BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg935752
Length=1087
Score E
Sequences producing significant alignments: (Bits) Value
AT2G47630.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1736 0.0
AT3G62860.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 697 0.0
> AT2G47630.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr2:19534503-19537014 FORWARD LENGTH=1293
Length=1293
Score = 1736 bits (940), Expect = 0.0
Identities = 1046/1096 (95%), Gaps = 11/1096 (1%)
Strand=Plus/Plus
Query 1 CTCAAGATCTTGCTCCGGTCATGAAGTCATCGGAATTCCAATACCACGAGGAATACATAA 60
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| | |
Sbjct 115 CTCAAGATCTAGCTCCGGTCATGAAGTCGTCGGAATTCCAATACCACGAGGAATACGTGA 174
Query 61 GAAATTCTCGAGGGGTAGAGTTGTTCGCATGTAGATGGATCCCATCATCTTCGTCTTCTC 120
||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 175 GAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATCCCATCTTCTTCGTCTTCTC 234
Query 121 CCAAAGCTCTGGTTTTCCTCTGCCATGGTTATGGAATGGAGTGTAGCGACTCCATGAAAG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 235 CCAAAGCTCTGGTTTTCCTCTGCCATGGTTATGGAATGGAGTGTAGCGACTCCATGAAAG 294
Query 181 AATGCGGAATCAGGCTGGCTTCAGCCGGATACGCGGTTTTTGGTATGGACTATGAAGGTC 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 295 AATGCGGAATCAGGCTGGCTTCAGCTGGATACGCGGTTTTTGGTATGGACTATGAAGGTC 354
Query 241 ATGGAAGGTCCTTGGGATCTCGTTGCTACATCAAGAAGTTTTCTAATGTTGTGAACGATT 300
||||||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||||
Sbjct 355 ATGGAAGGTCCATGGGATCTCGTTGCTACATCAAGAAGTTTGCGAATGTTGTGAATGATT 414
Query 301 GTTATGACTACTACACATCTATTTGTGCGCAAGAGGAGTACATGGACAAAGGCAGATTCT 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 GCTATGACTACTACACATCTATTTGTGCGCAAGAGGAGTACATGGACAAAGGCAGATTCT 474
Query 361 TGTATGGAGAATCCATGGGAGGTGCAGTCACTTTATTGCTTCACAAAAAAGATCCTTTGT 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 475 TGTATGGAGAATCCATGGGAGGCGCAGTCACTTTATTGCTTCACAAAAAAGATCCTTTGT 534
Query 421 TTTGGAACGGCGCCATTCTAGTTGCTCCTATGTGTAAGATATCTGAGAAGGTGAAGCCAC 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 535 TTTGGAACGGCGCCATTCTAGTTGCTCCAATGTGTAAGATATCTGAGAAGGTGAAGCCAC 594
Query 481 ACCCCGTAGTGATTAACCTGTTAACTAGAGTGGAAGAAATCATACCGAAATGGAAAATAG 540
|||| |||||||||| |||||||||||||| |||||||||||||| |||||||||||||
Sbjct 595 ACCCTATAGTGATTAATCTGTTAACTAGAGTCGAAGAAATCATACCTAAATGGAAAATAG 654
Query 541 TTCCAACAAAAGATGTGATTGACGCTGCTTTCAAGGACCTCGTCAAGCGAGAAGAGGTAA 600
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 655 TTCCAACAAAAGACGTGATTGACGCTGCTTTCAAGGACCTCGTCAAGCGAGAAGAGGTAA 714
Query 601 GGAACAACAAGCTGATATATCAAGACAAGCCTAGGCTCAAAACAGCACTTGAGATGCTCA 660
