BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg935611
Length=2156
Score E
Sequences producing significant alignments: (Bits) Value
AT2G46430.1 | Symbols: ATCNGC3, CNGC3, CNGC3.C | cyclic nucleot... 3314 0.0
AT2G46440.1 | Symbols: ATCNGC11, CNGC11 | cyclic nucleotide-gat... 1293 0.0
AT4G01010.1 | Symbols: ATCNGC13, CNGC13 | cyclic nucleotide-gat... 436 3e-121
> AT2G46430.1 | Symbols: ATCNGC3, CNGC3, CNGC3.C | cyclic nucleotide
gated channel 3 | chr2:19058294-19061436 FORWARD LENGTH=2462
Length=2462
Score = 3314 bits (1794), Expect = 0.0
Identities = 2040/2158 (95%), Gaps = 20/2158 (1%)
Strand=Plus/Plus
Query 1 TGTGGAAGATAACAAGCAGATATGATGAATCCCCAAAGAAACAAATTCGTAAGGTTTAAT 60
||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 158 TGTGGAAGAAAACAATCAGCGATGATGAATCCCCAAAGAAACAAATTCGTAAGGTTTAAT 217
Query 61 GG--A-GATGATGAGTTTTCGACCAAAACTACTAGACCATCAGTAACTTCAGTTATGAAA 117
|| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 218 GGAAATGATGATGAGTTTTCGACCAAAACTACTAGACCATCAGTATCTTCAGTTATGAAA 277
Query 118 ACCGTTAGACGAAGCTTCGAAAAGGGGTCAGCGAAAATCAGAACCTTTAAGCAGCCCTTG 177
||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 278 ACCGTTAGACGAAGCTTCGAAAAGGGGTCAGAGAAAATCAGAACCTTTAAGCGGCCCTTA 337
Query 178 AGCTTTCATTCaaagaagaataaag--aa-aacaagaagaagaagaTACTAAGAGTGATG 234
||| |||||||||| |||||||||| || || |||||||||||||||||||||||||||
Sbjct 338 AGCGTTCATTCAAATAAGAATAAAGAAAATAATAAGAAGAAGAAGATACTAAGAGTGATG 397
Query 235 AATCCTAACGATTCTTATCTTCAAAACTGGAACAAGATTTTCTTGCTTCTCTCTGTTGTG 294
||||| |||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 398 AATCCGAACGATTCATATCTTCAAAGCTGGAACAAGATTTTCTTGCTTCTCTCTGTTGTG 457
Query 295 GCTTTAGCCTTTGATCCTCTGTTTTTCTATATCCCCGT-TGTGAACCCCGTGAGATTCTG 353
|||||||||||||||||||||||||||||||||||| | |||||| |||| | |||| ||
Sbjct 458 GCTTTAGCCTTTGATCCTCTGTTTTTCTATATCCCC-TATGTGAAGCCCGAGCGATTTTG 516
Query 354 TCTTAATCTAGATACGAAACTCGAGGCAACCGCTTGCATTTTCCGCACTTTCATCGACGC 413
|||||||||||| | ||||||| || ||| ||||||| ||||||||||||||||||||||
Sbjct 517 TCTTAATCTAGACAAGAAACTCCAGACAATCGCTTGCGTTTTCCGCACTTTCATCGACGC 576
Query 414 TTTCTACGTGGTTCACATGCTGTTTCAGTTTCATACCGGTTTCATCGCTCCTTCGTCTCG 473
|||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||| |
Sbjct 577 TTTCTATGTGGTTCACATGCTGTTTCAGTTTCATACCGGTTTCATCACTCCTTCTTCTAG 636
Query 474 TGGTTTCGGAAGAGGAGAGCTTAATCAGAATCCTAAAGAAATCGCTATGAGATACCTCAG 533
||||||||| ||||||||||||||| |||| | |||||| |||||| | ||||||||| |
Sbjct 637 TGGTTTCGGCAGAGGAGAGCTTAATGAGAAACATAAAGATATCGCTTTAAGATACCTCGG 696
