGG 146
Query 149 AATGGATCAGAAAGA-ATTTTATGTGGGAGACGAAGCTCAAGCCAAGAGAGGTATTCTTA 207
||||||| |||| || | || ||||||||||||||||||||||| |||||||||||||
Sbjct 147 AATGGATGAGAAGGATACCTT-TGTGGGAGACGAAGCTCAAGCCAGGAGAGGTATTCTTT 205
Query 208 CACTTAAATACCCAATGGAGCATGGTATCGTTAACAATTGGGATGACATGGAGAAGATTT 267
|||||||||||||||| || || ||| | |||| ||||||||||||||||||||||||||
Sbjct 206 CACTTAAATACCCAATCGAACACGGTGTTGTTAGCAATTGGGATGACATGGAGAAGATTT 265
Query 268 GGCATCATACTTTCCACAACGAGCTACGTGTGGCTCCTCAAGAACACCCTGTGCTTCTCA 327
|||| |||||||| |||| ||||| ||| ||| ||| ||||||||||| | |||||||
Sbjct 266 GGCACCATACTTTTTACAATGAGCTGCGTTTGGAACCTGAAGAACACCCTATTCTTCTCA 325
Query 328 CTGACTCTCCTCTAAACCCTAAGGCCAATCGTGAGAAGATGGCTCAGATCATGTTTGAGA 387
|||| ||||||| ||||| |||| ||||||||| |||||| |||||||||||||||||
Sbjct 326 CTGAAGCTCCTCTTAACCCAAAGGTCAATCGTGAAAAGATGACTCAGATCATGTTTGAGT 385
Query 388 CCTTCAATACTCCT-GCTACGTACGT-GGCCGTTCAGGCCGTTCTCGCTCTCTATGCTAG 445
| || | |||| | || ||| | || |||||||||||||| |||||||| | ||
Sbjct 386 CATTTGCTTTTCCTAG-TATGTATATTGGTA-TTCAGGCCGTTCTCTCTCTCTATTCCAG 443
Query 446 TGGTCGTACCTCAGGTATTGTGTTAGATTCAGGAGATGGTGTGAGCCACATAGTTCCAAT 505
|||||||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct 444 TGGTCGTACCACAGGTATTGTGTTGGATTCAGGAGATGGTGTGAGCCACACAGTTCCAAT 503
Query 506 CTACCATGGTTACACACTCCCACATGCGAT-TATGCGTCTAGA-CTTAGCAGGCCGTGAC 563
|||| | ||||| ||||||| |||||||| | |||||||||| || |||||||||||||
Sbjct 504 CTACGAAGGTTATGCACTCCCGCATGCGATCT-TGCGTCTAGATCT-AGCAGGCCGTGAC 561
Query 564 CTAACCGACTACCTCATGAATATTATGATGGAACGTGGCTACACATATACCACATCAGCG 623
|||||||| || || | ||| || ||||||||||||||||||||||| |||||||| ||
Sbjct 562 CTAACCGAGTATCTGACGAAAATCATGATGGAACGTGGCTACACATACACCACATCCGCC 621
Query 624 GAGCGGGAGATCGTCCGAGACATCAAAGAGAAA-TTATGTTATGTAGCTCTCGACTACGA 682
||||| ||||| |||||||||||||||||||| || ||||| ||||| | ||||||||
Sbjct 622 GAGCGTGAGATAGTCCGAGACATCAAAGAGAAGCTT-TGTTACATAGCTGTTGACTACGA 680
Query 683 GCAAGAACTGGAGAACGCTACAAC-A--T----A--C-A-A-AACCTACGAGCTTCCCGA 730
||||||| ||||||| |||||||| | | | | | | ||||||||||||||| ||
Sbjct 681 GCAAGAAATGGAGAAGGCTACAACGAGCTCGGCAATCGATAGAACCTACGAGCTTCCGGA 740
Query 731 TGGTCAAGTGATCAC-ACTAGGTGCCGAGAGGAT-CAGGTGCCCTGAGGTTCTTTTCCAG 788
||||||||||||||| | |||| || ||||| || |||||||||||||||||||||||||
Sbjct 741 TGGTCAAGTGATCACGA-TAGGAGCTGAGAG-ATTCAGGTGCCCTGAGGTTCTTTTCCAG 798
Query 789 CCGTCTTTGGTCGGGATGGAATCTTCTGGTATTCATGAGATGACTTACAAGTCGATTATG 848
|||||||| | || |||||| |||||||||||||||||| ||||||||| ||||| |||
Sbjct 799 ACGTCTTTGATTGGCATGGAAACTTCTGGTATTCATGAGACGACTTACAATTCGATCATG 858
Query 849 AAGTGTGATGTTGATATAAGGAAAGATTTGTATGGAAACATTGTCATGAGTGGTGGCACA 908
||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 859 AAGTGTGATGTGGATATAAGGAAGGATTTGTATGGAAACATTGTGTTGAGTGGTGGCACG 918
Query 909 ACGATGTTCCCTGGGATCGC-GCAGAGGATGTGCAAAGAGATCAGTGCGCTTGCACCAGC 967
||||||||||| ||||| || | | |||||| ||||||||||| |||||||||||| ||
Sbjct 919 ACGATGTTCCCGGGGATTGCAG-ATAGGATGAACAAAGAGATCAATGCGCTTGCACC-GC 976
Query 968 -TAATATGAAGATTAAAGTTGTGATTCCTCCGGGGAG-AAAGTATAGTGCTTGGATTGGA 1025
|| ||||||||| ||||||||| |||||| | || ||| ||||||| |||| |||||
