BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg935388 Length=1025 Score E Sequences producing significant alignments: (Bits) Value AT2G44510.1 | Symbols: | CDK inhibitor P21 binding protein | c... 1616 0.0 AT5G03830.1 | Symbols: | CDK inhibitor P21 binding protein | c... 477 9e-134 > AT2G44510.1 | Symbols: | CDK inhibitor P21 binding protein | chr2:18377070-18379210 FORWARD LENGTH=1318 Length=1318 Score = 1616 bits (875), Expect = 0.0 Identities = 967/1011 (96%), Gaps = 7/1011 (1%) Strand=Plus/Plus Query 20 AGATGCCTCGAAGACCATCATCAGGAAGAAGAGTGTTAAAGTATCAGCCTTTAGCATTTT 79 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 156 AGATGCCTCGAAGACCATCATCAGGAAGAAGAGTGTTAAAGCATCAGCCTTTAACATTTT 215 Query 80 CACCGTTTATGCGGTTACTTTCCTTTGCTTCAATGGCTAGGCGTAATTTGCCTCATCCTG 139 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 216 CACCGTTTATGCGGTTACTTTCCTTTGCTTCAATGGCTAGGCGTGATTTGTCTCATCCTG 275 Query 140 AAGATTGTCAATGTTCTGATGAAGAGATATCTTTTGATGAAAAGGAAAAGATCCCTAATT 199 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct 276 AAGATTGTCAATGTTCTGATGAAGATATATCTTTTGATGAAAAGCAAAAGATCCCTAATT 335 Query 200 TATCTAAG-AAAGGGAAAGAACAACAATTATCGGACTCGTCTGATGAAGAAGATTCTCAG 258 || | ||| |||||||||||| ||||| | |||||||||||||||||||||||||||||| Sbjct 336 TA-CCAAGAAAAGGGAAAGAAGAACAAGTCTCGGACTCGTCTGATGAAGAAGATTCTCAG 394 Query 259 GAAGATGTCCAAGCAGACTTTGAGTTCTTTGATCCTAAACCTACAGACTTTCATGGAGTC 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 395 GAAGATGTCCAAGCAGACTTTGAGTTCTTTGATCCTAAACCTACAGACTTTCATGGTGTT 454 Query 319 AAGATCCTGTTACAAAACTATCTCGATGACAAGGAGTGGGATTTGAGCAGTTTTGTTGAT 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 455 AAGATCCTGTTACAAAACTATCTCGATGACAAGGAGTGGGATTTGAGCAGTTTTGTTGAT 514 Query 379 TTCATATTGGAGCAAACAACTGTAGGAACTGTTGTAAAAGTTGCAGATGATGAGGACGAG 438 | ||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||| Sbjct 515 TGCATATTGGAGCAAACAACTGTAGGAACTGTTGTGAAAGTAGCTGATGATGAGGATGAG 574 Query 439 TCAGTATTTGCTCTTGTCACTGCTCTTAACATGGCAAGATATAAGGACAACAAGTGCTTT 498 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct 575 TCAGTATTTGCTCTTGTCACTGCTCTTAACATGGCAAGAGATAAGGACAACAAGTGTTTT 634 Query 499 AGAGACTTAAAAGAGTTTCTTCGAAAAGTTTGTTCAGAAAAGAATATAGCGAATAATCTA 558 ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct 635 AGAGAGTTAAAAGAGTTTCTTCGTAAAGTTTGTTCTGAAAAGAATATAGCGAATAATCTA 694 Query 559 GAAATGCTCTTAGAGAAAAAGGCACAAGATGTTGGTTTATTGGTATCTCAAAGAGTGATG 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 695 GAAATGCTCTTAGAGAAAAAGGCACAAGATGTTGGTTTATTGGTATCTCAAAGAGTGATG 754 Query 619 AACCTTCCTCCACAACTTCTTCCTCCACTGTACGATGGATTGTTCGATGAAGTCTCATGG 678 || |||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 755 AATCTTCCTCCACAACTTCTTCCTCCACTTTATGATGGATTGTTCGATGAAGTCTCATGG 814 Query 679 GCCA-CTGAAGACGAGCCTACAGAAGAGCTTCGAAGATCATTCCGCTTCAAGTCATATCT 737 || | | ||||| |||||||||||| ||||||||||||||||||| || ||||||||||| Sbjct 