Query 534 CTCATACTTTCTGGTTGATCTTCTTTCGATTCTCCCTATTCCACAGGTAGTTGTTCTAGC 593
|||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 697 CTCATACTTTCTAATCGATCTTCTTTCGATTCTCCCTATTCCTCAGGTAGTTGTTCTAGC 756
Query 594 TATTGTTCCGAGGATGAGAATACCCGCGTCGCTGGTAGCAAAAGAGCTATTGAAATGGGT 653
||||||||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||
Sbjct 757 TATTGTTCCAAGGATGAGACGACCCGCGTCGCTAGTAGCAAAAGAGCTACTGAAATGGGT 816
Query 654 AATATTTTGCCAATATGTTCCGAGGATAGCGCGAATCTATCCGCTTTTTAAAGAAGTAAC 713
||| ||||||||||||||||||||||||||| |||||||||||||||| || ||||||||
Sbjct 817 AATCTTTTGCCAATATGTTCCGAGGATAGCGAGAATCTATCCGCTTTTCAAGGAAGTAAC 876
Query 714 AAGAACTTCTGGTTTGGTAACTGAAACTGCTTGGGCTGGAGCTGCTTTAAACCTATTCCT 773
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 877 AAGAACTTCTGGTTTGGTAACTGAAACTGCTTGGGCTGGTGCTGCTTTAAACCTATTCCT 936
Query 774 CTACATGTTAGCTAGCCACGTTTTTGGGTCTTTTTGGTACTTGATTTCGATAGAAAGGAA 833
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 937 CTACATGTTAGCTAGCCATGTTTTTGGGTCTTTTTGGTACTTGATTTCGATAGAAAGGAA 996
Query 834 AGATAGATGTTGGCGCGAAGCGTGTGCTAAGATAGACGGA-TGC-CGTCATGAAAAAC-T 890
||||||||||||||| || ||||||||||||||| | | | ||| | ||||| | || |
Sbjct 997 AGATAGATGTTGGCGTGAGGCGTGTGCTAAGATACA-GAATTGCAC-TCATG-CATACTT 1053
Query 891 GTACTGTTCACCAACAGGGGAAGACAATAGG-CAGTTTTTAAAGGGTTCTTGTCCGTTGA 949
|||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||
Sbjct 1054 ATACTGTTCACCAACAGGGGAAGACAATAGGTTA-TTTTTAAACGGTTCTTGTCCGTTGA 1112
Query 950 TCGATCCCGAAGAAATCTCAAACTCGACGGTTTTCAACTTTGGTATATTCGCTGATGCAT 1009
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1113 TCGATCCCGAAGAAATCACAAACTCGACGGTTTTCAACTTTGGTATATTCGCTGATGCAT 1172
Query 1010 TGCAGTCTGGAGTTGTGGAGTCTAGAGATTTCCCTAAGAAGTTTTTCTACTGTTTCTGGT 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1173 TGCAGTCTGGAGTTGTGGAGTCTAGAGATTTCCCTAAGAAGTTTTTCTACTGTTTCTGGT 1232
Query 1070 GGGGTCTCCGCAATCTTAGTGCTTTGGGCCAAAACTTGAAGACGAGTGTCTTTGAAGGAG 1129
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1233 GGGGTCTCCGCAATCTTAGTGCTTTGGGCCAAAACTTGAAGACGAGTGCCTTTGAAGGAG 1292
Query 1130 AGATCATTTTTGCGATAGTCATATGTGTCTCTGGACTAGTCTTGTTTGCTCTTCTCATTG 1189
||||||||||||| |||||||| ||| | ||||||||||||||||||||||| |||||||
Sbjct 1293 AGATCATTTTTGCAATAGTCATTTGTATTTCTGGACTAGTCTTGTTTGCTCTCCTCATTG 1352
Query 1190 GAAATATGCAGAAATATTTGCAATCAACTACTGTAAGAGTTGAGGAAATGAGAGTGAAAA 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1353 GAAATATGCAGAAATATTTGCAATCAACTACTGTAAGAGTTGAGGAAATGAGAGTGAAAA 1412
