BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg935251
Length=2380
Score E
Sequences producing significant alignments: (Bits) Value
AT2G43490.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfami... 3975 0.0
AT3G59570.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfami... 765 0.0
> AT2G43490.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily
protein | chr2:18054411-18058751 REVERSE LENGTH=2852
Length=2852
Score = 3975 bits (2152), Expect = 0.0
Identities = 2308/2383 (97%), Gaps = 12/2383 (1%)
Strand=Plus/Plus
Query 2 GAGACGAGAAGAACaaaaaaaaaaaaaGGAAG-AAACTTTGCGTCGATGAAAAAATGGAG 60
|||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 15 GAGACGAGAAGAAC--AAAAAAAAAAAGGAAGAAAACTTTGCGTGGATGAAAAAATGGAG 72
Query 61 ATCGGAGAAGAAAATCCTCGATGACCATTGACATTCAGAAGAGTTGGGAAGTGAGGACTG 120
||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||
Sbjct 73 ATCGGAGAAGAAAATTCTCGATGACCATTGACCTTC---AGAGTTGGGAAGTGAGGACTG 129
Query 121 ATGTGTTCTGGTGGAGAAGGAAAACAATGGAGCTGTGGAAAAGCGGGTGTAGTGAGTTTG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130 ATGTGTTCTGGTGGAGAAGGAAAACAATGGAGCTGTGGAAAAGCGGGTGTAGTGAGTTTG 189
Query 181 CAGAAAGTTGGATCTTTGGTTCGAGATTTGAGCGAGCCTTGTCTTTCACAATCGCGGATA 240
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 190 CAGAAAGTTGGATCTTTGGTTCGAGATTTGAGCGAGCCTTGTCTTTCACAGTCACGGATA 249
Query 241 CAGGTTGTTATAACTATCGGCAAAATGCTTAAGCCAGAGAAGTGGCAAGCGTCTTTTGAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 250 CAGGTTGTTATAACTATCGGCAAAATGCTTAAGCCAGAGAAGTGGCAAGCGTCTTTTGAT 309
Query 301 AGCGATGGAAGAGTTTCTGGTTTCCAAAAGGCGCTTAAATTAATTATTTTGGGGGGAATC 360
||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 310 AGCGACGGAAGAGTTTCTGGTTTCCAGAAGGCGCTTAAATTAATTATTTTAGGGGGAATC 369
Query 361 GACCCGTCTATTAGAGCTGAAGTTTGGGAATTTCTCCTTGGTTGTTATGCGTTGGGCAGC 420
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 370 GACCCATCTATTAGAGCTGAAGTTTGGGAATTTCTCCTTGGTTGTTATGCGTTGAGCAGC 429
Query 421 ACCTCTGAGTACCGTAATCAACTCAGGGTAGCTCGAAGGAAGCGATATAATGATTTGCTC 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 430 ACCTCTGAGTACCGTAATCAACTCAGGGTAGCTCGAAGGAAGCGATACAATGATTTGCTC 489
Query 481 AAGCAATGTCAGACGATGCATTCAAGTGTGGGAACTGGTTCACTTGCCTATGTCGTGGGT 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 490 AAGCAATGCCAGACGATGCATTCAAGTGTGGGAACTGGTTCACTTGCCTATGTTGTGGGA 549