Sbjct 977 CTAGTATGAAGATAAAAGTTGTGGCTCCTCCCGAAAGGAAA-TATAGTGTTTGGGTTGGA 1035
Query 1026 GGCTCCATTTTGGCTTCTCTAAGTTCCTTTGAACAAAAGTGGATAACTAAGGCTGAGTAT 1085
||||||||| ||||||||||||| ||||| || | |||||| ||||| |||||||||
Sbjct 1036 GGCTCCATTCTGGCTTCTCTAAGCAGCTTTGCACCGATGTGGATTACTAAAGCTGAGTAT 1095
Query 1086 GAAGAAACTGG-AGCGGCGATTGTTCACAAGAAATGCTT 1123
|| ||| | || || |||||||||||||| |||||||||
Sbjct 1096 GACGAA-CAGGGAGGGGCGATTGTTCACAGGAAATGCTT 1133
> AT2G42170.1 | Symbols: | Actin family protein | chr2:17577714-17580392
FORWARD LENGTH=1402
Length=1402
Score = 1013 bits (548), Expect = 0.0
Identities = 942/1124 (84%), Gaps = 60/1124 (5%)
Strand=Plus/Plus
Query 31 CTATCGTGTGTGACAACGGAACTGGAATGATCAAGGCGGGATTA-GCTGGAGATGATGCA 89
|||||||||||||||| |||||||||||||||||||| ||| || |||||||| ||||||
Sbjct 134 CTATCGTGTGTGACAATGGAACTGGAATGATCAAGGCAGGA-TATGCTGGAGAAGATGCA 192
Query 90 CCAAAG-GCTATGT-TTCCAAGCATC-ATGGGTCGTCCAAGACACAAGAGG-GTGATGCT 145
|| ||| | | ||| ||||||||| | ||||||||||| ||| | | || | |||| |
Sbjct 193 CC-AAGTG-T-TGTGTTCCAAGCA-CTGTGGGTCGTCCACCACATACG-GGAGGGATGGT 247
Query 146 TGGAATGGATCAGAAAGAATTT-TATGTGGGAGACGAAGCTCAAGCCAAGAGAGGTATTC 204
|||||| || |||| | |||| | |||||||||||| ||| |||||| ||| ||||| |
Sbjct 248 AGGAATGAATGAGAACG-ATTTATTTGTGGGAGACGACGCTGAAGCCAGGAGCGGTATAC 306
Query 205 TTACACTTAAATACCCAATGGAGCATGGTATCGTTAACAATTGGGATGACATGGAGAAGA 264
|||||||| | |||||||||||||| ||| | |||| |||||||||||||||||||||||
Sbjct 307 TTACACTTGACTACCCAATGGAGCACGGTGTTGTTAGCAATTGGGATGACATGGAGAAGA 366
Query 265 TTTGGCATCATAC-TTTCCACAACGAGCTACGTGTGGCTCCTCAAGAACACCCTGTGCTT 323
||||| | ||||| ||| ||| |||||||||||||||||| |||||||||||||||||
Sbjct 367 TTTGGTACCATACGTTT-TACAGTGAGCTACGTGTGGCTCCTGAAGAACACCCTGTGCTT 425
Query 324 CTCACTGACTCTCCTCTAAACCCTAAGGCCAATCGTGAGAAGATGGCTCAGATCATGTTT 383
|||||||| ||||||| ||||| || ||| |||||||||||||| ||||||||||||||
Sbjct 426 CTCACTGAAGCTCCTCTTAACCCGAAAGCCGATCGTGAGAAGATGACTCAGATCATGTTT 485
Query 384 GAGACCTTCAATACTCCT-GCTACGTA-CGTGGCCGTTCAGGCCGTTCTCGCTCTCTATG 441
||||| || | |||| | || ||| ||| | ||||||| |||| | ||| |||
Sbjct 486 GAGACATTTGCTGTTCCTAG-TATGTATATTGG-TATGCAGGCCGCTCTCTCCCTCCATG 543
Query 442 CTAGTGGTCGTACCTCAGGTATTGTGTTAGATTCAGGAGATGGTGTGAGCCACATAGTTC 501
| |||||||||||| |||||| |||||| ||||||||||||||||||||| |||||||||
Sbjct 544 CCAGTGGTCGTACCACAGGTACTGTGTTGGATTCAGGAGATGGTGTGAGCTACATAGTTC 603
Query 502 CAATCTACCATGGTTACA-CACTCCCACATGCGAT-TATGCGTCTAGACTTAGCAGGCCG 559
|||||||| | |||| || ||||||||||||| || | |||| ||||| |||||||||||
Sbjct 604 CAATCTACGAAGGTT-CAGCACTCCCACATGCAATCT-TGCGGCTAGATTTAGCAGGCCG 661
Query 560 TGACCTAACCGACTACCTCATGAATATTATGATGGAACGTGGCTACACATATACCACATC 619
| |||||||| ||||||||||||| || |||||||||||||||||||| || | |
Sbjct 662 TCACCTAACCAACTACCTCATGAAAATCATGATGGAACGTGGCTACAC--AT----C--C 713
Query 620 AGCGGAGCGGGAGATCGTCCGAGACATCAAAGAGA-AATTAT-GTTATGTAGCTCTCGAC 677
|| ||||| ||| | ||||||||||||||||| | |||| | |||| ||||||| |||
Sbjct 714 -GCCGAGCGTGAGGTAGTCCGAGACATCAAAGA-ACAATT-TGGTTACATAGCTCTTGAC 770
Query 678 TACGAGCAAGAACTGGAGAACGCTAC-AACA--T-----A-C-A-A-AACCTACGAGCTT 725