Query 1250 GGAGAGATGCAGAGCAATGGATGTCTCATCGGATGTTGCCAGACGATCTGAGAAAACGTA 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1413 GGAGAGATGCAGAGCAATGGATGTCTCATCGGATGTTGCCAGACGATCTGAGAAAACGTA 1472
Query 1310 TCCGTAAATACGAACAGTATAAATGGCAAGAAACCAAAGGAGTTGAGGAAGAAGCTCTTC 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1473 TCCGTAAATACGAACAGTATAAATGGCAAGAAACCAAAGGAGTTGAGGAAGAAGCTCTTC 1532
Query 1370 TCTCTAGTCTTCCAAAAGATCTCAGAAAGGACATTAAACGCCATCTTTGTCTCAATTTGC 1429
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1533 TCTCTAGTCTTCCAAAAGATCTCAGAAAGGACATTAAACGCCATCTTTGTCTCAAGTTGC 1592
Query 1430 TCAAAAAGGTGCCTTGGTTTCAAGCTATGGATGATCGGTTACTAGACGCTTTATGTGCTC 1489
||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||
Sbjct 1593 TCAAAAAGGTGCCTTGGTTCCAAGCTATGGATGATCGGTTACTAGATGCTCTATGTGCTC 1652
Query 1490 GTCTCAAAACGGTTCTTTATACAGAGAACAGTTACATTGTGCGTGAAGGTGAACCAGTGG 1549
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1653 GTCTCAAAACGGTTCTTTATACAGAGAAGAGTTACATTGTGCGTGAAGGTGAACCAGTGG 1712
Query 1550 AGGATATGTTGTTTATCATGAGAGGAAATCTAATAAGCACCACGACTTATGGTGGCAAAA 1609
|||||||||||||||| |||||||||||| |||| |||||||| ||||||||||||| ||
Sbjct 1713 AGGATATGTTGTTTATAATGAGAGGAAATTTAATCAGCACCACTACTTATGGTGGCAGAA 1772
Query 1610 CTGGCTTCTTCAATTCGGTTCG-CTTAGTTGCTGGTGATTTTTGTGGAGATCTTCTCACT 1668
|||| ||||||||||| ||| | |||||||||||||||||| ||||||||||||||||||
Sbjct 1773 CTGGTTTCTTCAATTCTGTT-GACTTAGTTGCTGGTGATTTCTGTGGAGATCTTCTCACT 1831
Query 1669 TGGGCATTAGATCCTCTCAGTTCA-AACTTCCCTATCTCTAGTAGAACCGTTCAAGCTTT 1727
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1832 TGGGCATTAGATCCTCTCAGTTCCCAA-TTCCCTATCTCTAGTAGAACCGTTCAAGCTTT 1890
Query 1728 GACAGAAGTCGAAGGCTTTGTTCTCTCAGCTGATGATCTCAAGTTTGTTGCTACTCAGTA 1787
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 1891 GACAGAAGTCGAAGGCTTTCTTCTCTCAGCTGATGATCTCAAGTTTGTCGCTACTCAGTA 1950
Query 1788 TCGCCGCCTCCATAGCAAGCAACTCCGACACATGTTCAGGTTTTATTCGGTGCAATGGCA 1847
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1951 TCGTCGCCTCCATAGCAAGCAACTCCGACACATGTTCAGGTTTTATTCAGTGCAATGGCA 2010
Query 1848 GACATGGGCAGCATGTTTTATACAAGCAGCATGGAAGAGACATTGTAGAAGGAAGCTTTC 1907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2011 GACATGGGCAGCATGTTTTATACAAGCAGCATGGAAGAGACATTGTAGAAGGAAGCTCTC 2070
Query 1908 AAAGGCTTTACGTGAAGAAGAAAGCAAACTACATAACACTCTTCAGAACGATGATTCAGG 1967
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2071 AAAGGCTTTACGTGAAGAAGAAGGCAAACTACATAACACTCTTCAGAACGATGATTCAGG 2130
Query 1968 AGGCAATAAGCTTAACTTAGGTGCTGCGATTTATGCGTCGAGGTTTGCTTCTCATGCTCT 2027
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2131 AGGCAATAAACTTAACTTAGGTGCTGCGATTTATGCGTCGAGGTTTGCTTCTCATGCTCT 2190
