BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg936063
Length=1315
Score E
Sequences producing significant alignments: (Bits) Value
AT2G02660.1 | Symbols: | F-box associated ubiquitination effec... 1445 0.0
AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6... 1214 0.0
AT2G16450.1 | Symbols: | F-box and associated interaction doma... 1162 0.0
AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-84... 693 0.0
AT2G23160.1 | Symbols: | F-box family protein | chr2:9862470-9... 547 8e-155
AT1G47300.1 | Symbols: | F-box family protein | chr1:17339561-... 63.9 4e-09
> AT2G02660.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr2:738504-739769 FORWARD LENGTH=1266
Length=1266
Score = 1445 bits (782), Expect = 0.0
Identities = 1116/1272 (88%), Gaps = 43/1272 (3%)
Strand=Plus/Plus
Query 68 TGTCGAGATTACCTTCAAAGTCAGTGGCGAGGTTTCGTTGCGTGTCGAAGGGATGGGCAT 127
||| ||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 2 TGTTGAGATTATCTTCAAAGTCAGTGGCAAGGTTTCGTTGCGTGTCGAAGCAATGGGCAT 61
Query 128 CAATGTTTGCTAGTCCCTACTTCAAGG-AGTTGTTCGTGACCAGGTCCTCCGCTAAGCCG 186
|||||||||||||||| |||||| ||| |||||||| ||||||||||||||||||||||
Sbjct 62 CAATGTTTGCTAGTCCATACTTC-AGGAAGTTGTTCCAGACCAGGTCCTCCGCTAAGCCG 120
Query 187 CGTCTCTTATTCGCCATGGCAGGCAACGTAACCGAAGAAGATGACTATGTGTGGAGCTTC 246
|||||||||||||||| |||| | ||| || ||||||||| || | || | || |||
Sbjct 121 AGTCTCTTATTCGCCATCGCAGACTACGGAATTGAAGAAGATTAC-A-GTAT-GAAATTC 177
Query 247 TTCTCAACGCCTCAGCTTGAGAATCCATATGAGAAATCGTCACCAACTCTTGTAGCAGCC 306
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 178 TTCTCATCGCCTCAGCTTGAGAATCCATATGAGAAATCGTCGCCAACTCTTGTAGCAGCC 237
Query 307 GCTGAATTTCATGTGAAGTTCTCTCCAGAAAAGTTACAGAT-A-T-A-TCATTCTTATGA 362
||||||||||||||||||||||||||||| |||||| | | | | | ||||||||| ||
Sbjct 238 GCTGAATTTCATGTGAAGTTCTCTCCAGACAAGTTA-ATACCAATCAATCATTCTTACGA 296
Query 363 CCCAAGATATTTTTCAATTGGCTACGCTTCTGGCTTGATCTATATCTATGGTTG-TCGAT 421
||||||||||||||||||||||||||| ||||||||||| |||||||||||| | |||||
Sbjct 297 CCCAAGATATTTTTCAATTGGCTACGCCTCTGGCTTGATATATATCTATGGT-GATCGAT 355
Query 422 ACCAGGGAAGACCTGTGATATGTAACCCCAACACAGGACGGTATGCGATCTTACCTGATC 481
|| || |||||| | |||||||||||||||||||||||||||| |||||||||| |||
Sbjct 356 ACGTGGCTAGACCTCTAATATGTAACCCCAACACAGGACGGTATGTGATCTTACCTAATC 415
Query 482 GTTATACTTACAGAAAGGCGTATAGCTTTTTCGGGTTTGACCCCATTGACAAGCACTACA 541
| ||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||
Sbjct 416 GGTATACTTACAGAAAGGCGTATAGCTTTTTCGGGTTTGACCCGATTGGCAAGCAATACA 475
Query 542 AGGTATTGTCCAT-GCGTTATTCATGTGGCCCTGGTCATAATAAAATTCTTACATTAGGA 600
||| ||||||||| || |||| ||| || ||||||| | ||||||| ||||||||||||
Sbjct 476 AGGCATTGTCCATTGC-TTATCCATCTGATCCTGGTCGTCATAAAATACTTACATTAGGA 534
Query 601 GATGGAGATCTCACGTGGAGAAAGATAAAGATCTCACCAG-A--ACGACCTGAAATTGAG 657
