BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg935334
Length=1445
Score E
Sequences producing significant alignments: (Bits) Value
AT2G44140.1 | Symbols: | Peptidase family C54 protein | chr2:1... 2326 0.0
AT3G59950.1 | Symbols: | Peptidase family C54 protein | chr3:2... 1162 0.0
> AT2G44140.1 | Symbols: | Peptidase family C54 protein | chr2:18253497-18258035
REVERSE LENGTH=3221
Length=3221
Score = 2326 bits (1259), Expect = 0.0
Identities = 1387/1449 (96%), Gaps = 7/1449 (0%)
Strand=Plus/Plus
Query 1 TTGGTGCTTCATGTCTAGGTAATGAAGGCTTTATGTGATAGATTTGTTCCTCAACAATGT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 188 TTGGTGCTTCATGTCTAGGTAATGAAGGCTTTATGTGATAGATTTGTTCCTCAACAATGT 247
Query 61 TCTTCATCAAGCAAGAGTGATACGCATGATAAATCCCCTGTAGTTTCAGATTCAGGACCT 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 248 TCTTCATCAAGCAAGAGTGATACGCATGATAAATCCCCTTTAGTTTCAGATTCTGGACCT 307
Query 121 AGTGATAATAAGTCCAAGTTTACCTTATGGTCAAACGTCTTTACGTCTTCTTCCTCAGTT 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 308 AGTGATAATAAGTCCAAGTTTACCTTATGGTCAAACGTGTTTACGTCTTCTTCCTCAGTT 367
Query 181 TCTCAACCGTATAGGGAGTCTTCAACTTCTGGGCATAAGAAAGTTTGCACCACTCGTAAT 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 368 TCTCAACCGTATAGGGAGTCTTCAACTTCTGGGCATAAGCAAGTTTGCACCACTCGTAAT 427
Query 241 GGTTGGACAGCATTTGTAAAAAGAGTCTCTATGGCTACTGGCGCAATTAGGAGATTCCAG 300
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 428 GGTTGGACAGCATTTGTAAAAAGAGTCTCTATGGCTAGTGGAGCAATTAGGAGATTCCAG 487
Query 301 GAGCGTGTTTTAGGGCCAAATAGGACTGGTCTGCCGAGCACAACAAGTGATGTATGGCTC 360
||||||||||||||||| |||||||| ||||| ||||||||||| ||||| |||||||||
Sbjct 488 GAGCGTGTTTTAGGGCCTAATAGGACCGGTCTTCCGAGCACAACTAGTGACGTATGGCTC 547
Query 361 TTGGGTGTCTGTTACAAAATATCCGAGGATGAGGCCTCGGGGGAAACCAATACTGGCTGT 420
||||||||||| || |||||||| | ||||||| ||| ||||||||| |||||||| |
Sbjct 548 TTGGGTGTCTGCTATAAAATATCTGCGGATGAGAACTCAGGGGAAACCGATACTGGCACT 607
Query 421 GTATTGGCTGCATTTCAACAAGATTTTTCATCTAAAATACTGATGACATACCGTAGAGGT 480
|||||||||||||| |||| |||||||||||| ||||||||||||||||| |||| ||||
Sbjct 608 GTATTGGCTGCATTGCAACTAGATTTTTCATCCAAAATACTGATGACATATCGTAAAGGT 667
Query 481 TTTGAACCCTTTAGAGACACAACATATACCAGCGATGTGAACTGGGGTTGCATGATTCGA 540
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 668 TTTGAACCCTTTAGAGACACAACTTATACCAGCGATGTGAACTGGGGTTGCATGATTCGA 727
Query 541 AGTAGCCAGATGCTTTTTGCTCAGGCGTTGCTTTTCCATAGGGTGGGGAGGTCTTGGACT 600
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 728 AGTAGCCAGATGCTTTTTGCTCAGGCGTTGCTTTTCCATAGGCTGGGGAGGGCTTGGACT 787
Query 601 AAGAAATCTGAGCTGCCTGAACAGGAATACTTAGAGACCTTGGAACCTTTTGGTGATTCC 660