Query 2028 GAGGAATCTAAGGGCGAATGCAGCAGCACGAAACTCTAGATTTCCTCATATGTTATCTTT 2087
|||||||||||| || ||||||||||| ||||| |||||||| || || |||||| ||||
Sbjct 2191 GAGGAATCTAAGAGCAAATGCAGCAGCCCGAAATTCTAGATTCCCGCACATGTTAACTTT 2250
Query 2088 GTTGCCTCAGAAACCAGCCGATCCTGAGTTTCCTATGGATGGAACCTAATTGTGTATA 2145
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 2251 GTTGCCTCAGAAACCAGCCGATCCTGAGTTTCCTATGGATGAAACCTAGTTGTGTATA 2308
> AT2G46440.1 | Symbols: ATCNGC11, CNGC11 | cyclic nucleotide-gated
channels | chr2:19061861-19064881 FORWARD LENGTH=2340
Length=2340
Score = 1293 bits (700), Expect = 0.0
Identities = 1296/1575 (82%), Gaps = 76/1575 (5%)
Strand=Plus/Plus
Query 619 GCGTCGCTGGTAG-CAAAAGAG-CTATTGAAATGGGTAATATTTTGCCAATATGTTCCGA 676
||||||||||| | | | |||| || |||||||| | ||| || | |||||||| || |
Sbjct 687 GCGTCGCTGGT-GTC-AGAGAGAATACTGAAATGGATTATACTTAGTCAATATGTACCAA 744
Query 677 GGAT-AGCGCGAATCTATCCGCTTTTTAAAGAAGTAACAAGA-ACTTCTGGTTTGGTAAC 734
| || | || || |||||||||| ||||||||| |||||| ||| |||| |||| |
Sbjct 745 GAATCA-TTCGTATGTATCCGCTTTATAAAGAAGTGACAAGAGCCTT-TGGTACGGTAGC 802
Query 735 TGAA--ACTGCTTGGGCT-GGAGCTGCTTTAAACCTATTCCTCTACATGTTAGC-TAGCC 790
||| | || ||| | ||||||||||||||| | ||||| |||||| | || ||
Sbjct 803 AGAATCAAAGC--GGG-TCGGAGCTGCTTTAAACTTCTTCCTTTACATGCT-GCACAGTT 858
Query 791 ACGTTTTTGGGTCTTTTTGGTACTTGATTTCGATAGAAAGG-AAAGATAGATGTTGGCGC 849
| || | |||| |||||||||| |||| ||| ||||||||| |||| | |||||||||
Sbjct 859 ATGTGTGTGGGGCTTTTTGGTATTTGAGTTCAATAGAAAGGAAAAG-CACATGTTGGCGT 917
Query 850 GAAGCGTGTGCTA--AGAT-AGAC-G-GAT-GC-C-GTCATGAAAAACTG-TACTGTTCA 900
| |||||||||| | || ||| | || | | |||| | | ||| | ||| |
Sbjct 918 GCCGCGTGTGCTAGGACATCCGACTGCAATCTCACGGTCACG--GATCTGCT-TTGTAAA 974
Query 901 CCAACAGGGGA-AGACAATAGGCAGTTTT-TAAAGGGTTCTTGTCCGTTGATCGATCCC- 957
| | | || | ||||| | | ||||| | || || || || || ||||| |||
Sbjct 975 CGAGC-TGGTAGTGACAACATTC-GTTTTCTCAACACCTCATGCCCATTAATCGA-CCCT 1031
Query 958 GAAGAAATCTCAAACTCGACGGTTTTCAACTTTGGTATAT-TCGCTGATGCATTGCAGTC 1016
| ||||| ||||||| || | ||| |||||||||| | | |||||| ||| ||||
Sbjct 1032 GCCCAAATCACAAACTCCACAGACTTCGACTTTGGTATGTAT-ATTGATGCGTTGAAGTC 1090
Query 1017 TGGAGT--T-G-TG-GAGTCTAGA-GA-TTTCCCTAAGAAGTTTTTCTACTG-TTTCTGG 1068
|| || | | | || | | | || |||||| | ||| || |||| || ||| |||
Sbjct 1091 AGGGGTCCTAGAGGTGAAACCAAAGGATTTTCCC-AGGAAATTCGTCTATTGCTTT-TGG 1148
Query 1069 TGGGGTCTCCGCAATCTTAGTGCTTTGGGCCAAAACTTGAAGACGAGTGTCTTTGAAGGA 1128
||||||||||| ||| |||||||||||||||||||| || |||| || || || |||
