BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg935936
Length=1778
Score E
Sequences producing significant alignments: (Bits) Value
AT2G02020.1 | Symbols: | Major facilitator superfamily protein... 2394 0.0
AT2G02040.1 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | p... 588 7e-167
AT1G62200.1 | Symbols: | Major facilitator superfamily protein... 361 2e-98
> AT2G02020.1 | Symbols: | Major facilitator superfamily protein
| chr2:479101-481185 FORWARD LENGTH=1708
Length=1708
Score = 2394 bits (1296), Expect = 0.0
Identities = 1583/1715 (92%), Gaps = 45/1715 (3%)
Strand=Plus/Plus
Query 6 AGGAGAAAGTaaaaaaaTGGGTTCCATTGATGAAGAAAGGTCACTTC------TTGAAG- 58
|||||||||| ||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 2 AGGAGAAAGT-AAAAAATGGCTTCCATTGATGAAGAAAGGTCACTTCTTGAAGTTGAAGA 60
Query 59 ------T-T----GAAGAAGTGAAATTGTATGCTGAAGATGGTTCAATAGATATTCATGG 107
| | |||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 61 ATCTCTTATACAGGAAGAAGTAAAATTATATGCTGAAGATGGTTCAATAGATATTCATGG 120
Query 108 AAATCCACCATTGAAGCAGACAACAGGAAACTGGAAAGCTTGTCCATTCATTTTTGCTAA 167
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 121 AAACCCACCATTGAAGCAGACAACAGGAAACTGGAAAGCTTGTCCATTCATTTTTGCAAA 180
Query 168 CGAATGCTGTGAACGGTTGGCTTATTATGGTATTGCCAAGAATCTAATCACTTACTTCAC 227
||||||||| |||||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct 181 CGAATGCTGCGAACGGTTGGCTTATTATGGAATTGCCAAGAATCTCATCACGTACTTCAC 240
Query 228 CAATGAATTGCATGAGACTAATGTTTCTGCTGCTAGACATGTTATGACATGGCAAGGGAC 287
|||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct 241 AAATGAATTGCATGAGACTAATGTTTCTGCTGCTAGACACGTCATGACATGGCAAGGAAC 300
Query 288 ATGTTATATCACTCCTCTTATTGGAGCTTTAATAGCTGATGCTTATTGGGGACGATATTG 347
|||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 301 ATGTTACATCACTCCTCTTATTGGAGCTTTAATAGCTGATGCTTACTGGGGAAGATATTG 360
Query 348 GACTATTGCTTGTTTCTCTGCCATTTATTTCACTGGAATGGTTGCATTGACACTATCAGC 407
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 361 GACTATTGCTTGTTTCTCTGCCATTTATTTCACCGGAATGGTTGCATTGACACTCTCAGC 420
Query 408 TTCAGTTCCGGGT-TTGAAGCCAGCGGAATGTATTGGCTCTCTATGTCCACCAGCAACAA 466
||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 421 TTCAGTTCCGGGTCTT-AAGCCAGCGGAATGCATTGGCTCTCTATGTCCACCAGCAACAA 479
Query 467 TGGTTCAGTCTACCGTTTTATTTTCAGGTCTTTACCTTATAGCACTTGGGACTGGTGGAA 526
||||||||||||| |||||||||||||| ||||||||||| || ||||| ||||| ||||
Sbjct 480 TGGTTCAGTCTACGGTTTTATTTTCAGGGCTTTACCTTATCGCTCTTGGCACTGGAGGAA 539
Query 527 TCAAACCATGTGTTTCATCTTTTGGTGCTGATCAGTTTGATAAGACCGATCCAAGCGAAC 586