|||||||||||| ||||||| ||||| || | | | | | | |||||||||||||
Sbjct 771 TACGAGCAAGAAATGGAGAAGGCTACAAAGAGTTCGGCAATCGATAGAACCTACGAGCTT 830
Query 726 CCCGATGGTCAAGTGATCAC-ACTAGGTGCCGAGAGGA-TCAGGTGCCCTGAGGTTCTTT 783
|| ||||||||||||||||| | |||| || |||| || |||||||||||||||||||||
Sbjct 831 CCAGATGGTCAAGTGATCACGA-TAGGAGCTGAGA-GATTCAGGTGCCCTGAGGTTCTTT 888
Query 784 TCCAGCCGTCTTTGGTCGGGATGGAATCTTCTGGTATTCATGAGATGACTTACAAGTCGA 843
|||||||||||||| | || |||||| |||||||||||||||||| ||||||||| || |
Sbjct 889 TCCAGCCGTCTTTGATTGGAATGGAAACTTCTGGTATTCATGAGAAGACTTACAATTCAA 948
Query 844 TTATGAAGTGTGATGTTGATATAAGGAAAGATTTGTATGGAAACATTGTCATGAGTGGTG 903
| ||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||
Sbjct 949 TCATGAAGTGTGATGATGATATAAGGAAGGATTTGTATGGAAACATTGTGTTGAGTGGTG 1008
Query 904 GCACAACGATGTTCCCTGGGATCGC-GCAGAGGATGTGCAAAGAGATCAGTGCGCTTGCA 962
| || |||||||||| ||||| | | |||||||| ||||||||||| ||||||||||
Sbjct 1009 GGACGACGATGTTCCGAGGGATTGAAG-AGAGGATGACCAAAGAGATCAATGCGCTTGCA 1067
Query 963 -CCAGCTAATATGAAGATTAAAGTTGT-GATTCCTCCGGGGAG-AAAGTATAGTGCTTGG 1019
|| |||||||||| ||||||| |||| | | || |||| || ||| ||||||| ||||
Sbjct 1068 GCC-GCTAATATGAGGATTAAAATTGTTGCTCCC-CCGGAAAGGAAA-TATAGTGTTTGG 1124
Query 1020 ATTGGAGGCTCCATTTTGGCTTCTCTAAGTTCCTTTGAACAAAAGTGGATAACTAAGGCT 1079
||||||||||||||||||||||||||||| | | |||||| | |||||| ||||| |||
Sbjct 1125 ATTGGAGGCTCCATTTTGGCTTCTCTAAGCACATATGAACAGATGTGGATTACTAAAGCT 1184
Query 1080 GAGTATGAAGAAACTGGAGCGGCGATTGTTCACAAGAAATGCTT 1123
||||||||||||| |||| |||| |||||||||| |||||||||
Sbjct 1185 GAGTATGAAGAAAATGGACCGGCCATTGTTCACACGAAATGCTT 1228
> AT2G42090.1 | Symbols: ACT9 | actin 9 | chr2:17556744-17558369
FORWARD LENGTH=1101
Length=1101
Score = 887 bits (480), Expect = 0.0
Identities = 922/1126 (82%), Gaps = 67/1126 (6%)
Strand=Plus/Plus
Query 28 AGCCTATCGTGTGTGACAACGGAAC-TGGAATGAT-CAAGGCGGGATTAGCTGGAGATGA 85
||||||||||||||||||| || || ||||||| | | |||||||||| |||||||| ||
Sbjct 5 AGCCTATCGTGTGTGACAA-GGGACATGGAATGGTGC-AGGCGGGATTTGCTGGAGACGA 62
Query 86 TGCACCAAAGGCTATGTTTCCAAGCATCATGGGTCGTCCAAGACACAAGAGGGTGATGCT 145
|||||||||| | |||||||| | || ||||||||||||| ||| || | |
Sbjct 63 AGCACCAAAGGTTGTGTTTCCATGTGTCGTGGGTCGTCCAAG-----AGA---TG--GAT 112
Query 146 TGGAATGGATCAGAAAGAATTTTATGTGGGAGACGAAGCTCAAGCCAAGAGAGGTATTCT 205
| | | ||| ||| |||| |||||||||||| |||| ||| ||||| |||| ||||||
Sbjct 113 T-G-A---ATCCGAACGAATCTTATGTGGGAGAAGAAGGTCATGCCAACAGAGATATTCT 167
Query 206 TACACTTAAATACCCAATGGAGCATGGTATCGTTAACAATTGGGATGACATGGAGAAGAT 265
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 168 CACACTTAAAGACCCAATGGAGCATGGTATCGTTAACAATTGGGATGACATGGAGAAGAT 227
Query 266 TTGGCA-TCATACTTTCCACAACGAGCTACGTGTGGCTCCTCAAGAACACCCTGTGCTTC 324
|||||| | |||||||| |||||||||||||||||| |||| ||||||||||||| ||||
Sbjct 228 TTGGCACT-ATACTTTCTACAACGAGCTACGTGTGGATCCTGAAGAACACCCTGTACTTC 286
Query 325 TCACTGACTCTCCTCTA-AACCCTAAGGCCAATCGTGAGAAGATGGCTCAGATCATGTTT 383
||||||| ||||| || |||||||| |||||||||||||| ||| ||||||||||||||
Sbjct 287 TCACTGAAGCTCCT-TATAACCCTAAAGCCAATCGTGAGAAAATGACTCAGATCATGTTT 345