Query 541 TCTAAAGTTATGGATATGCGGAAATCTTATAGAGATGAGTCAGTAAAGGTTGCTACTACA 600
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 550 TCTAAAGTTATGGATATGCGGAAATCTTATAGAGATGAGGCAGTAAAGGTTGCTACTACA 609
Query 601 GATGAAAACAGAGAAGAAGCTTTTATAGATAATAATGATAATGCTAATACTGAAAATCAT 660
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 610 GATGAAAACAGAGAAGATGCTTTTATAGATAATAATGATAATGCTAATACTGAAAATCAT 669
Query 661 CACAGTGATTGGAGTAATAATGGTACTGATACATCTCATGTACACAGAAGGGGAAGTTCT 720
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 670 CACAGTGATTGGAGTAATAATGGTACTGATACATCTCATTTACACAGAAGGGGAAGTTCT 729
Query 721 AGTGAGTCAGTTGATTTAGTAAGTGGAAGAGAAAGTCCGGAGAGCGTAGTATACAACACT 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 AGTGAGTCAGTTGATTTAGTAAGTGGAAGAGAAAGTCCGGAGAGCGTAGTATACAACACT 789
Query 781 TCCTCCTTTGTATCTGCCTCTAGTCCATATGGCTTTGCTTCCCCTGACGGTTATTTCGAC 840
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 790 TCCTCCTTTGTATCTGCCTCTAGTCCTTATGGCTATGCTTCCCCTGACGGTTATTTCGAC 849
Query 841 TTTCCCTCGCTACCGGTTACAGATTTGTTTGGGAGGAATAGTTTAGATAAGATTGAGGTT 900
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 850 TTTCCCTCGCTACCGGTTACAGATTTGTTTGGGAGAAATAGTTTAGATAAGATTGAGGTT 909
Query 901 TCTACGCCAGACGAGGATGCTTCATTGAAAAGTGAATTAAGATCTGAGGATGAGGCAATG 960
||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 910 TCTACGCCAGATGAGGATGCTTCACTGAAAAGTGAATTAAGATCTGAGGATGAGGGAATG 969
Query 961 CACAATTTTCGAATTGATAAGAATGCTGATTTAGTTAGAGAACAACGCAGGTCCACTCCA 1020
||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 970 CACAATTTTCGAATTGATAAGAATGCTGATTTAATTAGAGAACAACGTAGGTCCACTCCA 1029
Query 1021 GAGATCGAATTGATGCA-TCAGGGTTCTGTTGGACCATCGTCTTATACTGGTCGCAATGC 1079
|||||| || ||||||| || || ||||||||||||||||||||||||||||||||||||
Sbjct 1030 GAGATCAAAGTGATGCATTC-GGATTCTGTTGGACCATCGTCTTATACTGGTCGCAATGC 1088
Query 1080 AGAAATAGTTAATGGTTTGACAATATCAGATGTCCCTGAAATGGCATCAGTGAAGGAGAC 1139
|||||||||| ||||| ||| |||||||||||||||||||||||||||||| ||||| ||
Sbjct 1089 AGAAATAGTTGATGGTCTGAGAATATCAGATGTCCCTGAAATGGCATCAGTAAAGGACAC 1148
Query 1140 TCCCTCTCGTGTTGGGAATGTCACGGAAGATCGAGTGTCTGAATGGCTTTGGACTTTGCA 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1149 TCCCTCTCGTGTTGGGAATGTCACGGAAGATCGAGTGTCTGAATGGCTTTGGACTTTGCA 1208
Query 1200 TCGAATAGTTGTTGATGTGGTAAGGACGGATAGCCACCTTGAGTTTTATGAGGATCCAGG 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1209 TCGAATAGTTGTTGATGTGGTAAGGACGGATAGCCACCTTGAGTTTTATGAGGATCCAGG 1268