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 715 GGAACAACAAGCTGATATATCAAGACAAGCCTAGGCTCAAAACCGCACTTGAGATGCTTA 774
Query 661 GGACAAGCATGAACCTCGAAGACACTCTCCACGAGATAACAATGCCCTTCTTTGTATTAC 720
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 775 GGACAAGCATGAACCTAGAAGACACTCTCCACGAGATAACAATGCCATTCTTTGTATTAC 834
Query 721 ACGGAGAAGCAGATACAGTGACGGATCCAGAGATAAGCAAAGCTCTGTACGAGAAAGCTA 780
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 835 ACGGAGAAGCAGATACAGTGACGGATCCAGAGGTAAGCAAAGCTCTGTACGAGAAAGCTA 894
Query 781 GCACAAGGGACAAGACTCTCAAGTTGTATCCTGGGATGTGGCACGCTCTGACGTCAGGTG 840
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 895 GCACAAGGGACAAGACGCTCAAGTTGTATCCAGGGATGTGGCACGCTCTGACGTCAGGTG 954
Query 841 AGCCTGACTGTAATGTGGACCTTGTTTTTGCTGACATCATCAATTGGCTTGAGCTTCGAA 900
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 955 AGCCTGACTGTAACGTGGACCTTGTTTTTGCTGACATCATCAATTGGCTTGACCTTCGAA 1014
Query 901 CCGCTGACCCAGCCTCTCTCACTGTCACTCCTATACGAGTTGGTACCACTACGA-CTGTC 959
|||||||||| |||||||||||||||||||||||||||||||||| |||||||| | |||
Sbjct 1015 CCGCTGACCCTGCCTCTCTCACTGTCACTCCTATACGAGTTGGTAACACTACGAGC-GTC 1073
Query 960 CAGAGGGTTACTACTGTTA--G---T-A--A-CGGTCAAAGGAGGCCTAAACGTCCCTTC 1010
|||||||| |||||||||| | | | | |||||| |||||||||||||||||||||
Sbjct 1074 CAGAGGGTAACTACTGTTAACGGCGTTAGTAACGGTCATAGGAGGCCTAAACGTCCCTTC 1133
Query 1011 TTCAATCTCTTTTGTGGTTTGAACCGTGGCCGTTTGGTTCCAAGATCCACTGTGTAATAA 1070
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1134 TTCAATCTCCTTTGTGGTTTGAACCGTGGCCGTTTGGTTCCACGATCCACTGTGTAATAA 1193
Query 1071 AAATTTACCAAGGCAA 1086
|| |||| ||||||||
Sbjct 1194 AATTTTATCAAGGCAA 1209
> AT3G62860.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:23239446-23242251 REVERSE LENGTH=1286
Length=1286
Score = 697 bits (377), Expect = 0.0
Identities = 743/915 (81%), Gaps = 44/915 (5%)
Strand=Plus/Plus
Query 36 TTCCAATACCACGAGGAATACAT-AAGAAATTCTCGAG-G-GGTAGAGTTGTTCGCATGT 92
||||| ||| | ||||||||||| || ||| |||||| | || ||||||||||| ||
Sbjct 124 TTCCAGTACGAGGAGGAATACATCAA-AAA--CTCGAGAGACGTTGAGTTGTTCGCTTGC 180
Query 93 AGATGGATCCCATCATCTTCGTCTTCTCCCAAAGCTCTGGTTTTCCTCTGCCATGGTTAT 152
|||||| | || |||| ||||||||| |||||| || ||||||||||||||||||
Sbjct 181 AGATGG----CTTC--CTTCTTCTTCTCCCCGAGCTCTAGTCTTCCTCTGCCATGGTTAT 234
Query 153 GGAATGGAGTGTAGCGA-CTCCATGAAAGAATGCGGAATCA-GGCTGGCTTCAGCCGGAT 210
||||||||||| || | || ||||| |||||||||||| | ||||||| ||||| ||||
Sbjct 235 GGAATGGAGTGCAG-TAGCTTCATGAGAGAATGCGGAAT-ACGGCTGGCATCAGCGGGAT 292
Query 211 ACGCGGTTTTTGGTATGGACTATGAAGGTCATGGAAGGTCCTTGGGAT-CTCGTTGCTAC 269
| || || ||||| |||||||| || || ||||| ||||| ||| | ||||||||||