||||||||||| || ||||||||||| || || || || | | |||||||| ||| ||
Sbjct 535 GATGGAGATCTGACATGGAGAAAGATCAA-ATGTC-CC-GTACCACGACCTGGTATTAAG 591
Query 658 AGTGATGGGATATGCATCAATGGGGTTTTGTATTTCTTAGCTGTGGGAGTTGAACT-GAA 716
|||||||||||||||||||||||||||||||||||||||||| | || ||| || ||
Sbjct 592 GGTGATGGGATATGCATCAATGGGGTTTTGTATTTCTTAGCTGAGAGAAATGAGCTAGA- 650
Query 717 GTTTGAATATGTGATAGTTTGCTTTGATGTTCGGTCTGAGACATTCACCTATATTGGCGT 776
|| ||| |||||||||||||||||||||||| ||||||||| |||||| ||||||| |||
Sbjct 651 GTCTGATTATGTGATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCACATATATTGACGT 710
Query 777 AGAAAGGTTTTGTCGATTGATCAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGGA 836
||| ||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 711 AGAGAGGATTTGTCGATTGATAAACTACAAGGGCAAATTAGCTATGATTTATTGGGAGGA 770
Query 837 TGATGAAGACATCTATGAGATTTGTTTT-TA--TGGGAAGGATCTCGATGATTATTTGGA 893
||||| ||||| ||||||||| | | | ||||||| |||| ||| | ||||||||
Sbjct 771 TGATGTCGACATTTATGAGATTAATCATATGGCTGGGAAGAATCTTGATAAGTATTTGGA 830
Query 894 CGAAAATCTCGATG------CCATTAATGAGTTGCGTGTGTGGGTTCTAGAGGATCTTGA 947
||||||||||||| ||| ||||||||||| ||||||||||||||||||| ||||
Sbjct 831 GGAAAATCTCGATGTTGATGCCACTAATGAGTTGCATGTGTGGGTTCTAGAGGATGTTGA 890
Query 948 GAAACAGAAATGGTCTAAATATGCCTACACTTGGACCGATGATA-AGTTCTTCCGTCGTC 1006
||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 891 GAAACAGGAATGGTCTAAATATGCCTACACTTGGACCGATGATACA-TTCTTCCGTCGTC 949
Query 1007 ACCTTTCCATCGCTGGAGCCACTGCTTCGGGTGAAATAGTGTTTTCCATGCGCAAGTATA 1066
|||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||| |
Sbjct 950 ACCTTTCCATTGCTGGAGCCACTGTTTCGGGTGAAATAGTGTTTTCGATACGCAAGTACA 1009
Query 1067 CATCTAAACAACCGTTTTATGTTTTTTACTTCAATCCCGAA-CGGAACACTCTCCAACGT 1125
||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||
Sbjct 1010 CATCTAAACAACCGTTTTATGTTTTCTACTTCAATCCCGAATCG-AACACTCTCCAACGT 1068
Query 1126 GTTGAAATCCAAGGTTTTGGCGAAGCGTTTAAG--A-AAACTTGTA-CTGTTTGCACCTT 1181
|| |||| |||||||||||| ||||| |||||| | ||||||||| | ||| |||||||
Sbjct 1069 GTAGAAACCCAAGGTTTTGGTGAAGCATTTAAGGCAGAAACTTGTAGC-GTTCGCACCTT 1127
Query 1182 TGTAAACCACGTAGAGGATCTTGATGTTAACGATTTAAAGCAACTCAAGTCAGTCCATCC 1241
|||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 1128 TGTAAACCACGTAGAGAATCTTGATGTTAACGATTTAAAACAACTCAAGTCAGGCCATCC 1187
Query 1242 TCCGTTAGTGAAGTCAGAATATTAT-GAATCATCAGATTCAGAATCAGACTGAGAAGGGA 1300
||| || ||| || ||||| ||||| | | |||||| ||||| ||||| | ||| || |
Sbjct 1188 TCCATTGGTGCAGCCAGAAAATTATTGTCT-ATCAGACTCAGATTCAGAATCAGACGG-A 1245
Query 1301 CAAGGAGATGAA 1312
||||||||||||
Sbjct 1246 CAAGGAGATGAA 1257
> AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6818205
REVERSE LENGTH=1414
Length=1414
Score = 1214 bits (657), Expect = 0.0
