BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg935386
Length=1720
Score E
Sequences producing significant alignments: (Bits) Value
AT2G44490.1 | Symbols: PEN2, BGLU26 | Glycosyl hydrolase superf... 2802 0.0
> AT2G44490.1 | Symbols: PEN2, BGLU26 | Glycosyl hydrolase superfamily
protein | chr2:18364756-18367725 FORWARD LENGTH=2009
Length=2009
Score = 2802 bits (1517), Expect = 0.0
Identities = 1653/1720 (96%), Gaps = 4/1720 (0%)
Strand=Plus/Plus
Query 1 CAAGAGAAAAGCAACCAAAGATGGCACATCTTCAAAGAACCTTTCCTACTGAGATGTCAA 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 97 CAAGAGAAAAGCAACCAAAGATGGCACATCTTCAAAGAACATTTCCTACTGAGATGTCAA 156
Query 61 AGGGTAGAGCTAGCTTTCCAAAAGGCTTTCTCTTTGGAACTGCTTCTTCTTCTTACCAGT 120
| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 157 AAGGTAGAGCTAGCTTTCCAAAAGGCTTTCTCTTTGGAACTGCTTCATCTTCTTATCAGT 216
Query 121 ATGAAGGAGCAGTGAGTGAAGGTGCGAGAGGACAAAGCATGTGGGATCATTTCTCCAACA 180
| ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct 217 ACGAAGGAGCAGTGAATGAAGGTGCGAGAGGACAAAGCGTGTGGGATCATTTCTCCAACA 276
Query 181 GGTTTCCTCACAGAATCAGTGATTCTAGTGACGGAAATGTCGCCGTTGATTTCTTCCATC 240
|||||||||||||||||||||||||||| |||||||| || ||||||||||||| |||||
Sbjct 277 GGTTTCCTCACAGAATCAGTGATTCTAGCGACGGAAACGTTGCCGTTGATTTCTACCATC 336
Query 241 GTTACAAGGAAGATATCAAGAGAATGAAGGATATAAACATGGATTCGTTTAGGCTTTCCA 300
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 337 GTTACAAGGAAGATATTAAGAGAATGAAGGATATAAACATGGATTCGTTTCGGCTTTCCA 396
Query 301 TTGCTTGGCCACGAGTTCTACCTTATGGCAAAAGGGAGAGAGGAGTTAGTGAAGAAGGAA 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 397 TTGCTTGGCCACGAGTTCTACCTTATGGCAAAAGGGATAGAGGAGTTAGTGAAGAAGGAA 456
Query 361 TTAAGTTTTACAATGATGTTATTGATGAACTCTTAGCCAATGAAATCACTCCTCTTGTTA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 457 TTAAGTTTTACAATGATGTTATTGATGAACTCTTAGCCAATGAAATCACTCCTCTTGTTA 516
Query 421 CTATCTTTCATTGGGACATACCTCAGGATCTTGAAGATGAATATGGCGGTTTTCTAAGCG 480
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 517 CTATCTTTCATTGGGACATACCACAGGATCTTGAAGATGAATACGGCGGTTTTCTAAGCG 576
Query 481 AGCAGATCATAGATGACTTCAGAGACTATGCGAGTCTCTGCTTCGAGAGATTTGGGGACA 540
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 577 AGCAGATTATAGATGACTTCAGAGACTATGCGAGTCTCTGCTTCGAGAGATTTGGGGACA 636
Query 541 GAGTGAGTCTGTGGTGCACTATGAATGAGCCGTGGGTCTACAGTGTCGCGGGATATGACA 600
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 637 GAGTGAGTCTGTGGTGCACAATGAATGAGCCGTGGGTCTACAGTGTCGCGGGCTATGACA 696
Query 601 CAGGGAGGAAAGCGCCAGGACGGTGCTCGAAGTATGTTAATGGTGCTAGTATTGCTGGAA 660
|||| ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||
Sbjct 697 CAGGAAGGAAAGCGCCAGGACGGTGCTCCAAGTATGTTAATGGCGCTAGTGTTGCTGGAA 756
Query 661 TGTCCGGATACGAGGCATATATTGTGAGCCATAACATGCTTCTAGCGCACGCAGAAGCAG 720
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 757 TGTCGGGATACGAGGCATATATTGTGAGCCATAACATGCTTCTAGCGCACGCAGAAGCAG 816
Query 721 TGGAAGTGTTTAGAAAATGTGACCATATTAAAAATGGAAAAATTGGGATTGCGCATAATC 780
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 817 TGGAAGTGTTTAGAAAATGTGACCATATTAAAAACGGACAAATTGGGATTGCGCATAATC 876
Query 781 CACTTTGGTACGAGCCATATGATCCGAATGATCCAGAGGATGTAGAAGGATGTAATCGAG 840
||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||