Query 384 GAGACCTTCAATACTCCTGCTACGTACGTGGCCGTTCAGGCCGTTCTCGCTCTCTATGCT 443
|||| ||| || |||||||| |||||| || | || | ||||| ||||||| |
Sbjct 346 GAGAGCTTTGATGTTCCTGCTATGTACGTCTCCATGCAATCTGTTCTTTATCTCTATTCC 405
Query 444 AGTGGTCGTACCTCAGGTATTGTGTTAGATTCAGGAGAT-GGTGTGAGCCACATAGTTCC 502
|||||||||||| ||||| ||||||| |||| |||||| || |||||||||| ||||||
Sbjct 406 AGTGGTCGTACCACAGGTGTTGTGTTGGATTTAGGAGAGAGG-GTGAGCCACACAGTTCC 464
Query 503 AATCTACCATGGTTACACACTCCCACATGCG-ATTA-TGCGTCTAGAC-TTAGCAGGCCG 559
| | ||| | |||||| |||||||||| | | || | | ||||||||| || | ||||||
Sbjct 465 AGTATACGAAGGTTACGCACTCCCACACG-GTAT-ACTTCGTCTAGACCTTGG-AGGCCG 521
Query 560 TGACCTAACCGACTACCTCAT-GAATATTATGATGGAACGTGGCTACACATATACCACAT 618
||||||||| ||||||||||| ||| || |||| ||||||||||||||||| |||||||
Sbjct 522 TGACCTAACTGACTACCTCATAGAA-ATCATGACCGAACGTGGCTACACATACACCACAT 580
Query 619 CAGCGGAGCGGGAGATCGTCCGAGACATCAAAGAGAAA-TTATGTTATGTAGCTCTCGAC 677
| || |||||||| || |||||||||||||||||||| || ||||| ||||| ||||||
Sbjct 581 CCGCCGAGCGGGAAATAGTCCGAGACATCAAAGAGAAGCTT-TGTTACGTAGCACTCGAC 639
Query 678 TACGAGCAAGAACTGGAGAACG-CTACAA---------CA-T--ACAAAACCTACGAGCT 724
|||||||||||| ||||||| | | |||| || | | |||||||||| |||
Sbjct 640 TACGAGCAAGAAATGGAGAA-GACAACAAAGGGTTGGACAATCGATAAAACCTACGTGCT 698
Query 725 TCCCGATGGTCAAGTGATCAC-ACTAGGTGCCGAGAGGAT-CAGGTGCCCTGAGGTTCTT 782
|||||||||||||| |||||| | ||| |||||||| || || |||||| |||||||||
Sbjct 699 TCCCGATGGTCAAGAGATCACGA-TAGAAGCCGAGAG-ATTCATGTGCCCCGAGGTTCTT 756
Query 783 TTCCAGCCGTCTTTGGTCGGGATGGAATCTTCTGGTATTCATGAGATGACTTACAAGTCG 842
|||||||||||| || |||| | |||||||||||||||||| ||| |||| ||| ||
Sbjct 757 TTCCAGCCGTCTGTGATCGGAAAGGAATCTTCTGGTATTCACGAGGCGACTCGCAATTCC 816
Query 843 AT-TATGAAGTGTGATGTTGATATAAGGAAAGATTTGTATGGAAACATTGTCATGAGTGG 901
|| | |||||||| |||||||| |||| ||| ||||||| |||||| | |||| |||
Sbjct 817 ATCT-TGAAGTGTCCTGTTGATACGAGGAGGGATATGTATGGTAACATTTTGATGACTGG 875
Query 902 TGGCACAACGATGTTCCCTGGGATCGC-GCAGAGGATGTGCAAAGAGATCAGTGCGCTTG 960
|||||| |||||||| | |||||| | | || ||| ||||||| | | ||| ||||
Sbjct 876 TGGCACGACGATGTTACATGGGATTAAAGAA-AGAATGACCAAAGAGCTAAATGCACTTG 934
Query 961 CACCAG-CTAATATGAA-GATTAAAGTTGT-GATTCCTCCGGGGAGAAAGTATAGTGCTT 1017
||| | | | |||||| | |||||||||| | ||||||||| || ||| ||||| ||
Sbjct 935 TACC-GTCGAGTATGAAAG-TTAAAGTTGTAG-TTCCTCCGGAAAGTGAGTGTAGTGTTT 991
Query 1018 GGATTGGAGGCTCCATTTTGGCTTCTCTAAGTTCCTTTGAACAAAAGTGGATAACTAAGG 1077
||||||||||||||||||||||||||||||| ||||| | || | ||||||||||||||
Sbjct 992 GGATTGGAGGCTCCATTTTGGCTTCTCTAAGCACCTTTCACCAGATGTGGATAACTAAGG 1051
Query 1078 CTGAGTATGAAGAA-ACTGGAGCGGCGATTGTTCACAAGAAA-TGC 1121
||| ||||||||| | |||||||||||||||||||| |||| |||
Sbjct 1052 ATGAATATGAAGAACA-TGGAGCGGCGATTGTTCACA-GAAAATGC 1095
> AT2G37620.1 | Symbols: ACT1, AAc1 | actin 1 | chr2:15779174-15781561
FORWARD LENGTH=1618
Length=1618
Score = 553 bits (299), Expect = 2e-156
Identities = 858/1121 (77%), Gaps = 66/1121 (6%)
Strand=Plus/Plus
Query 42 GACAACGGAACTGGAATGATCAAGGCGGGATTAGCTGGAGATGATGCACCAAAG-GCTAT 100
||||| |||||||||||| | ||||| || || ||||| ||||||||||| || ||| |
Sbjct 201 GACAATGGAACTGGAATGGTTAAGGCTGGTTTTGCTGGGGATGATGCACC-TAGAGCTGT 259