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 540 TCAAACCATGTGTCTCATCCTTTGGTGCTGATCAGTTTGATAAGACCGATCCAAGCGAAC 599
Query 587 GAGTGAGAAAAGCTTCGTTCTTTAACTGGTTTTACTTTACCATCAACATTGGTGCGTTTG 646
|||| ||||||||||| |||||||||||||||||||| || |||||||||||||| ||||
Sbjct 600 GAGTCAGAAAAGCTTCTTTCTTTAACTGGTTTTACTTCACTATCAACATTGGTGCTTTTG 659
Query 647 TTTCATCTACTGTTCTAGTTTGGATTCAAGAGAATTGTGGATGGGAATTAGGATTCTTGA 706
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 660 TTTCATCTACTGTTCTAGTTTGGATTCAAGAGAATTATGGATGGGAATTAGGATTCTTGA 719
Query 707 TACCTACCGTGTTCATGGGACTTGCTACTGTGAGTTTCTTCTTTGGCACGCCGCTTTATA 766
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 720 TACCTACCGTGTTCATGGGACTTGCTACTATGAGTTTCTTCTTTGGCACGCCGCTTTATA 779
Query 767 GATTTCAGAAACCGAGAGGGAGCCCCATTACTAGAGTCTGCCAAGTTCTTGTAGCTGCAT 826
||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||
Sbjct 780 GATTTCAGAAACCGAGAGGTAGCCCGATTACTAGCGTCTGCCAAGTTCTTGTAGCCGCAT 839
Query 827 ACCGCAAATGGTATCTCAAGCTCCCTGAAGACTGCAAGATAGAGCACACGGACGGAGAGG 886
|||| |||| | |||||||| |||||||||||| | ||| ||||| | |||
Sbjct 840 ACCGTAAATCGAATCTCAAGGTCCCTGAAGACT-C---------CAC--GGACG-A-AGG 885
Query 887 CGGAATCCGAACCCTTTCCGGATCCGTGGAAGCTCTGTACCGTGACTCAAGTCGAAGAAG 946
| | | | ||| || || | ||||||||| |||||||||||||||||||||||||
Sbjct 886 AG-A-TGCAAACACTAACC----C-GTGGAAGCTATGTACCGTGACTCAAGTCGAAGAAG 938
Query 947 TTAAGATTCTGTTACGTTTGTTCCCCATTTGGGCCTCGGGCATCATCTTCTCAGTTCTCC 1006
|||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||
Sbjct 939 TTAAGATTCTGTTACGTTTGGTCCCCATTTGGGCCTCAGGAATCATCTTCTCAGTTCTCC 998
Query 1007 ACTCACAGATTTACACGCTCTTTGTTCAACAAGGACGGTCCATGAAACGAACCATCGGCT 1066
| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 999 ATTCACAGATTTACACTCTCTTTGTTCAACAAGGACGGTGCATGAAACGAACCATCGGCT 1058
Query 1067 CATTCGAAATCCCTCCAGCTACTCTCGGGATGTTCGACACTGCAAGTGTTCTCATATCTG 1126
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1059 TATTCGAAATCCCTCCCGCAACTCTCGGGATGTTCGACACTGCAAGTGTTCTCATATCTG 1118
Query 1127 TCCCAATCTATGACCGCATCATCGTTCCCTTTGTGAGACGGTTCACAGGCTTAGCGAAAG 1186
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 1119 TCCCAATCTATGACCGCGTCATCGTTCCCTTAGTGAGACGGTTCACAGGCTTAGCTAAAG 1178
Query 1187 GATTCACTGATCTACAACGAATGGGGATTGGACTCTTTGTCTCTGTTTTGAGCTTGACAT 1246
||||||| || |||||| ||||||||||||| || |||||||||||||||||||||||||
Sbjct 1179 GATTCACCGAGCTACAAAGAATGGGGATTGGTCTTTTTGTCTCTGTTTTGAGCTTGACAT 1238
Query 1247 TTGCAGCTATCGTTGAGACGGTTCGGTTACAGTTAGCCCGAGATCTTGATCTAGTGGAAA 1306
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1239 TTGCAGCTATCGTTGAGACGGTTCGGTTACAGTTAGCTAGAGATCTTGATCTAGTGGAAA 1298