Sbjct 877 CACTTTGGTACGAGCCATATGATCCGAGTGATCCAGATGATGTCGAAGGATGTAATCGAG 936
Query 841 CTATGGACTTCATGCTTGGTTGGCATCACCACCCGACTGCTTGTGGAGACTATCCAGAAA 900
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 937 CTATGGACTTCATGCTTGGTTGGCATCAGCATCCGACTGCTTGTGGAGACTATCCAGAAA 996
Query 901 CGATGAAGAAATCAATTGGAGATCGATTACCGAGTTTTACACCAGAACAATCCAAGAAAC 960
|||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 997 CGATGAAGAAATCAGTTGGAGATAGATTACCGAGTTTTACACCAGAACAATCTAAGAAAC 1056
Query 961 TGATAGGCTCTTGCGATTACGTTGGTATAAACTACTATAGCTCGCTTTTTGTAAAGAGTA 1020
| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1057 TTATAGGCTCTTGCGATTACGTTGGTATAAACTACTATAGCTCGCTTTTCGTGAAGAGTA 1116
Query 1021 TCAAAAACGTGGATCCTACGCAACCTACTTGGAGAACTGACCAAGGCGTAGATTGGATGA 1080
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1117 TCAAACACGTGGATCCTACGCAACCTACTTGGAGAACTGACCAAGGCGTTGATTGGATGA 1176
Query 1081 AAACCAACATAGATGGGAAACAAATAGCGAAACAAGGAGGATCAGAGTGGAGTTTCACAT 1140
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1177 AAACCAACATAGATGGGAAACAAATAGCAAAACAAGGAGGATCAGAGTGGAGTTTCACAT 1236
Query 1141 ATCCAACAGGACTCAGAAACATTTTGAAGTATGTGAAAAACACTTATGGCAATCCTCCGA 1200
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1237 ATCCAACAGGACTCAGAAACATTTTGAAGTATGTGAAAAAAACTTATGGCAATCCTCCCA 1296
Query 1201 TTCTGATAACCGAGAACGGGTATGGTGAAGTAGCGGAACAGAGTCAGAGTCTGTATATGT 1260
|||| ||||| || |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1297 TTCTCATAACTGAAAACGGGTATGGTGAAGTAGCGGAACAGAGTCAGAGTCTTTATATGT 1356
Query 1261 ATAATCCTTCAATCGACACAGAGAGATTGGAGTACATAGAAGGACATATCCATGCGATTC 1320
| ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||
Sbjct 1357 ACAATCCTTCAATCGACACAGAGAGATTGGAGTACATTGAAGGACATATCCACGCTATTC 1416
Query 1321 ATCAAGCCATCCATGAAGATGGAGTAAGAGTGGAAGGTTATTACGTATGGTCATTGCTAG 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1417 ATCAAGCCATCCATGAAGATGGAGTAAGAGTGGAAGGTTATTACGTATGGTCATTGCTAG 1476
Query 1381 ATAACTTCGAGTGGAACAGTGGATATGGAGTAAGATATGGTTTGTATTACATAGATTACA 1440
|||||||||||||||||||||||||||| || ||||||||||| |||||||| |||||||
Sbjct 1477 ATAACTTCGAGTGGAACAGTGGATATGGTGTGAGATATGGTTTATATTACATTGATTACA 1536
Query 1441 AAGATGGGCTTAGGCGATACCCGAAAATGTCGGCTTTATGGTTGAAAGAGTTCTTGAGGT 1500
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1537 AAGATGGGCTTAGACGATACCCGAAAATGTCGGCGTTATGGTTGAAAGAGTTCTTGAGGT 1596
Query 1501 TTGATCAAGAAT-C--TTCTTCGACGTCTAAGGAAGAAGAGAAGAAAGAGAGCTATGGAA 1557
||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1597 TTGATCAAGAAGACGATTCTTCGACGTCTAAGAAAGAAGAGAAGAAAGAGAGCTATGGAA 1656
Query 1558 AACAGCTATTGCATTCTGTTCAAGACAGTCAATTTGTTCATTCGATTAAAGACAGCGGTG 1617
||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 1657 AACAGTTATTGCATTCTGTTCAGGACAGTCAATTTGTTCATTCGATTAAAGACAGTGGTG 1716
Query 1618 CGTTACCCGCGGTTTTGGGGAGCTTGTTCGTTGTGTCTGCAACTGTTGGTACTTCTCTGT 1677
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1717 CGTTACCTGCGGTTTTGGGGAGCTTGTTCGTTGTGTCTGCAACTGTTGGTACTTCTCTGT 1776
Query 1678 TCTTCAAAGGAGCTAATAATTGAAAGAGA-GAAACAAAAT 1716
||||||||||||||||||||||||| ||| ||||||||||
Sbjct 1777 TCTTCAAAGGAGCTAATAATTGAAACAGAAGAAACAAAAT 1816
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85039723230
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5