Query 1260 AAATCTAGGAAGAATGTCGGATATCCTTGCGGTTTATGCTTGGGTTGATCCTGCAACTGG 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269 AAATCTAGGAAGAATGTCGGATATCCTTGCGGTTTATGCTTGGGTTGATCCTGCAACTGG 1328
Query 1320 TTATTGTCAAGGAATGAGTGATTTAGTCTCTCCTTTCGTGGTTCTGTTTGAAGATAATGC 1379
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1329 TTATTGCCAAGGAATGAGTGATTTAGTCTCTCCTTTCGTGGTTCTATTTGAAGATAATGC 1388
Query 1380 TGATGCCTTTTGGTGCTTTGAAATGCTCATAAGAAGAACGCGTGCGAATTTCCAAATGGA 1439
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1389 TGATGCCTTCTGGTGCTTTGAAATGCTCATAAGAAGAACGCGTGCGAATTTCCAAATGGA 1448
Query 1440 GGGACCAACTGGGGTGATGGATCAATTGCAATCACTGTGGCACATATTGCAGATTACAGA 1499
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1449 GGGACCAACTGGGGTGATGGATCAATTGCAATCATTGTGGCACATATTGCAGATTACAGA 1508
Query 1500 TAAAGATATCTTTTCCCACTTATCGCGTATTGGAGCTGAAAGTCTTCATTTTGCCTTCCG 1559
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1509 TAAAGATATATTTTCCCACTTATCGCGTATTGGGGCTGAAAGTCTTCATTTTGCCTTCCG 1568
Query 1560 GATGCTCTTAGTTCTGTTCCGACGGGAATTGTCTTTTAACGAAGCTCTCAGGATGTGGGA 1619
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1569 GATGCTTTTAGTTCTGTTCCGACGGGAATTGTCTTTTAACGAAGCTCTCAGGATGTGGGA 1628
Query 1620 GATGATGTGGGCAGCTGATTATGATGAATCTGTTGCTGAAACTTTGGAGAATGATTGCTT 1679
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1629 GATGATGTGGGCAGCTGATTATGATGAATCTGTTACTGAAACTTTGGAGAATGATTGCTT 1688
Query 1680 GGAGCCTTTGGTGATTCAGCTTCCAAGAAAATCTGAACCTGAGGTGAGTGAAG-AATCGA 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 1689 GGAGCCTTTGGTGATTCAGCTTCCAAGAAAATCTGAACCTGAGGTGAGTGAAGAAAT-GA 1747
Query 1739 TAGAGGATGGAATTGGTAATAGTACAAAGAGGGAACCTACGATATCAAAGAGTGGGCCAA 1798
||||||||||||||||||||||||||||||||||||| | ||| |||||||| |||||||
Sbjct 1748 TAGAGGATGGAATTGGTAATAGTACAAAGAGGGAACCAATGATTTCAAAGAGCGGGCCAA 1807
Query 1799 TTTCAAAGAGTAGTGGTTTGCTGTCGAGGAGCGGTTTGCTGCCGAAGAGTGGTCCGTTGC 1858
|||||||||| || |||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct 1808 TTTCAAAGAGCAGCGGTTTGTTGTCAAGGAGCGGTTTGCTGCCGAAGAGTGGTCCGTTGC 1867
Query 1859 CAAAGACTGCTGGG-CCTTTCTCTGATGAGAGTGAGATAAAGGCAGCATCATCCTCATAT 1917
|||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct 1868 CAAAGACTGC-GGGTCCTTTCTCTGATGAGAGTGAGATAAAGTCAGCATCATCCTCGTAT 1926
Query 1918 CATTTTTGTGGGTTGACAAGAAGTCTTTGGTCAAGGAATGATAGAACAACACATGTCCCT 1977