Query 1307 GTGGAGACACTGTTCCATTAACCATCTTTTGGCAAATCCCTCAGTACTTTTTTATGGGCA 1366
||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 1299 GTGGAGACATTGTTCCATTAAACATCTTTTGGCAAATCCCTCAGTACTTTTTAATGGGCA 1358
Query 1367 CTGCTGGAGTTTTCTTCTTCGTTGGTCGGATCGAGTTTTTCTATGAGCAGTCTCCAGATT 1426
||||||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||
Sbjct 1359 CTGCTGGAGTTTTCTTCTTTGTTGGGAGGATTGAGTTTTTCTATGAGCAATCTCCAGATT 1418
Query 1427 CAATGAGAAGCTTGTGTAGTGCTTGGGCTCTTCTCACTACCACACTAGGAAACTACTTGA 1486
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1419 CAATGAGAAGCTTGTGTAGTGCTTGGGCTCTTCTCACTACTACACTAGGAAACTACTTGA 1478
Query 1487 GCTCGTTGATCATTACCCTTGTGGCGTATTTGAGCGGTAAAGATTGTTGGAT-CCTTCAG 1545
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1479 GCTCGTTGATCATTACCCTTGTGGCGTATTTGAGCGGAAAAGATTGTTGGATTCCTTCAG 1538
Query 1546 ACAACATTAACAATGGACATCTTGACTACTTCTTCTGGCTTTTGGTCTGTCTTGGATGTG 1605
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||
Sbjct 1539 ACAACATTAACAATGGACATCTTGATTACTTCTTCTGGCTTTTGGTCAGTCTTGGATCTG 1598
Query 1606 TTAACATACCCGTTTTTGTCTTCTTCTCTGTCAAATACACTCACAAGAAGGCTTGATCTC 1665
|||||||||| |||||||||||||||||||| ||||| ||||| | ||||| ||||||||
Sbjct 1599 TTAACATACCTGTTTTTGTCTTCTTCTCTGTGAAATATACTCATATGAAGGTTTGATCTC 1658
Query 1666 TTCTTCTG-CTCTTGTGTGTACTTTCAAAATGTGT 1699
|||||||| |||||||||||||||||||||| |||
Sbjct 1659 TTCTTCTGGCTCTTGTGTGTACTTTCAAAAT-TGT 1692
> AT2G02040.1 | Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 |
peptide transporter 2 | chr2:487423-489832 FORWARD LENGTH=2002
Length=2002
Score = 588 bits (318), Expect = 7e-167
Identities = 655/814 (80%), Gaps = 38/814 (5%)
Strand=Plus/Plus
Query 64 GAAGTGAAATTGTATGCTGAAGATGGTTCAATAGA-TATTCATGGAAATCCACCATTGAA 122
|||||||||||||||||||||||||||||| | || | || ||||||| |||||||||||
Sbjct 177 GAAGTGAAATTGTATGCTGAAGATGGTTCAGTGGACT-TTAATGGAAACCCACCATTGAA 235
Query 123 GCAGACAACAGGAAACTGGAAAGCTTGTCCATTCATTTTTGCTAACGAATGCTGTGA-AC 181
| ||| |||||||||||||||||||||||| || ||| ||| ||| ||||| ||||| |
Sbjct 236 GGAGAAAACAGGAAACTGGAAAGCTTGTCCTTTTATTCTTGGTAATGAATGTTGTGAGA- 294
Query 182 GGTTGGCTTATTATGGTATTGCCAAGAATCTAATCACTTACTTCACCAATGAA--TTGCA 239
|| | ||||| ||||||||||| |||| ||||||||||| |||||| | || || ||
Sbjct 295 GGCTAGCTTACTATGGTATTGCTGGGAATTTAATCACTTACCTCACCACT-AAGCTT-CA 352
Query 240 -TGA-GACTAATGTTTCTGCTGCTAGACATGTTATGACATGGCAAGGGACATGTTATATC 297
| || |||||||||||||||| | | |||| |||||||||||||| |||||| ||
Sbjct 353 CCAAGGA--AATGTTTCTGCTGCTACAAACGTTACCACATGGCAAGGGACTTGTTATCTC 410