Query 101 GTTTCCAAGCATCATGGGTCGTCCAAGACACAAGAGG-GTGATGCTTGGAATGGATCAGA 159
|||||| || || |||||||||| | ||| | || |||||| |||| |||| || |
Sbjct 260 GTTTCCTAGTATTGTGGGTCGTCCTCGTCAC-ACCGGTGTGATGGTTGGGATGGGGCA-A 317
Query 160 AAGAAT-TTTATGTGGGAGACGAAGCTCAAGCCAAGA-GAGGTATTCTT-ACACTTAAAT 216
||| || |||||| || || ||||||||| |||| | |||||||| || || || || |
Sbjct 318 AAGGATGCTTATGTTGGCGATGAAGCTCAATCCAA-ACGAGGTATT-TTAACTCTCAAGT 375
Query 217 ACCCAATGGAGCATGGTATCGTTAACAATTGGGATGACATGGAGAAGATTTGGCATCATA 276
|||| || |||||||| || || ||||||||||||||||||||||||||||||||||| |
Sbjct 376 ACCCTATTGAGCATGGAATTGTCAACAATTGGGATGACATGGAGAAGATTTGGCATCACA 435
Query 277 CTTTCCACAACGAGCTACGTGTGGCTCCTCAAGAACACCCTGTGCTTCTCACTGACTCTC 336
||||| |||| ||||| ||||| |||||| | ||||| ||| | || || || || | |
Sbjct 436 CTTTCTACAATGAGCTCCGTGTTGCTCCTGAGGAACATCCTATTCTACTTACCGAGGCAC 495
Query 337 CTCTAAACCCTAAGGCCAATCGTGAGAAGATGGCTCAGATCATGTTTGAGACCTTCAATA 396
| || ||||| || || ||||||||||||||| |||| |||||||||||||| ||||||
Sbjct 496 CGCTTAACCCGAAAGCTAATCGTGAGAAGATGACTCAAATCATGTTTGAGACTTTCAATG 555
Query 397 CTCCTGCTACGTACGTGGCCGTTCAGGCCGTTCTCGCTCTCTATGCTAGTGGTCGTACCT 456
| ||||||| ||| ||||| ||||||| ||||| |||| ||||| ||||||||||| |
Sbjct 556 CCCCTGCTATGTATGTGGCTATTCAGGCTGTTCTTTCTCTTTATGCCAGTGGTCGTAC-T 614
Query 457 -CAGGTATTGTGTTAGATTCAGGAGATGGTGTGAGCCACA-TAGTTCCAATCTACCATGG 514
| ||||||||| | || || ||||||||||||||||||| | ||||| ||||| | ||
Sbjct 615 ACCGGTATTGTGCTCGACTCTGGAGATGGTGTGAGCCACACT-GTTCCTATCTATGAGGG 673
Query 515 TTACACACTCCCACATGCGATTATGCGTCTAGA-CTTAGCAGGCCGTGACCTAACCGACT 573
|| |||| |||||||| || | ||||| || ||| || || |||||||| || || |
Sbjct 674 GTATGCACTTCCACATGCTATCCTACGTCTTGATCTT-GCTGGTCGTGACCTCACGGA-T 731
Query 574 AC-CTCATGAATATTATGATGGAACGTGGCTACACATAT-ACCAC-ATCAGCGGAGCGGG 630
| || ||||| || | | || ||||| ||| | | | ||||| | |||| ||||| |
Sbjct 732 GCGCTGATGAAGATCCTAACCGAGCGTGGTTACTCTT-TCACCACCA-CAGCAGAGCGTG 789
Query 631 AGATCGTCCGAGACATCAAAG-AGAAA-TTATGTTATGTAGCTCTCGACTACGAGCAAGA 688
| || ||| ||||||| |||| |||| || || || | ||||| ||||||||||| ||
Sbjct 790 AAATTGTCAGAGACAT-AAAGGAGAAGCTT-TGCTACATTGCTCTTGACTACGAGCAGGA 847
Query 689 ACTGGAGA-ACGCTACAAC-A--T-A-C-----A-AA-ACCTACGAGCTTCCCGATGGTC 735
||| |||| | || | ||| | | | | | || | ||||||||| || ||||| |
Sbjct 848 ACTCGAGACA-GCCAAAACCAGCTCATCTGTTGAGAAGAACTACGAGCTACCTGATGGGC 906
Query 736 AAGTGATCAC-ACTAGG-TGCCGAGAGGAT-CAGGTGCCCTGAGGTTCTTTTCCAGCCGT 792
|||||||||| | | || | | ||| | || | | || ||||||||||||| |||||| |
Sbjct 907 AAGTGATCACCATT-GGAT-CAGAGCG-ATTCCGTTGTCCTGAGGTTCTTTACCAGCCAT 963
Query 793 CTTTGGTCGGGATGGA-ATCTTCTGGTATTCATGAGATGACTTACAAGTCGATTATGAAG 851
|| || | || ||||| | | ||||||| ||||| | || || || || || ||||||
Sbjct 964 CTATGATTGGTATGGAGAA-TGCTGGTATCCATGAAACCACCTATAACTCCATAATGAAG 1022
Query 852 TGTGATGTTGATATAAGGAAAGATTTGTATGGAAACATTGT-CATGAGTGGTGGCACAAC 910
|||||||| || || ||||| || ||||| || |||||||| | | |||||||| || ||
Sbjct 1023 TGTGATGTCGACATCAGGAAGGACTTGTACGGTAACATTGTGC-TCAGTGGTGGAACCAC 1081
Query 911 GATGTTCCCTGGGATCGC-G-CAGAGGATGTGCAAAGAGATCAGTGCGCTTG-CACCA-G 966