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 788 AAGAAATCTGAGCTTCCTGAACAGGAATACTTAGAGACCTTGGAACCTTTTGGTGATTCC 847
Query 661 GAGTCTTCAGCTTTCTCCATCCACAATCTTATAATAGCTGGAGCGTCCTATGGTCTCGCT 720
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 848 GAGCCTTCAGCTTTCTCCATCCACAATCTTATAATAGCTGGAGCGTCCTATGGTCTCGCT 907
Query 721 GCTGGGTCATGGGTAGGGCCATATGCCATTTGTCGAGCGTGGGAATCATTAGCGTGCAAG 780
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||
Sbjct 908 GCTGGGTCATGGGTAGGACCGTATGCCATTTGTCGAGCGTGGGAGTCATTAGCGTGCAAG 967
Query 781 AAGAGAAAACAAACTGATTCTAAAAACCAGACGCTTCCTATGGCTGTTCATATTGTTTCT 840
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 968 AAGAGAAAACAAACTGATTCTAAAAACCAGACGCTTCCTATGGCTGTTCATATCGTTTCT 1027
Query 841 GGCAGCGAAGATGGAGAGAGAGGTGGGGCTCCAATTCTCTGTATAGAAGATGCCACCAAA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1028 GGCAGCGAAGATGGAGAGAGAGGTGGGGCTCCAATTCTCTGTATAGAAGATGCTACCAAA 1087
Query 901 TCTTGTCTAGAATTCTCAAAAGGACAGTCTGAGTGGACACCGATTCTCCTTTTGGTCCCA 960
||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct 1088 TCTTGTCTAGAATTCTCAAAAGGACAGTCTGAGTGGACACCGATTATCCTTTTGGTTCCA 1147
Query 961 CTGGTTCTCGGGCTTGACAGTGTGAATCCCAGGTACATTCCATCTCTCATAGCCACATTC 1020
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1148 CTGGTTCTTGGGCTTGACAGTGTGAATCCCAGGTACATTCCATCTCTCGTAGCCACATTC 1207
Query 1021 ACTTTTCCTCAGAGCGTAGGGATTTTGGGTGGCAAACCAGGTGCCTCAACTTACATAGTT 1080
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1208 ACTTTTCCTCAGAGCGTGGGGATTTTGGGTGGCAAACCAGGTGCCTCAACTTACATAGTT 1267
Query 1081 GGTGTTCAAGAAGACAAAGGTTTCTACCTTGATCCGCATGAAGTTCAACAGGTGGTCACA 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1268 GGTGTTCAAGAAGACAAAGGTTTCTACCTTGATCCGCATGAAGTTCAACAGGTGGTCACA 1327
Query 1141 GTCAACAAGGAAACACCAGATGTTGACACATCCTCCTATCATTGCAATGTCATTCGTTAT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1328 GTCAACAAGGAAACACCAGATGTTGACACATCCTCCTATCATTGCAATGTCCTTCGTTAT 1387
Query 1201 GTTCCTTTGGAATCACTCGACCCATCTCTAGCTCTCGGATTCTATTGCCGCGACAAAGAT 1260
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1388 GTTCCTTTGGAATCACTCGACCCATCTCTAGCTCTAGGATTCTATTGCCGCGACAAAGAT 1447
Query 1261 GATTTCGACGACTTCTGTCTCCGAGCATCAAAACTAGCCGAGGATTCAAACGGTGCTCCA 1320
||||||||||| |||||||||||||||| |||||||| ||||| |||||||||||||||
Sbjct 1448 GATTTCGACGATTTCTGTCTCCGAGCATTGAAACTAGCTGAGGAATCAAACGGTGCTCCA 1507
Query 1321 CTATTCACCA-TAACTCAAACCCACAGCA-CGATAAACCAAAACAACTACGGGTTTTCGG 1378
| ||||| | | ||||||||||||| || |||||||||||| ||||||||||||| |||
Sbjct 1508 TTGTTCAC-AGTGACTCAAACCCACA-CAGCGATAAACCAAAGCAACTACGGGTTTGCGG 1565
Query 1379 ATGATGACAGCGAGGATGAACGTGAAGATGACTGGCAAATGCTCTGATCATCATCATC-- 1436
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1566 ATGACGACAGCGAGGATGAACGTGAAGATGACTGGCAAATGCTCTGATCATGATCATCGT 1625