Sbjct 1149 TGGGGTCTCCGTAATATTAGTGCTTTGGGCCAAAACCTGGAGACAAGCAACTCTGCAGGG 1208
Query 1129 GAGATCATT-TTTGCGAT-AGTCATATGTGTCTCTGGACTAGTCTTGTTTGCTCTTCTCA 1186
||||| || ||||| || | |||||||||||||||| || ||||||||||| | ||||
Sbjct 1209 GAGAT-TTTCTTTGCTATCA-TCATATGTGTCTCTGGTTTACTCTTGTTTGCTGTGCTCA 1266
Query 1187 TTGGAAATATGCAGAAATATTTGCAATCAACTACTGTA--AGAGTTGAGGAAAT-GAGAG 1243
||||||| | ||||| || ||||||||| |||| | | ||||| || ||||| || ||
Sbjct 1267 TTGGAAACGTTCAGAAGTACTTGCAATCATCTAC-G-ACTAGAGTAGATGAAATGGA-AG 1323
Query 1244 TGAAAAGGAGAGATGCAGAGCAATGGATGT-CTCATC-GGATGTTGCCAGACG-ATCTG- 1299
||||| |||||| |||| ||||||||| || ||| ||| | | ||||| | || ||
Sbjct 1324 AGAAAAAGAGAGACACAGAAAAATGGATGTCCT-ATCGGGA-GATACCAGA-GTATTTGA 1380
Query 1300 AGAAAACGTATCCGTAAATACGAACAGTATAAATGG-CAAGAAACCAAAGG-AGTTGAGG 1357
|| |||| || | | || ||| | || |||||| ||| ||||||||| | || |
Sbjct 1381 AG-GAACGCATTAGGAGATTTGAAGATTACAAATGGAGAAG-AACCAAAGGCA-CCGAAG 1437
Query 1358 AAGAAGCTCTTCTCTC-TAGTCTTCCAAAAGATCTCAGAAAGGACATTAAACGCCATCTT 1416
| ||||||||||| || ||||||||||||||| |||||| || | |||||| |||||
Sbjct 1438 AGGAAGCTCTTCT-TCGTAGTCTTCCAAAAGACCTCAGACTCGAAACCAAACGCTATCTT 1496
Query 1417 TGTCTCAATTTGCTCAAAAAGGTGCCTTGGTTTCAAGCTATGGATGATCGGTTACTAGAC 1476
| |||||| ||||||||||||||||||| | | |||||||||||||||| |||||||||
Sbjct 1497 TTTCTCAAGTTGCTCAAAAAGGTGCCTTTGCTCCAAGCTATGGATGATCAGTTACTAGAT 1556
Query 1477 GCTTTATGTGCTCGTCTCAAAACGGTTCTTTATACAGAGAACAGTTACATTGTGCGTGAA 1536
||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 1557 GCTCTATGTGCTCGTCTCAAAACGGTTCATTATACAGAGAAGAGTTACATTGTGCGTGAA 1616
Query 1537 GGTGAACCAGTGGAGGATATGTTGTTTATCATGAGAGGAAATCTAATAAGCACCACGACT 1596
||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| |||
Sbjct 1617 GGTGAACCAGTGGAGGATATGTTGTTTATAATGAGAGGAAATTTAATCAGCACCACTACT 1676
Query 1597 TATGGTGGCAAAACTGGCTTCTTCAATTCGGTTCG-CTTAGTTGCTGGTGATTTTTGTGG 1655
|||||||||| |||||| ||||||||||| ||| | |||| |||||||||||| |||||
Sbjct 1677 TATGGTGGCAGAACTGGTTTCTTCAATTCTGTT-GACTTAATTGCTGGTGATTCCTGTGG 1735
Query 1656 AGATCTTCTCACTTGGGCATTAGATCCTCTCAGTTCAAACTTCCCTATCTCTAGTAGAAC 1715
|||||||||||||||||||||| || |||| ||||| | ||||||||||||||||||||
Sbjct 1736 AGATCTTCTCACTTGGGCATTATATTCTCTTAGTTCCCAGTTCCCTATCTCTAGTAGAAC 1795
Query 1716 CGTTCAAGCTTTGACAGAAGTCGAAGGCTTTGTTCTCTCAGCTGATGATCTCAAGTTTGT 1775
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1796 CGTTCAAGCGTTGACAGAAGTCGAAGGCTTTGTTATCTCAGCTGATGATCTCAAGTTTGT 1855
Query 1776 TGCTACTCAGTATCGCCGCCTCCATAGCAAGCAACTCCGACACATGTTCAGGTTTTATTC 1835
|||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1856 CGCTACTCAGTATCGTCGCCTCCATAGCAAGCAACTCCAACACATGTTCAGGTTTTATTC 1915