||||||||||| ||||| | |||| ||| |||||||||||| ||| ||| | ||| |
Sbjct 1082 AATGTTCCCTGGAATCGCCGACAGA--ATGAGCAAAGAGATCACTGCT-TTGGCTCCAAG 1138
Query 967 CTAATATGAAGATTAAAGTTGT-GATTCCTCCGGGGAG-AAAGTA-TA-GTGCTTGGATT 1022
| | |||||||| ||||| || | ||||| | ||| ||| || | || || |||||
Sbjct 1139 C-AGCATGAAGATCAAAGTCGTTGCC-CCTCCAGAGAGGAAA-TACTCTGT-CT-GGATT 1193
Query 1023 GGAGGCTCCATTTTGGCTTCTCTAAGTTCCTTTGAACAAAAGTGGATAACTAAGGCTGAG 1082
||||| ||||| ||||| || || ||| |||| | || | |||||| | ||||| |||
Sbjct 1194 GGAGGGTCCATCTTGGCCTCCCTCAGTACCTTCCAGCAGATGTGGATCGCAAAGGCAGAG 1253
Query 1083 TATGAAGAAACTGGAGCGGCGATTGTTCACAAGAAATGCTT 1123
||||| || | || | |||||||||||| ||| |||||
Sbjct 1254 TATGACGAGTCAGGTCCATCGATTGTTCACAGGAAGTGCTT 1294
> AT5G59370.1 | Symbols: ACT4 | actin 4 | chr5:23949739-23951837
FORWARD LENGTH=1544
Length=1544
Score = 547 bits (296), Expect = 7e-155
Identities = 849/1114 (76%), Gaps = 46/1114 (4%)
Strand=Plus/Plus
Query 39 TGTGACAACGGAACTGGAATGATCAAGGCGGGATTAGCTGGAGATGATGCACCAAAG-GC 97
|||||||| |||||||||||| | ||||| ||||| || || || |||||||| ||| ||
Sbjct 193 TGTGACAATGGAACTGGAATGGTTAAGGCCGGATTCGCGGGTGACGATGCACC-AAGAGC 251
Query 98 TATGTTTCCAAGCATCATGGGTCGTCCAAGACACAAGAGG-GTGATGCTTGGAAT-GGAT 155
| ||||| ||||| | || ||||| | |||| | || |||||| | || || |||
Sbjct 252 GGTTTTTCCGAGCATTGTAGGCCGTCCTCGCCACACG-GGTGTGATGGTAGGGATGGGA- 309
Query 156 CAGAAAGAAT-TTTATGTGGGAGACGAAGCTCAAGCCAAGA-GAGGTATTCTT-ACACTT 212
|| |||| || |||||| |||||||| |||||| ||| | | |||| |||| || ||
Sbjct 310 CA-AAAGGATGCTTATGTTGGAGACGAGGCTCAA-TCAAAACGTGGTA-TCTTGACTCTG 366
Query 213 AAATACCCAATGGAGCATGGTATCGTTAACAATTGGGATGACATGGAGAAGATTTGGCAT 272
|| |||||||| |||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct 367 AAGTACCCAATTGAGCATGGAATTGTTAATAATTGGGATGACATGGAGAAGATTTGGCAT 426
Query 273 CATACTTTCCACAACGAGCTACGTGTGGCTCCTCAAGAACACCCTGTGCTTCTC-ACTGA 331
|| |||||| |||| ||||| ||||| || ||| ||||||| || || || || || ||
Sbjct 427 CACACTTTCTACAATGAGCTTCGTGTTGCCCCTGAAGAACATCCGGTTCT-CTTGACCGA 485
Query 332 CTCTCCTCTAAACCCTAAGGCCAATCGTGAGAAGATGGCTCAGATCATGTTTGAGACCTT 391
||||||| || || || || || |||||||||||| ||||||||||||||||||| ||
Sbjct 486 AGCTCCTCTCAATCCGAAAGCTAACCGTGAGAAGATGACTCAGATCATGTTTGAGACATT 545
Query 392 CAATACTCCTGCTACGTACGTGGCCGTTCAGGCCGTTCTCGCTCTCTATGCTAGTGGTCG 451
|||||||||||||| ||| || ||| |||| || |||||| | |||||||| ||||| ||
Sbjct 546 CAATACTCCTGCTATGTATGTTGCCATTCAAGCTGTTCTCTCACTCTATGCCAGTGGCCG 605
Query 452 TACCTCAGGTATTGTGTTAGATTCAGGAGATGGTGTGAGCCACATAGTTCCAATCTACCA 511
||| | |||||||| || || || ||||||||||||||||||| || ||||||||| |
Sbjct 606 TACAACTGGTATTGTTTTGGACTCTGGAGATGGTGTGAGCCACACGGTACCAATCTACGA 665
Query 512 TGGTTACACACTCCCACATGCGATTATGCGTCTAGACTTAGCAGGCCGTGACCTAACCGA 571
|||||| | |||||||| || || | ||||| ||| ||||||| |||||||| || ||
Sbjct 666 GGGTTACGCTCTCCCACACGCAATCCTACGTCTTGACCTAGCAGGTCGTGACCTCACGGA 725
Query 572 CTACCTCATGAATATTATGATGGAACGTGGCTACACATAT-ACCACATCAGCGGAGCGGG 630
| |||||||||| || | | || ||||| ||| | | | |||||| | || || || |
Sbjct 726 CCACCTCATGAAAATCCTCACAGAGCGTGGATACTCCT-TCACCACAACTGCTGAACGTG 784