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1927 CACTTTTGTGGGTTGACAAGAAGTCTTTGGTCAAGGAATGATAGAACAACACATGTCCCT 1986
Query 1978 TGTGTAGTTTCATCCATTAAAAAAGGGGATGATGCTCTTCCTGTCTTTTGTGTGGCGGCG 2037
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1987 TGTGTCGTTTCATCCATAAAAAAAGGGGATGATGCTCTTCCTGTCTTTTGTGTGGCGGCG 2046
Query 2038 ATTTTAATCATGAATCGACATAAGATCATGAAAGAAACTCGCTCGATCGATGACATGATA 2097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2047 ATTTTAATCATGAATCGACATAAGATCATGAAAGAAACTCGCTCGATCGATGACATGATA 2106
Query 2098 CAGATCTTCAATGATAAGGTTCTTGTATTCCGCGTGAGAAGATGCATACGCACAGCCATG 2157
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2107 CAGATCTTCAATGATAAGGTTCTTGTATTCCGCGTGAGAAGATGCATACGTACAGCCATG 2166
Query 2158 AAACTTCGTAGGAAATACATGTACAAGAGTCAGGTAATCAAGACCAAGAGCCACACTCAG 2217
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 2167 AAACTTCGTAGGAAATACATGTACAAGAGTCAGGTAATCAAGACTAAGAGTCACACTCAG 2226
Query 2218 TCTCAGAATCTCAACCAGGTTCAAATCCAGCATCAAACCCATATGGAGAGCCAGAGACCG 2277
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 2227 TCTCAGAATCTCAACCAGGTTCATATCCAGCATCAAACCCATATGGAGAGCCAGAGGCCG 2286
Query 2278 GAGGAGATTCAGAGTCATGGTGAGAACCAGAGCCAAACACCAAGTTTACATCATAGTCCT 2337
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2287 GAGGAGATTCAGAGCCATGGTGAGAACCAGAGCCAAACACCAAGTTTTCATCATAGTCCT 2346
Query 2338 GCCACTCAGAATGGTGACTAGGCAGAATTCCACCTATAACAGT 2380
||||||||||||||||||||||| | |||||||||||||||||
Sbjct 2347 GCCACTCAGAATGGTGACTAGGCGGGATTCCACCTATAACAGT 2389
> AT3G59570.1 | Symbols: | Ypt/Rab-GAP domain of gyp1p superfamily
protein | chr3:22000832-22006056 REVERSE LENGTH=2631
Length=2631
Score = 765 bits (414), Expect = 0.0
Identities = 678/802 (85%), Gaps = 32/802 (4%)
Strand=Plus/Plus
Query 1079 CAGAAATAGTTAATGGTTTGACAATATCAGATGTCCCTGAAATGGCATCAGTG-AA-GGA 1136
|||| || ||| ||||||||| |||||||||||||||||||| | | || | | || |||
Sbjct 1241 CAGAGATTGTTGATGGTTTGAGAATATCAGATGTCCCTGAAACGCCGTC-G-GCAAGGGA 1298
Query 1137 GACTCCCT-CTCGTGTTGGGAATGTCACGGAAGATCGAGTGTCTGAATGGCTTTGGACTT 1195
|||| | | |||||| ||||| ||| | |||||||||||| ||||||||||||||||| |
Sbjct 1299 GACT-CATACTCGTGGTGGGACTGTAAAGGAAGATCGAGTCTCTGAATGGCTTTGGACAT 1357
Query 1196 TGCATCGAATAGTTGTTGATGTGGTAAGGACGGATAGCCACCTTGAGTTTTATGAGGATC 1255
|||| || ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1358 TGCACCGGATAGTTGTTGACGTGGTAAGGACAGATAGCCACCTTGAGTTCTATGAGGATC 1417