Query 1437 -AAACATTT 1444
||||||||
Sbjct 1626 CAAACATTT 1634
> AT3G59950.1 | Symbols: | Peptidase family C54 protein | chr3:22144280-22147691
REVERSE LENGTH=1905
Length=1905
Score = 1162 bits (629), Expect = 0.0
Identities = 1139/1380 (83%), Gaps = 56/1380 (4%)
Strand=Plus/Plus
Query 1 TTGGTGCTTCATGTCTAGGTAATGAAGGCTTTATGTGATAGATTTGTTCC-TCAACAATG 59
||||||||| ||| |||||||||||||||| ||||||||||||||||||| |||| ||||
Sbjct 263 TTGGTGCTTAATGACTAGGTAATGAAGGCTATATGTGATAGATTTGTTCCTTCAA-AATG 321
Query 60 TTCTTCATCAAGCA-AGAGTGATACGCATGATA-A--AT--CC--C--CTGTAGTTTCAG 109
|||||||||||||| | ||||| | || ||||| | || || | || |||||||||
Sbjct 322 TTCTTCATCAAGCACA-AGTGAAAAGCGTGATATATCATCCCCGACATCTCTAGTTTCAG 380
Query 110 ATTCAG-GACCTAGTGATAATAAGTCCAAGTTTACCTTATGGTCAAACGTCTTTACGTCT 168
|||| | | |||||||||| ||||| || || || ||||| || | || || | |||
Sbjct 381 ATTCCGCG-TCTAGTGATAACAAGTCAAACTTGACGTTATGCTCGGATGTGGTTGCCTCT 439
Query 169 TCTTCCTCAGTTTCTCAACCGTATAGGG-AGTCTTCAACTTCTGGGCATAAGAAAGTTTG 227
|| ||| |||||||||||| || ||||| || |||||||||| |||||||| ||||||
Sbjct 440 TCCTCCCCAGTTTCTCAACTGTGTAGGGAAG-CTTCAACTTCAGGGCATAACCCAGTTTG 498
Query 228 CACCACTCGTAATGGTTGGACAG-CATTTGTAAAAAGAGTC-TCTATGGCTA-CTGGCGC 284
|||||| | || | ||||||||| |||| |||||| || | |||||||||| | || ||
Sbjct 499 CACCACACATAGTAGTTGGACAGTTATTT-TAAAAACAG-CTTCTATGGCTAGC-GGGGC 555
Query 285 AATTAGGAGATTCCAGGAGCGTGTTTTAGGGCCAAATAGGACTGGT-CTGCCGAGCACAA 343
|||||||||||| || || ||||| |||||||| | |||||| ||| | || |||| |
Sbjct 556 AATTAGGAGATTTCAAGACCGTGTATTAGGGCCGAGTAGGACGGGTATTTCC-AGCAGTA 614
Query 344 CAAGTGATG-TATGGCTCTTGGGTGTCTGTTACAAAATATCCGAGGATGAGGCCTCGGGG 402
| ||||| | |||||||| ||||||||||||| ||||| || |||| ||| |||| |
Sbjct 615 CTAGTGA-GATATGGCTCCTGGGTGTCTGTTATAAAATCTCAGAGGGTGAATCCTCAGAA 673
Query 403 GAAACCA-ATACTGGCTGTGTATTGGCTGCATTTCA-ACAAGATTTTTCAT-CTAAAATA 459
| || || || ||||| |||||||||| ||| |||| |||||||||||||| || ||||
Sbjct 674 G-AAGCAGATGCTGGCCGTGTATTGGCCGCA-TTCAGACAAGATTTTTCATCCT-TAATA 730
Query 460 CTGATGACATACCGTAGAGGTTTTGAACCCT-TTAGAGACACAACATATACCAGCGATGT 518
||||||||||| ||||||||||||| | ||| || |||||||||| ||||| || |||||
Sbjct 731 CTGATGACATATCGTAGAGGTTTTG-AGCCTATTGGAGACACAACTTATACTAGTGATGT 789
Query 519 GAACTGGGGTTGCATGATTCGAAGTAGCCAGATGCTTTTTGCTCAGGCGTTGCT-TTTCC 577
||||||||||||||| ||||||| |||||||||| || || ||||||||||| ||| |
Sbjct 790 AAACTGGGGTTGCATGCTTCGAAGCGGCCAGATGCTCTTCGCACAGGCGTTGCTATTT-C 848
Query 578 ATAGGGTGGGGAGGTCTTGGACTAAGAA--A-TCTGAG-CTGCCTGAACAGGAATACTTA 633
| ||| |||| |||||||||| || || | || ||| | | | || || ||||||||
Sbjct 849 AAAGGCTGGGAAGGTCTTGGAGGAAAAAGGATTCCGAGCCCG-CGGATGAGAAATACTTA 907