Query 631 AGATCGTCCGAGACATCAAAGAGAAATTATGTTATGTAGCTCTCGACTACGAGCAAGAAC 690
| || || ||||||| |||||||| | | ||| | ||||| |||| ||||||||| |
Sbjct 785 AAATTGTTAGAGACATGAAAGAGAAGCTCTCTTACATTGCTCTAGACTTCGAGCAAGAGC 844
Query 691 TGGAGAACG-CTACAACA---TA--C-----A-AAAC-CTACGAGCTTCCCGATGGTCAA 737
| |||| | | | |||| | | | ||| || ||||||||| ||||| |||
Sbjct 845 TAGAGA-CTTCCAAAACAAGCTCGTCCGTTGAGAAAAGCTTCGAGCTTCCTGATGGACAA 903
Query 738 GTGATCAC-ACTAGGTGCCGAGAGGATCAGGTGCCCTGAGGTTCTTTTCCAGCCGTCTTT 796
||||| || | | || || |||||| || |||| || || ||||| ||||||||||| |
Sbjct 904 GTGATAACCATT-GGAGCAGAGAGGTTCCGGTGTCCGGAAGTTCTGTTCCAGCCGTCAAT 962
Query 797 GGTCGGGATGGAATCTTCTGGTATTCATGAGATGACTTACAAGTCGATTATGAAGTGTGA 856
| |||| |||||| | | || || ||||| | || || || || || ||||| |||||
Sbjct 963 GATCGGAATGGAAAATCCAGGAATCCATGAAACCACATATAACTCTATCATGAAATGTGA 1022
Query 857 TGTTGATATAAGGAAAGATTTGTATGGAAACATTGT-CATGAGTGGTGGCACAACGATGT 915
||| ||||| |||||||| |||||||| |||||||| | | |||||||| || || ||||
Sbjct 1023 TGTGGATATTAGGAAAGACTTGTATGGTAACATTGTGC-TAAGTGGTGGAACCACAATGT 1081
Query 916 TCCCTGGGATCGC-GCAGAGGATGTGCAAAGAGATCAGTGCGCTT-G-CACCA-GCTAAT 971
| ||||| | | | || ||| |||||||||| | | |||| | | ||| | || |
Sbjct 1082 TTGGAGGGATTGGTG-ATAGAATGAGCAAAGAGATTAC-G-GCTTTGGCTCCAAG-TAGT 1137
Query 972 ATGAAGATTAAAGTTGTGATTCCTCCGGGGAGAAAGTATAGTGCT-TGGATTGGAGGCTC 1030
||||||||||| || ||| ||| |||| ||| ||||| |||| | ||||| || |||||
Sbjct 1138 ATGAAGATTAAGGTCGTGGCTCCACCGGAGAGGAAGTACAGTG-TATGGATCGGTGGCTC 1196
Query 1031 CATTTTGGCTTCTCTAAGTTCCTTTGAA-CAAAAGTGGATAACTAAGGCTGAGTATGAAG 1089
|| |||||||| || || | ||| | || | |||||| | || || ||||| || |
Sbjct 1197 TATATTGGCTTCACTCAGCAC-TTTCCAGCAGATGTGGATTGCGAAAGCAGAGTACGATG 1255
Query 1090 AAACTGGAGCGGCGATTGTTCACAAGAAATGCTT 1123
|| ||||| | | || || || | |||||||||
Sbjct 1256 AATCTGGACCCTCAATAGTGCATAGGAAATGCTT 1289
> AT1G49240.1 | Symbols: ACT8 | actin 8 | chr1:18215872-18218313
FORWARD LENGTH=1707
Length=1707
Score = 536 bits (290), Expect = 2e-151
Identities = 864/1134 (76%), Gaps = 68/1134 (6%)
Strand=Plus/Plus
Query 30 CCTATCGTGTGTGACAACGGAACTGGAATGATCAAGGCGGGATTAGCTGGAGATGATGC- 88
||||| || |||||||| || ||||||||| | ||||| ||||| ||||||||||||||
Sbjct 232 CCTATTGTCTGTGACAATGGTACTGGAATGGTTAAGGCTGGATTCGCTGGAGATGATGCT 291
Query 89 ACCAAAGGCTATGTTT-CCAAGCATCATGGGTCGTCCAAGACA-CAAGAGGGTGATGCTT 146
||| | || | ||| || || | | ||||| || ||||| || | | || ||| ||
Sbjct 292 CCCAGA-GCGGT-TTTCCCCAGTGTTGTTGGTCGACCTAGACATCATG-GTGTCATGGTT 348
Query 147 GGAATGGATCAGAAAGAAT-TTTATGTGGGAGACGAAGCTCAAGCCAAGAGAGGTATTCT 205
|| ||| ||||||||| || ||||| || || ||||| ||| |||| |||||||| ||
Sbjct 349 GGGATGAATCAGAAAG-ATGCGTATGTTGGTGATGAAGCACAATCCAAAAGAGGTATCCT 407
Query 206 TACACTT-AAATACCCAATGGAGCATGGTATCGTTAACAATTGGGATGACATGGAGAAGA 264
||| || |||||||| || ||||||||| | |||| ||| |||||||||||||||||||
Sbjct 408 CACA-TTGAAATACCCTATTGAGCATGGTGTTGTTAGCAACTGGGATGACATGGAGAAGA 466
Query 265 TTTGGCATCATACTTTCCACAACGAGCTACGTGTGGCTCCTCAAGAACACCCTGTGCTTC 324
|||||||||| |||||| |||| ||||| ||| | |||||| |||| ||||| || || |
Sbjct 467 TTTGGCATCACACTTTCTACAATGAGCTCCGTATTGCTCCTGAAGAGCACCCGGTTCTAC 526