Sbjct 293 ATGCAGTGTTTGGGATGGACTACGAGGGGCATGGTCGGTCCAAGGG-TGCTCGTTGCTAT 351
Query 270 ATCAAGAAGTTTTCTAATGTTGTGAACGATTG-TTATGACTACTACACATCTATTTGTGC 328
|| || || || |||| | || || || || || |||||| |||||||| || | |||
Sbjct 352 ATAAAAAAATTCAGTAATATAGTAAATGACTGCTT-TGACTATTACACATCCATCTCTGC 410
Query 329 GCAAGAGGAGTACATGGACAAAGGCAGATTCTTGTATGGAGAATCCATGGGAGGTGCAGT 388
||||| || |||| || ||||| ||||| |||||||||||||| ||||||||||||||
Sbjct 411 ACAAGAAGAATACAAAGAGAAAGGTAGATTTTTGTATGGAGAATCAATGGGAGGTGCAGT 470
Query 389 CACTTTATTGCTTCACAAAAAAGATCCTT-TGTTTTGGAACGGCGC-CATTCTAGTTGCT 446
|||| ||||||||||| |||||||||| | ||||||||||| || | |||| ||||||
Sbjct 471 TGCTTTGTTGCTTCACAAGAAAGATCCTTCT-TTTTGGAACGGGGCTC-TTCTCGTTGCT 528
Query 447 CCTATGTGTAAGATATCTGAGAAGGTGAAGCCACACCCCGTAGTGATTAACCTGTTAACT 506
|| |||||||||||||| ||||||||||| |||||||| ||||| || || || ||||
Sbjct 529 CCCATGTGTAAGATATCAGAGAAGGTGAAACCACACCCAGTAGTCATAAATCTACTAACG 588
Query 507 AGAGTGGAAGAAATCATACCGAAATGGAAAATAGTTCCAACAAAAGATGTGATTGACGCT 566
||||| ||||| || ||||| |||||||| |||||||| ||||||||||| || || |||
Sbjct 589 AGAGTTGAAGATATTATACCAAAATGGAAGATAGTTCCTACAAAAGATGTTATCGATGCT 648
Query 567 GCTTTCAAGGA-CCTCGTCAAGCGAGAAGAGGTAAGGAACAACAAGCTGATATATCAAGA 625
|| |||||||| || |||||||| |||||| ||||||||||||||||||||||||||||
Sbjct 649 GCCTTCAAGGATCC-GGTCAAGCGCGAAGAGATAAGGAACAACAAGCTGATATATCAAGA 707
Query 626 CAAGCCTAGGCTCAAAACAGCACTTGAGATGCTCAGGACAAGCATGAACCTCGAAGACAC 685
|||||| || || ||||| |||||||| ||||| || || |||||| |||| ||||||||
Sbjct 708 CAAGCCAAGACTTAAAACCGCACTTGAAATGCTTAGAACGAGCATGGACCTTGAAGACAC 767
Query 686 TCTCCACGAGATAACAATGCCCTTCTTTGTA-TTACACGGAGAAGCAGATACAGTGACGG 744
|||||||||||| ||| |||| |||||||| || ||||| |||||||| | ||||| |
Sbjct 768 TCTCCACGAGATCACATTGCCTTTCTTTGTCCTT-CACGGTGAAGCAGACATTGTGACTG 826
Query 745 ATCCAGAGATAAGCAAAGCTCT-GTACGAGAAAGCTAGCACAAGGGACAAGACTC-TCAA 802
||||||||||||||||||| || || |||||| || |||||| | ||||| || | | ||
Sbjct 827 ATCCAGAGATAAGCAAAGC-CTTGTTCGAGAAGGCAAGCACACGCGACAAAAC-CATTAA 884
Query 803 G-TTGTATCCTGGGATGTGGCACGC-TCTGACGTCAGGTGAGCCTGACTG-TAATGTGGA 859
|| || || || |||||||| | | | || || ||||||||||| || ||| || ||
Sbjct 885 ACTT-TACCCAGGAATGTGGCATGGAT-TAACTTCTGGTGAGCCTGA-TGCTAACGTTGA 941
Query 860 CCTTGTTTTTGCTGACATCATCAATTGGCTTGA-GCTTCGAACCG-CTGAC-CCAGCCTC 916
||| |||||||||||||| ||||||||||||| ||| || |||| | ||| || || ||
Sbjct 942 CCTCGTTTTTGCTGACATTGTCAATTGGCTTGATGCT-CGTACCGGC-GACTCC-GCTTC 998
Query 917 TCTCACTGTCACTCC 931
||| || ||||||||
Sbjct 999 TCTGACAGTCACTCC 1013
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53262778245
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5