Query 298 ACTCCTCTTATTGGAGCT-TTAATAGCTGATGCTTATTGGGGACGATATTGGACTATTGC 356
|||||||| ||||||||| || | ||||||||||| |||||||| || ||||| || ||
Sbjct 411 ACTCCTCTCATTGGAGCTGTT-CTGGCTGATGCTTACTGGGGACGTTACTGGACCATCGC 469
Query 357 TTGTTTCTCTGCCATTTATTTCACT-GGAATGGT-TGCATTGACACTATCAGCTTCAGTT 414
||||||||| | |||||||||| | || || || ||| || || || ||||||||||||
Sbjct 470 TTGTTTCTCCGGGATTTATTTCA-TCGGGAT-GTCTGCGTTAACTCTTTCAGCTTCAGTT 527
Query 415 CCGGGTTTGAAGCCAGCGGAATGTATTGGCT--CTCTATGTCCACCAGCAACAATGGTTC 472
|||| ||||||||||||||||||||||| | || | |||||| | ||||| | ||
Sbjct 528 CCGGCATTGAAGCCAGCGGAATGTATTGG-TGACT-TTTGTCCATCTGCAACGCCAGCTC 585
Query 473 AGTCTACCG-TTTTATTTTCAGGTCTTTACCTTATAGCACTTGGGACTGGTGGAATCAAA 531
||| | || | || ||| || |||||||| || || ||||| ||||| || ||||||
Sbjct 586 AGTAT-GCGATGTTCTTTGGTGGGCTTTACCTGATCGCTCTTGGAACTGGAGGTATCAAA 644
Query 532 CCATGTGTTTCATCTTTTGGTGCTGATCAGTTTGATAAGACCGATC-CAAGCGAACGAGT 590
|| ||||| ||||| || ||||| |||||||||||| | || || | | | ||||||||
Sbjct 645 CCGTGTGTCTCATCCTTCGGTGCCGATCAGTTTGATGACACGGA-CTCTCGGGAACGAGT 703
Query 591 GAGAAAAGCTTCGTTCTTTAACTGGTTTTACTT-TACCATCAACATTGGTGCGTTTGTTT 649
|||||||||||||||||||||||||||||||| | ||||||| ||||| || |||| |
Sbjct 704 TAGAAAAGCTTCGTTCTTTAACTGGTTTTACTTCT-CCATCAATATTGGAGCACTTGTGT 762
Query 650 CATCTACTGTTCTAGTTTGGATTCAAGAGAATTGTGGATGGGAATTAGGATTCTTG-ATA 708
|||||| | ||||||||||||||||||||||| | || |||| ||||| || | | |||
Sbjct 763 CATCTAGTCTTCTAGTTTGGATTCAAGAGAATCGCGGGTGGGGTTTAGGGTT-TGGGATA 821
Query 709 CCTACCGTGTTCATGGGACTTGCTACTGTGAGTTTCTTCTTTGGCACGCCGCTTTATAGA 768
|| || |||||||||||||| || | || ||||||||||||||||| || ||||||||
Sbjct 822 CCAACAGTGTTCATGGGACTAGCCATTGCAAGTTTCTTCTTTGGCACACCTCTTTATAGG 881
Query 769 TTTCAGAAACC-GAGAGGGAGCCCCATTACTAG-AGTCTGCCAAGTTCTTG-TAGCTGCA 825
||||||||||| | |||| ||||| || ||| | | | | |||||| | || | ||| |
Sbjct 882 TTTCAGAAACCTG-GAGGAAGCCCTATAACTCGGATT-TCCCAAGT-CGTGGTTGCTTCG 938
Query 826 TACCGCAAATGGTATCTCAA-GCTCCCTGAAGAC 858
| ||| |||| || | |||| | |||||||||||
Sbjct 939 TTCCGGAAATCGTCTGTCAAAG-TCCCTGAAGAC 971
> AT1G62200.1 | Symbols: | Major facilitator superfamily protein
| chr1:22982036-22984359 REVERSE LENGTH=1909
Length=1909
Score = 361 bits (195), Expect = 2e-98
Identities = 588/769 (76%), Gaps = 61/769 (8%)
Strand=Plus/Plus
Query 913 TGGAAGCTCTGTACCGTGACTCAAGTCGAAGAAGTTAAGATTCTGTTACGTTTGTTCCCC 972
|||||||| ||||| || |||||||||||||||||||||| ||| | ||| |||| ||
Sbjct 1064 TGGAAGCTATGTACTGTAACTCAAGTCGAAGAAGTTAAGACTCTAATCCGTATGTTTCCA 1123
Query 973 ATTTGGGCCTCGGGCATCATCTTCTCAGTTCTCCACTCACAGATTTACACGCTCTTTGTT 1032