Query 325 TCACTGACTCTCCTCTAAACCCTAAGGCCAATC-GTGAGAAGATGGCTCAGATCATGTTT 383
| || || ||||||| ||||| || ||||| | | ||||||||| ||||||||||||||
Sbjct 527 TTACCGAGGCTCCTCTTAACCCAAAAGCCAA-CAGAGAGAAGATGACTCAGATCATGTTT 585
Query 384 GAGACCTTCAATACTCCTGCTACGTACGTGGCCGTTCAGGCCGTTCTCGCTCTCTATGCT 443
|||||||| ||| |||| |||| ||| || ||| |||| || ||||| | || || ||
Sbjct 586 GAGACCTTTAATTCTCCAGCTATGTATGTTGCCATTCAAGCTGTTCTATCACTTTACGCC 645
Query 444 AGTGGTCGTACCTCAGGTATTGTGTTAGATTCAGGAGATGGTGTGAGC-CACA-TAGTTC 501
||||||||||| | ||||||||||| || || || ||||||||| | |||| | || |
Sbjct 646 AGTGGTCGTACAACCGGTATTGTGTTGGACTCTGGTGATGGTGTGT-CTCACACT-GTGC 703
Query 502 CAATCTACCATGGTTACACACTCCCACATGCGATTATGCGTCTAGAC-TTAGCAGGCCGT 560
| |||||| | |||| | |||| |||||||| || | ||||| ||| || || || |||
Sbjct 704 CTATCTACGAGGGTTTCTCACTTCCACATGCTATCCTCCGTCTCGACCTT-GCTGGTCGT 762
Query 561 GACCTAACCGACTACCTCATGAATATTATGATGGA-ACGTGGCTACACATAT-ACCACAT 618
||||| || || ||||||||||| || | | || | | || |||| | | ||||||
Sbjct 763 GACCTTACTGATTACCTCATGAAGATCCTTACCGAGA-GAGGTTACATGT-TCACCACAA 820
Query 619 CAGCGGAGCGGGAGATCGTCCGAGACATCAAAGAGAAA-TTATG-TTATGTAGCTCTCGA 676
|||| || ||||| || || |||||||||| ||||| || | || ||| ||| ||||
Sbjct 821 CAGCAGAACGGGAAATTGTGAGAGACATCAAGGAGAAGCTT-TCCTT-TGTCGCTGTCGA 878
Query 677 CTACGAGCAAGA-ACTGGAGAACGCTACAAC-A--T-----A-C-AAAAC--CTACGAGC 723
|||||||||||| | |||||| | | | ||| | | | | |||| ||| ||
Sbjct 879 CTACGAGCAAGAGA-TGGAGACCTCGAAAACCAGCTCCTCCATCGAAAAGAACTATGAA- 936
Query 724 TT-CCCGATGGTCAAGTGATCAC-ACTAGGTGCCGAGAGGAT-CAGGTGCCCTGAGGTTC 780
|| ||||| || ||||||||||| | | ||||| ||||| || ||||||||| || || |
Sbjct 937 TTACCCGACGGACAAGTGATCACGA-TCGGTGCTGAGAG-ATTCAGGTGCCCAGAAGTCC 994
Query 781 TTTTCCAGCCGTC-TTTGGTCGGGATGGAATCTTCTGGTATTCATGAGATGACTTACAAG 839
|||||||||| || |||| | || |||||| || | || || || |||| ||||||||
Sbjct 995 TTTTCCAGCCATCATTTGTT-GGAATGGAAGCTGCAGGGATCCACGAGACAACTTACAAC 1053
Query 840 TCGATTATGAAGTGTGATGTTGATATAAGGAAAGAT-TTGTATGGAAACATTGT-CATGA 897
||||| |||||||||||||||||||| ||||| || || || || |||||||| | | |
Sbjct 1054 TCGATCATGAAGTGTGATGTTGATATCAGGAAGGACCTT-TACGGTAACATTGTGC-TCA 1111
Query 898 GTGGTGGCACAACGATGTTCCCTGGGATCGCGCAGAG-G-ATGTGCAAAGAGATCAGTGC 955
||||||| ||||| |||||| | || || || ||| | ||| |||||||||||| ||
Sbjct 1112 GTGGTGGTACAACTATGTTCTCAGGTATTGC--AGACCGTATGAGCAAAGAGATCACAGC 1169
Query 956 GCTTGCACC-AGCTAATATGAAGATTAAAGTTGTGATTCCTCCGGGGAGAAAGTATAGTG 1014
||||| || ||| | ||||||||||| || ||| || || | ||| ||||| ||||
Sbjct 1170 TCTTGCCCCGAGC-AGCATGAAGATTAAGGTCGTGGCACCACCCGAGAGGAAGTACAGTG 1228
Query 1015 -CTTGGATTGGAGGCTCCATT-TTGGCTTCTCTAAGTTCCTTTGAA-CAAAAGTGGATAA 1071
|| ||||||| || || || ||| |||| || || | ||| | || | ||||||
Sbjct 1229 TCT-GGATTGGTGGTTCTATCCTTG-CTTCCCTCAGCAC-TTTCCAGCAGATGTGGATCT 1285
Query 1072 CTAAGGCTGAGTATGAAGAAACTGGAGC-GGCGATTGTTCACAAGAAA-TGCTT 1123
||||||| |||||||| ||| | || | ||| ||||| |||| |||| |||||
Sbjct 1286 CTAAGGCAGAGTATGATGAAGCAGGTCCAGGC-ATTGTCCACA-GAAAATGCTT 1337
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 56425412580
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5