Query 1256 CAGGAAATCTAGGAAGAATGTCGGATATCCTTGCGGTTTATGCTTGGGTTGATCCTGCAA 1315
||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 1418 CAGGAAATCTAGGTAGAATGTCAGATATCCTTGCGGTCTATGCTTGGGTTGATCCTGCAA 1477
Query 1316 CTGGTTATTGTCAAGGAATGAGTGATTTAGTCTCTCC-TTTCGTGGTTCTGTTTGAAGAT 1374
|||||||||| ||||||||||| |||||||| ||||| ||| || |||| |||||||||
Sbjct 1478 CTGGTTATTGCCAAGGAATGAGCGATTTAGTGTCTCCATTT-GTATTTCTTTTTGAAGAT 1536
Query 1375 AATGCTGATGCCTTTTGGTGCTTTGAAATGCTCATAAGAAGAACGCGTGCGAATTTCCAA 1434
|||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1537 AATGCTGACGCCTTTTGGTGCTTTGAAATGCTCATAAGAAGAACGCGTGCTAATTTCCAG 1596
Query 1435 ATGGAGGGACCAACTGGGGTGATGGATCAATTGCAATCACTGTGGCACATATTGCAGATT 1494
||||||||||||||||| || |||||||||||||||||||| |||| |||||||| | |
Sbjct 1597 ATGGAGGGACCAACTGGAGTAATGGATCAATTGCAATCACTATGGCGTATATTGCA-ACT 1655
Query 1495 -ACAGATAAAGATATCTTTTCCCACTTATCGCGTATTGGAGCTGAAAGTCTTCATTTTGC 1553
||||||||||| || ||||| ||| |||| |||||||| |||||||| ||||| |||||
Sbjct 1656 CACAGATAAAGAAATGTTTTCACACCTATCACGTATTGGTGCTGAAAGCCTTCACTTTGC 1715
Query 1554 CTTCCGGATGCTCTTAGT-TCTGTTCCGACGGGAATTGTCTTTTAACGAAG-CTCTCAGG 1611
||||||||||| ||||| | |||| ||||| || |||||||||||| ||| |||| |||
Sbjct 1716 GTTCCGGATGCTGTTAGTGT-TGTTTCGACGAGAGTTGTCTTTTAAC-AAGGCTCTGAGG 1773
Query 1612 ATGTGGGAGATGATGTGGGCAGCTGATTATGATGAATCTGTTGCTGAAACTTTGGAGAAT 1671
|||||||||||||||||||| ||||||| |||||| ||| ||||||||||||| |||||
Sbjct 1774 ATGTGGGAGATGATGTGGGCTGCTGATTTTGATGAGTCTTTTGCTGAAACTTTAGAGAAG 1833
Query 1672 GATTGCTTGGAGCCTTTGGT-GATTCAGCTTCCAAGAAA-ATCTGAACCTGAGGTGAGTG 1729
||||||||| |||| ||||| | |||||||||||| || ||||| | ||| || | |
Sbjct 1834 GATTGCTTGAAGCCGTTGGTTG-TTCAGCTTCCAA-AACGATCTGGAGTTGATATGGGGG 1891
Query 1730 AAGAATCGA-TAGAGGATGGAATTGGTA-ATAGTACAAAGAGGGAACCTACGATATCAAA 1787
| | | | |||| ||||||| ||| | | | |||||| || ||| | || | |||||
Sbjct 1892 ACCA-TAAAATAGATGATGGAAATGGCACA-ACTACAAATAGTGAATCAAC--T-TCAAA 1946
Query 1788 GAGTGGGCCA-ATTTCAAAGAGTAGTGGTTTGCTGTCGAGGAGCGGTTTGCTGCC-GAAG 1845
||| | || | ||||||||| ||| | | |||| | ||||||| | ||||| |||
Sbjct 1947 GAGCGA-CCGGACTTCAAAGAGCAGTC-TGT--TGTCCAAGAGCGGTCTACTGCCAGAA- 2001
Query 1846 AGTGGTCCGTTGCCAAAGACTG 1867
|||||||| |||||||| ||||
Sbjct 2002 AGTGGTCCATTGCCAAAAACTG 2023
Score = 638 bits (345), Expect = 0.0
Identities = 735/913 (81%), Gaps = 67/913 (7%)