Query 634 GAGACCTTGGAACCTTTTGGTGATTCCGAGTCTTCAGCTTTCTCCATCCACAATCTTATA 693
|||| ||| |||| |||||||||| | ||| ||||||| ||||| || ||||||||||||
Sbjct 908 GAGATCTTAGAACTTTTTGGTGATACTGAGGCTTCAGCATTCTCGATTCACAATCTTATA 967
Query 694 ATAGCTGGAGCGTCCTATGGTCTCGCTGCTGGGTCATGGGTAGGGCCATATGCCATTTGT 753
||||||||| || ||||| || |||||||||||||||||||| |||||||| |||||
Sbjct 968 CTAGCTGGAGAATCTTATGGCCTGGCTGCTGGGTCATGGGTAGGACCATATGCTGTTTGT 1027
Query 754 CGAGCGTGGGAATCATTAGCGT-GCAAGAAGAGAA-AACAAACTGATTCTAAAAACCAGA 811
||| | |||||||||||||| | | ||||| | || || |||||||| ||| || ||
Sbjct 1028 CGATCATGGGAATCATTAGC-TCGGAAGAACA-AAGAAGAAACTGATGATAAGCACAAGT 1085
Query 812 CG-CTTCCTATGGCTGTTCATATTGTTTCTGGCAGCGAAGATGGAGAGAGAGGTGGGGCT 870
|| |||| |||||||||||||| ||||||||||| ||||| |||||||||||||| |||
Sbjct 1086 CGTTTTCC-ATGGCTGTTCATATCGTTTCTGGCAGTGAAGACGGAGAGAGAGGTGGAGCT 1144
Query 871 CCAATTCTCTGTATAGAAGATGCCACCAAATCTTGTCTAGAATTCTCAAAAGGACAGTCT 930
|||||||||||||| ||||||| ||||||| ||||| | ||||| ||| ||||| | ||
Sbjct 1145 CCAATTCTCTGTATTGAAGATGTCACCAAAACTTGTTTGGAATTTTCAGAAGGAGAAACT 1204
Query 931 GAGTGGACACCGATTCTCCTTTTGGTCCCACTGGTTCTCGGGCTTGACAGTGTGAATCCC 990
|||||| | || ||||| || |||||||| |||||||||||||||||||| ||||| |||
Sbjct 1205 GAGTGGCCGCCAATTCTTCTCTTGGTCCCTCTGGTTCTCGGGCTTGACAGAGTGAACCCC 1264
Query 991 AGGTACATTCCATCTCTCATAGCCACATTCACTTTTCCTCAGAGCGTAGGGATTTTGGGT 1050
||||||||||||||||| |||||||| ||||| || ||||| ||| | || ||||||||
Sbjct 1265 AGGTACATTCCATCTCTGATAGCCACTTTCACGTTCCCTCAAAGCCTCGGCATTTTGGGC 1324
Query 1051 GGCAAACCAGGTGCCTCAACTTACATAGTTGGTGTTCAAGAAGACAAAGGTTTCTACCTT 1110
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1325 GGCAAACCAGGTGCATCAACTTACATAGTTGGAGTTCAAGAAGACAAAGGTTTCTACCTT 1384
Query 1111 GATCCGCATGAAGTTCAACAGGTGGTCACAGTCAACAAGGAAACACCA-GATGTTGACAC 1169
||||||||||| ||||||||||| || |||||||| || |||| | || |||||||||||
Sbjct 1385 GATCCGCATGATGTTCAACAGGTAGTGACAGTCAAGAAAGAAA-ATCAAGATGTTGACAC 1443
Query 1170 ATCCTCCTATCATTGCAATGTCATTCGTTATGTTCCT-TTGGAATCACTCGACCCATCTC 1228
||| || || ||||||||| | | ||||||||||| ||| | ||||||||||| || |
Sbjct 1444 ATCGTCTTACCATTGCAATACCCTCCGTTATGTTCCACTTG-AGTCACTCGACCCGTCAC 1502
Query 1229 TAGCTCTCGGATTCTATTGCC-GCGACAAAGATGATTTCGACGACTTCTGTCTCCGAGCA 1287
||||||||||||||||||||| || ||||||||||||| || || |||||| ||||||||
Sbjct 1503 TAGCTCTCGGATTCTATTGCCAGC-ACAAAGATGATTTTGATGATTTCTGTATCCGAGCA 1561
Query 1288 TCAAAACTAGCCG-AGGATTCAAACGGTGCTCCACTATTCACCATAACTCAAACCCACAG 1346
|||| ||||||| || | || || |||||||| || ||||| | |||||| | |||||
Sbjct 1562 ACAAAGCTAGCCGGAG-ACTCTAATGGTGCTCCTCTCTTCACTGTGACTCAATCTCACAG 1620
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 71234573355
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5