Query 1836 GGTGCAATGGCAGACATGGGCAGCATGTTTTATACAAGCAGCATGGAAGAGACATTGTAG 1895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1916 ATTGCAATGGCAGACATGGGCAGCATGTTTTATACAAGCAGCATGGAAGAGACATTGTAG 1975
Query 1896 AAGGAAGCTTTCAAAGGCTTTACGTGAAGAAGAAAGCAAACTACATAACACTCTTCAGAA 1955
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1976 AAGGAAGCTCTCAAAGGCTTTACGTGAAGAAGAAGGCAAACTACATAACACTCTTCAGAA 2035
Query 1956 CGATGATTCAGGAGGCAATAAGCTTAACTTAGGTGCTGCGATTTATGCGTCGAGGTTTGC 2015
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 2036 CGATGATTCAGGAGGCAATAAACTTAACTTAGGTGCTGCGATTTATGCGTAGAGGTTTGC 2095
Query 2016 TTCTCATGCTCTGAGGAATCTAAGGGCGAATGCAGCAGCACGAAACTCTAGATTTCCTCA 2075
|||||||||||||||||||||||| || ||||||||||| ||||| |||||||| || ||
Sbjct 2096 TTCTCATGCTCTGAGGAATCTAAGAGCAAATGCAGCAGCCCGAAATTCTAGATTCCCACA 2155
Query 2076 TATGTTA-TCTTTGTTGCCTCAGAAACCAGCCGATCCTGAGTTTCCTATGGATGGAACCT 2134
|||||| | |||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 2156 CATGTTAAT-TTTGTTGCCTCAGAAACCAGCCGATCCTTAGTTTCCTATGGATGAAACCT 2214
Query 2135 AATTGTGTATAGTTG 2149
| || ||||||||||
Sbjct 2215 AGTTTTGTATAGTTG 2229
> AT4G01010.1 | Symbols: ATCNGC13, CNGC13 | cyclic nucleotide-gated
channel 13 | chr4:434569-437242 REVERSE LENGTH=2091
Length=2091
Score = 436 bits (236), Expect = 3e-121
Identities = 747/986 (76%), Gaps = 66/986 (7%)
Strand=Plus/Plus
Query 943 CCGTTGATCGATCCC-GAAGAAATCTCAAACTCGACGGTTTTCAACTTTGGTATATTCGC 1001
||||| ||| | ||| || || || |||| || || || |||||||||||||| || |
Sbjct 919 CCGTTTATC-AACCCTGATGATATAACAAATTCAACTGTCTTCAACTTTGGTATCTTTAC 977
Query 1002 TGATGCATTGCAGTCT-GGAGTTGTGGAGTCTAGA-GATTTCCCTAAGAAGTTTTTCTAC 1059
|||||| || || | ||| |||| || || ||| |||||| |||||||| ||||||
Sbjct 978 TGATGCTTTAAAGAGTGGGA-TTGTTGAATC-AGATGATTTCTGGAAGAAGTTCTTCTAC 1035
Query 1060 TGTTTCTGGTGGGGTCTCCGCAATCTT-AGTGCTTTGGGCCAAAACT-TGAAGACGAGTG 1117
|| |||||||||||| | || ||| || ||||| ||||| ||||| | | || || ||
Sbjct 1036 TGCTTCTGGTGGGGTTTGCGTAAT-TTAAGTGCATTGGGACAAAA-TCTCAATACAAGCA 1093
Query 1118 TCTTTGAAGGAGAGATCATTTTTGC-GATAGTC-ATATGTGTCTCTGGACTAGTCTTGTT 1175
|| | || || ||||| ||||| | || || || ||| | |||||||||||||| ||
Sbjct 1094 AATTCGTTGGGGAAATCATATTTGCTG-TA-TCAATTTGTATATCTGGACTAGTCTTATT 1151
Query 1176 TGCTCTTCTCATTGGAAATATGCAGAAATATTTGCAATCAACTACTGTAAGAGTTGAGGA 1235
|| || || || || |||||||||||||| ||| |||||||||| || || | |||||
Sbjct 1152 CGCACTACTTATCGGCAATATGCAGAAATACTTGGAATCAACTACAGTGAGGGAAGAGGA 1211
Query 1236 AATGAGAGTGA-AAAGGAGAGATGCAGAGCAATGGATGTCTCATCGGATGTTGCCAGACG 1294