Strand=Plus/Plus
Query 117 ACTGATGTGTTCTGGTGGAGAAGGAAA-ACAATGGAGCT-GT-GGAAAAGCGGGTGTAGT 173
|||||||| ||||| |||||| ||||| | |||||| || || || ||||| ||| | ||
Sbjct 267 ACTGATGTTTTCTGCTGGAGAGGGAAAGA-AATGGA-CTCGTCGG-AAAGCTGGTCTTGT 323
Query 174 GAGTTTGCAGAAAGTTGG-ATCTTTGGTTCGAGATTTGAGCGAGCCTTGTCTTTCACAAT 232
||| | || |||| ||| |||||||||||| ||| |||| |||||||||||||||||||
Sbjct 324 AAGTCTACAAAAAG-TGGCATCTTTGGTTCGGGATCTGAGAGAGCCTTGTCTTTCACAAT 382
Query 233 CGCGGATACAGGTTGTTATAACTATCGGCAAAATGCTTAAGCCAGAGAAGTGGCAAGCGT 292
| || ||||| |||||| | ||||| ||||||||||||||||| ||||||||||| || |
Sbjct 383 CTCGCATACAAGTTGTTTTGACTATTGGCAAAATGCTTAAGCCTGAGAAGTGGCAGGC-T 441
Query 293 CTT-TT-GATAGCGATGG-AAGAGTTTCTGGTTTCCAAAAGGCGCTTAAATTAATTATTT 349
|| || ||| ||||||| ||| ||||| ||||||| |||||||| |||||||||||||
Sbjct 442 -TTATTCGATGGCGATGGAAAG-GTTTCCAGTTTCCACAAGGCGCTCAAATTAATTATTT 499
Query 350 TGGGGGGAATCGACCCGTCTATTAGAGCTGAAGTTTGGGAATTTCTCCTTGGTTGTTATG 409
||||||||||||| || || || ||||||||||||||||||||||||||||| |||||||
Sbjct 500 TGGGGGGAATCGATCCATCCATAAGAGCTGAAGTTTGGGAATTTCTCCTTGGCTGTTATG 559
Query 410 CGTTGGGCAGCACCTCTGAGTACCGTAATCAACTCAGGGTAGCTCGAAG-GAAGCGATAT 468
| || |||||||||||||||| |||| |||||||||||||||||||| ||| |||||
Sbjct 560 CATTAAGCAGCACCTCTGAGTATCGTACGCAACTCAGGGTAGCTCGAAGAGAA-CGATAC 618
Query 469 AATGATTTGCTCAAGCAATGTCAGACGATGCATTCAAGTGTGGGAACTGGTTCACTTGCC 528
||||| ||||||||||||| |||| ||||||||| | ||||||||||||||||||||||
Sbjct 619 AATGAGCTGCTCAAGCAATGCCAGATGATGCATTCGACTGTGGGAACTGGTTCACTTGCC 678
Query 529 TATGTCGTGGGTTCTAAAGTTATGGATATGCGGAAATCTTATAGAGATGAG-TCAGTAAA 587
||||| || || |||||||||||||||||||| ||||| || | | ||||| | ||||||
Sbjct 679 TATGTTGTCGGATCTAAAGTTATGGATATGCGAAAATCATACAAAAATGAGGT-AGTAAA 737
Query 588 GGTTGCTACTACAGATGAAAACAGAGAAGAAGCTT-TTATAGATAATAATGATAATGCTA 646
|| | || || ||||||| | | | ||||||| || ||||| |||| || | |
Sbjct 738 GGAGGATA-TA--GATGAAAGCCG-G--GAAGCTTGTT-TAGATGGGCATGAGAA--C-A 787
Query 647 ATACTGAAAATCATCACAGTGATTGGAGTAATAATGGTACTGATACATCTCATGTACACA 706
|||| ||||| | |||||||||||||||||| |||||| | ||||| ||| | ||
Sbjct 788 ---CTGACAATCA-CG--GTGATTGGAGTAATAATGATACTGAAAAATCTCCTGTGCGCA 841
Query 707 GAAGGGGAAGTTCTAGTGAGTCAGTTGATTTAGTAAGTGGAAGAGAAAGTC-CGGAGAGC 765
|||| ||||| || |||||||||||||| |||| ||| || | | | | | |
Sbjct 842 GAAGTGGAAGCTCCAGTGAGTCAGTTGACCTAGTCAGTCCT-GATA--G-CAC--A-A-- 892