815 GCAATC-GAAGATGAGCCTACAGAAAAGCTTCGAAGATCATTCCGTTTTAAGTCATATCT 873 Query 738 TCTAATTACCAAGATTTACAAGCTGAAGAATCCTAAGCAGAGAAAACCTCGACATGGTGA 797 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 874 TCTAGTTACCAAGATTTACAAGCTGAAGAATCCTAAGCAGAGAAAACCTCGACATGGTGA 933 Query 798 AGA---CATTGAAGAAACAATATTTCTTAAGCCTGAAGATGAACTCTTTCTCGAGCTTAG 854 ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 934 AGAAGACATTGAAGACACAGTATTTCTTAAGCCTGAAGATGAACTCTTTCTCGAGCTTAG 993 Query 855 TTCTTGGTCCTTCACATTCCCTATGCGCTCACAGCTCGTTACTTCCCAAGAAATGAAGAA 914 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 994 CTCTTGGTCCTTCACATTCCCTATGCGCTCACAGCTCGTTACTTCCCAAGAAATGAAGAA 1053 Query 915 TTATCAGTTGATGGGTTTAGTGATGGCCGTGGAAGCAAACAAGATTCCTAAATTCAGACA 974 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1054 TTATCAGCTGATGGGTTTAGTGATGGCCGTGGAAGCAAACAAGATTCCTAAATTCAGACA 1113 Query 975 GATGTTGAACTCTCTTATTGATGAACAATGATGAACATCTTCTTCTTAAAG 1025 ||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 1114 GATGTTGAACTCTCTCATTGATTAACAATGATGAACATCTTCTTCTTAAAG 1164 > AT5G03830.1 | Symbols: | CDK inhibitor P21 binding protein | chr5:1018338-1020460 FORWARD LENGTH=1282 Length=1282 Score = 477 bits (258), Expect = 9e-134 Identities = 354/400 (89%), Gaps = 7/400 (2%) Strand=Plus/Plus Query 364 AGCA-GTTTTGTTGATTTCATATTGGAGCAAACAACTG-TAGGAACTGTTGTAAAAGTTG 421 |||| ||||||| ||||| ||| || | |||||| | | |||||||||| |||||||| | Sbjct 333 AGCAGGTTTTGTGGATTTGATACTGAATCAAACAGC-GTTAGGAACTGTGGTAAAAGTAG 391 Query 422 CAGATGATGAGGACGAGTCAGTATTTGCTCTTGTCACTGCTCTTAACATGGCAAGATATA 481 ||||||||||||| ||| || ||||||||||| |||||||||||||| |||||||||| | Sbjct 392 CAGATGATGAGGATGAGGCATTATTTGCTCTTATCACTGCTCTTAACTTGGCAAGATACA 451 Query 482 AGGACAACAAGTGCTTTAGAGA-CTTAAAAGAGTTTCTTCGAAAAGTTTGTTCAGAAAAG 540 |||| || |||||||||||||| | ||||||||||||||| ||||||||||| || ||| Sbjct 452 AGGAGAATAAGTGCTTTAGAGAGC-TAAAAGAGTTTCTTCTTAAAGTTTGTTCGGAGAAG 510 Query 541 AATATAGCGAATAATCTAGAAATGCTCTTAGAGAAAAAGG-CACAAGATGTTGGTTTATT 599 ||| |||||| | |||||||| | |||||||||||||||| || |||||||||||||||| Sbjct 511 AATGTAGCGAGTGATCTAGAACTACTCTTAGAGAAAAAGGCCA-AAGATGTTGGTTTATT 569 Query 600 GGTATCTCAAAGAGTGATGAACCTTCCTCCACAACTTCTTCCTCCACTGTACGATGGATT 659 ||| ||||||||||||||||| ||||||| |||||| ||||||||||| || |||||||| Sbjct 570 GGTCTCTCAAAGAGTGATGAATCTTCCTCTACAACTCCTTCCTCCACTATATGATGGATT 629 Query 660 GTTCGATGAAGTCTCATGGGCCACTGAAGACGAGCCTACAGAAGAGCTTCGAAGATCATT 719 |||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 630 GTTCGACGAAGTCTCATGGGCCACTGAAGACGAGCCTACAGAAGAGCTTCGAGGGTCATT 689 Query 720 CCGCTTCAAGTCATATCTTCTAATTACCAAGATTTACAAG 759 |||||||||||||||| ||||||| | ||||| |||||| Sbjct 690 CCGCTTCAAGTCATATATTCTAATCGCTAAGATCTACAAG 729 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50234147000 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5