|||||||||| ||| ||||||||||||||||||||||||||||| ||||| || || |
Sbjct 1212 GATGAGAGTGAGAAA-AAGAGATGCAGAGCAATGGATGTCTCATCGAATGTTACCCGATG 1270
Query 1295 ATCT-GAGAAAACGTATCCGTAAA-TACGAACAGTATAAATGGCAAGAAACCAAAGGAGT 1352
| || ||| ||||||||| | || || || ||||| |||||||| ||||| | ||||||
Sbjct 1271 A-CTTGAGGAAACGTATCAG-AAGGTATGAGCAGTACAAATGGCAGGAAACTAGAGGAGT 1328
Query 1353 TGAGGAAGAAG-CTCTTCT-CTCTAGTCTTCCAAAAGATCTCAGAA-AGGACATTAAACG 1409
|| |||||| | ||||| | || ||| || ||||| ||||| | || |||| |||||
Sbjct 1329 AGAAGAAGAAAAC-CTTCTGCG-TAATCTCCCTAAAGACCTCAGGAGAG-ACATCAAACG 1385
Query 1410 CCATCTT-TGTCTCAAT-TTGCTCAA-AAAGGTGCCT-TGGTTTCAAGCTA-TGGATGAT 1464
|||| || || ||| || || ||||| |||| | ||| || || | || || |||||||
Sbjct 1386 CCAT-TTCTGCCTCGATCTT-CTCAAGAAAG-TACCTCTG-TT-CGAGATAATGGATGAG 1440
Query 1465 CGGTTACTAGACGCTTTATGTG-CTCGTCTCAAAACG-GTTCTTTATACAGAGAACAGTT 1522
| || ||||| || | |||| | | || ||||| || || || || |||||||| |
Sbjct 1441 CAATTGCTAGATGCCGTGTGTGACAAG-CT-AAAACCAGTGCTCTACACCGAGAACAGCT 1498
Query 1523 A--CATTGTGCGTGAAGGTGAACCAGTGGAGGATATGTTGTTTATCATGAGAGGAAATCT 1580
| || | | || ||||| || |||||||| || ||||||||| ||||||||||||| ||
Sbjct 1499 ATGCAAT-T-CGAGAAGGAGATCCAGTGGAAGAGATGTTGTTTGTCATGAGAGGAAAACT 1556
Query 1581 AATAAGCACCACGACTTATGGTGGCAAAACTGGCTTCTTCAATTCGGT-T-CGCTTAGTT 1638
|| ||| |||| || | |||||| || |||||||| || | || | | || |
Sbjct 1557 GATGAGCGCCACCACAAACGGTGGCCGGACCGGCTTCTTTAACGCCGTATAC-CTAAAAC 1615
Query 1639 GCTGGTGATTTTTGTGG--A-GATCTTCTCACTTGGGCATTAGATCCTC--TCA--GT-T 1690
|| |||| ||||| || | ||||||||||| |||||||||||||||| || || |
Sbjct 1616 -CTAGTGACTTTTGCGGCGAAGATCTTCTCACATGGGCATTAGATCCTCAATCTTCGTCT 1674
Query 1691 CAAACTTCCCTATCTCTAGTAGAACCGTTCAAGCTTTGACAGAAGTCGAAGGCTTTGTTC 1750
|| |||| || || | |||||| ||||||||||| || ||||| |||| ||||| ||
Sbjct 1675 CATT-TTCCG-ATATCGACTAGAACAGTTCAAGCTTTAACCGAAGTAGAAGCCTTTGCTC 1732
Query 1751 TCT-CAGCTGATGATCTCAAGTTTGTTGCTACTCAGTATC-GCCGCCTCCATAGCAAGCA 1808
| | |||| |||||||||||| |||||||| | |||| || | || || |||||||| ||
Sbjct 1733 T-TGCAGCAGATGATCTCAAGCTTGTTGCTTCACAGT-TCAGACGACTACATAGCAAACA 1790
Query 1809 ACTCCGACACA-TGTTCAGGTTTTATTCGGTGCAATGGCAGA-CATGGGCAGCATGTTTT 1866
|| | ||| | | ||||||||||||||||| |||||| ||| | |||| || | |||
Sbjct 1791 GCTTCAACATACT-TTCAGGTTTTATTCGGTTCAATGG-AGAACTTGGGGTGCGTCTTTC 1848
Query 1867 ATACAAGCAGCATGGAAGAGACATTG 1892
|||||||| || ||| |||||||||
Sbjct 1849 ATACAAGCGGCGTGGCGGAGACATTG 1874
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106927160850
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5