Query 766 GTAGTATACAACACTTCCTCCTTTGTATCTGCC-TCTAGTCCATATGGCTTTGCTTCCCC 824
|| ||| || ||||| || |||||| | || || ||||||||||||||| |||||||
Sbjct 893 -TA-TATG-AA-ACTTCTTCTTTTGTACCC-CCGTCCAGTCCATATGGCTTTCCTTCCCC 947
Query 825 TGA-C-----G--G-T--TAT-TTCGACTTTCCCTCGCTACCGGTTACAGATTTGTTTGG 872
|| | | | | ||| || ||||||||||| |||||||| ||||||||||||||
Sbjct 948 TGGTCCATTTGCAGATGATATCTTTGACTTTCCCTCTCTACCGGTCACAGATTTGTTTGG 1007
Query 873 GAGGAATAGTTTAGATAAGATTG-AGGTTTCTACGCCAGACGAGGATGCTTCATTGAAAA 931
||||| |||||||| |||| | | ||||||| ||||| || || ||||| | |||
Sbjct 1008 GAGGAGTAGTTTAGGCAAGAAAGGAC-TTTCTACTCCAGATGAAGAAACTTCAACGCAAA 1066
Query 932 GTGAATTAAGATCTGAGGATGAG-GCAATGCACAATTTTCGAATTGATAAGAATGCTGAT 990
|||| |||||||| ||||||||| | |||||||| |||||||||||| |||||||| |||
Sbjct 1067 GTGATTTAAGATCGGAGGATGAGAG-AATGCACAGTTTTCGAATTGACAAGAATGCAGAT 1125
Query 991 TTAGTTAGAGAAC 1003
||||||| |||||
Sbjct 1126 TTAGTTATAGAAC 1138
Score = 307 bits (166), Expect = 3e-82
Identities = 291/350 (83%), Gaps = 14/350 (4%)
Strand=Plus/Plus
Query 1983 AGTTTCATCCAT-TAAAAAAGGGGATGATGCTCTTCCTGTCTTTTGTGTGGCGGCGATTT 2041
|||||||||| | | ||||| ||||| ||||||| ||||||||||||||||| |||
Sbjct 2058 AGTTTCATCC-TGTGGGAAAGGAGATGACCCTCTTCCAGTCTTTTGTGTGGCGGCTATTC 2116
Query 2042 TAATCATGAATCGACATAAGATCATGAAAGAAACTCGCTCGATCGATGACATGATACAGA 2101
||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 2117 TAATCATGAATCGGCATAAAATCATGAAAGAAACTCGCTCGATCGATGACATGATAAAGA 2176
Query 2102 TCT-TCAATGATAAGGTTCTTGTA-TTCCGCGTGAGAAGATGCATACGCACAGCCATGAA 2159
| | | ||||| ||| | |||| | || | |||||||||||||||||||||||||| ||
Sbjct 2177 TTTGT-AATGACAAGCTGCTTGCAATTA-GAGTGAGAAGATGCATACGCACAGCCATAAA 2234
Query 2160 ACTTCGTAGGAAATACATGTACAAGAGTCAGGTAATCAAGACCAAGAGCCACACTCAGTC 2219
|||||||| ||||||| ||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 2235 ACTTCGTAAGAAATACTTGTACAAGAATCAGGTAATCAAGATTGAGAGCCACATTCAGTC 2294
Query 2220 TCAGAATC-TCAACCAGGTTCAAATCCAGCATCAAACC-CATATGGAGAGCCAGAGACCG 2277
|||||||| | ||| | | | || ||| |||||||| | ||||||| ||| | ||
Sbjct 2295 TCAGAATCATAAAC-ACCATGAGATACAGAATCAAACCGCG-ATGGAGAACCAAATCCCA 2352
Query 2278 GAGGAGATT-CAGAGTCATGGTGAGAACCAG-AGCCAAACACCAAGTTTA 2325
|| |||||| || ||||||| ||||||| | ||||||| ||||||||||
Sbjct 2353 GAAGAGATTACA-AGTCATGATGAGAACT-GTAGCCAAAGACCAAGTTTA 2400
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118172082930
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5