|| ||||||||||| ||| ||| ||| || || | |||||||||| ||| || || ||
Sbjct 1124 ATCTGGGCCTCGGGGATCGTCTACTCGGTCCTATATTCACAGATTTCCACTCTATTCGTG 1183
Query 1033 CAACAAGGACGGTCCATGAAACGAACCATCGGCTCATTCGAAATCCCTCCAGCTAC-TCT 1091
|||||||||||||||||||| |||| ||| | || ||||| |||||||| ||| | | |
Sbjct 1184 CAACAAGGACGGTCCATGAACCGAATAATCCGTTCTTTCGAGATCCCTCCTGCTTCAT-T 1242
Query 1092 CGGGATGTTCGACACTGC-AAGT-GTTCTCATATCTGTCCCAATCTATGACCGCATCATC 1149
|||| | |||||||| | | | || |||||||| ||||||| |||||||| || ||
Sbjct 1243 CGGGGTTTTCGACAC-ACTTA-TCGTGCTCATATCCATCCCAATATATGACCGTTTCCTC 1300
Query 1150 GTTCCCTTTGTGAGACGGTTCACAGGCTTAGCGAAAGGATTCACTGATCTACAACGAATG 1209
|| |||||||| |||||||||||||| || | ||||| || |||||||| || ||||||
Sbjct 1301 GTACCCTTTGTAAGACGGTTCACAGGGATACCAAAAGGGTTAACTGATCTGCAGCGAATG 1360
Query 1210 GGGATTGGACTCTTTGTCTCTGTTTTGAGC-TTGACATTTGCAGCTATCGTTGAGACGGT 1268
|| ||||| || ||| ||||||| | ||| ||| || ||||||||| |||||||| ||
Sbjct 1361 GGCATTGGTCTTTTTCTCTCTGTCCTAAGCATTG-CAGCTGCAGCTATTGTTGAGACAGT 1419
Query 1269 TCGGTTACAG-TTAGCCCGAGATCTTGATCTAGTGGAAAGTGGAGACACTGTTCCATTAA 1327
||||| ||| || || | ||| | | | | || | || | | | | || |
Sbjct 1420 GCGGTTGCAGCTT-GCTCAAGA-C-T--T-T-GTTGCAA-T---G--A--G---CA-T-- 1458
Query 1328 CCATCTTTTGGCAAATCCCTCAGTACTTTTTTATGGGCACT-GCTGGA-GT-TTTCTTCT 1384
| |||||||| |||||||||||| | | ||||| | | || || || ||| ||||
Sbjct 1459 --A--TTTTGGCAGATCCCTCAGTACATACTAATGGG-AATAGC-AGAGGTCTTT-TTCT 1511
Query 1385 TCGTTGGTCGGA-TCGAGTTTTTCTATGA-GCAGTCTCCAGATTCAATGAGAAGCT-TGT 1441
|| |||||| || | |||||||||||||| | | ||||| ||| |||||||||| | | |
Sbjct 1512 TCATTGGTC-GAGTTGAGTTTTTCTATGATG-AATCTCCTGATGCAATGAGAAG-TGTAT 1568
Query 1442 GTAGTGCTTGGGCTCTTCTCACTACCACACTAGGAAACTACTTGAGCTCGTTGATCATTA 1501
| || |||| ||| || |||| |||| || | |||| |||| |||||||||||||| | |
Sbjct 1569 GCAGCGCTTTGGCACTACTCAATACCGCAGTCGGAAGCTACCTGAGCTCGTTGATCCTCA 1628
Query 1502 CCCTTGTGGCGTATTT--GAG--C-----GGTAAAGATTGTTGGATCCTTCAGACAACAT 1552
| |||||||||||||| || | ||||||||| ||||| | | ||||| || |
Sbjct 1629 CTCTTGTGGCGTATTTCACAGCTCTTGGAGGTAAAGATGGTTGGGT--TCCAGACGACCT 1686
Query 1553 TAACAATGGACATCTTGACTACTTCTTCTGGCTTTTGGTCTGTCTTGGA-TGTGTTAACA 1611
||| || |||||||||||||||||||||||||||||||||| ||||||| | ||| ||||
Sbjct 1687 TAATAAAGGACATCTTGACTACTTCTTCTGGCTTTTGGTCTCTCTTGGACT-TGTCAACA 1745
Query 1612 TACCCGTTTTTGTCTTC-TTCTCTGTCAAATACACTCACAAGAAGGCTT 1659
| || |||| || ||| || | ||| || |||| | ||||||||||
Sbjct 1746 TTCCTGTTTATGCCTTGATT-TGTGTTAAGCACACAAAGAAGAAGGCTT 1793
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87951354840
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5