Identities = 1093/1295 (84%), Gaps = 64/1295 (5%)
Strand=Plus/Plus
Query 1 TTCTTCGTTCGATAC-GCAATCATGAATTCATCATCTTCCTTAACGAATGATCTCATCAT 59
||||||||| ||| | ||||||||||| || || | | ||||||||||||||| | |
Sbjct 113 TTCTTCGTTTGAT-CGGCAATCATGAA-TC--CAAGTACAATAACGAATGATCTCACCGT 168
Query 60 GGAGATATTGTCGAGATTACCTTCAAAGTCAGTGGCGAGGTTTCGTTGCGTGTCGAAGGG 119
|||||| ||||||||||| ||| |||||||||| |||||||||| |||||||||||||
Sbjct 169 GGAGATTTTGTCGAGATTGCCTGCAAAGTCAGTCGCGAGGTTTCATTGCGTGTCGAAGCA 228
Query 120 ATGGGCATCAATGTTTGCTAGTCCCTACTTCAAGGAGTTGTTCGTGACCAGGTCCTCCGC 179
||||| |||||| |||| |||||| || ||||||||||||||| |||||||||||||| |
Sbjct 229 ATGGGGATCAATTTTTGGTAGTCCATATTTCAAGGAGTTGTTCCTGACCAGGTCCTCCAC 288
Query 180 TAAGCCGCGTCTCTTATTCGCCATGGCAG-GCAACGT-AACCGAAGAAG-ATGACTATGT 236
||||||||| ||||||||||||||||||| | || || || ||||| || | ||| |||
Sbjct 289 TAAGCCGCGCCTCTTATTCGCCATGGCAGAG-AAAGTCAA-CGAAG-AGAAAAACTGTGT 345
Query 237 GTGGAGCTTCTTCTCAACGCCTCAGCTTGAGAATCCATATGAGAAATCGTCACCAACTCT 296
|||||| |||||||| ||||| |||||||||||||||||||||||||| ||| | |||||
Sbjct 346 GTGGAGGTTCTTCTCGACGCCACAGCTTGAGAATCCATATGAGAAATCCTCATCGACTCT 405
Query 297 TGTAGCAGCCGCTGAATTTCATGTGAAGTTCTCTCCAGAAAAGTTACAGATATATCATTC 356
|||||||||||||||||||||||| |||||||||||||| ||| || | || | |||||
Sbjct 406 TGTAGCAGCCGCTGAATTTCATGTTAAGTTCTCTCCAGACAAGCTATATATCTGTCATTG 465
Query 357 TTATGACCCAAGATATTTTTCAATTGGCTACGCTTCTGGCTTGATCTATATCTATGGTTG 416
|||||||| || ||||||||||||||||||||| || || ||||||||| | ||||| ||
Sbjct 466 TTATGACCTAAAATATTTTTCAATTGGCTACGCCTCGGGGTTGATCTATTTATATGG-TG 524
Query 417 -TCGATACCAGGGAAGACCTGTGATATGTAACCCCAAC-ACAGGACGGTATGCGATCTTA 474
|||| | ||| | |||| | |||||||||||| || |||||||||||||| ||||||
Sbjct 525 ATCGAGGCGAGGCTACACCTCTAATATGTAACCCC-ACTACAGGACGGTATGCCATCTTA 583
Query 475 CCTGATCGTTATACTTACAGAAAGGCGTATAGCTTTTTCGGGTTTGACCCCATTGACAAG 534
||| |||| |||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 584 CCTAATCGGTATACTTACAGAAAGGCGTATAGCTTTTTCGGATTTGACCCGATTGACAAG 643
Query 535 CACTACAAGGTATTGTCCATGCGTTATTCATGTGGCCCTGGTCATAATAAAATTCTTACA 594
|| ||||||| ||||||||| |||| ||| ||| |||||||||| |||||||||||||
Sbjct 644 CAATACAAGGCATTGTCCATATTTTATCCATCTGGTCCTGGTCATAGTAAAATTCTTACA 703
Query 595 TTAGGAGATGGAGATCTCACGTGGAGAAAGATAAA--GATCTC--ACCA---GA-ACGAC 646
|| || | |||| || | | ||||||||||||||| | || | || | || | |||
Sbjct 704 TTTGGGGCTGGACATATGAAGTGGAGAAAGATAAATTG-TCCCTTACGATATGATA-GAC 761
Query 647 CTGAAATTGAGAGTGATGGGATATGCATCAATGGGGTTTTGTATTTCTTAGCT-GT--G- 702
||| ||| ||||||| ||||||||||||||||| |||||||||| ||||| | | |
Sbjct 762 ATGATATTAAGAGTGAAGGGATATGCATCAATGGAGTTTTGTATTACTTAGGTAGCACGT 821
Query 703 -GGAGT-TG--AA-------C-TG--A-AGT-T-TGAATATGTGATAGTTTGCTTTGATG 745
||| | || || | || | ||| | ||| |||||||||||||||||||||
Sbjct 822 CGGATTGTGTTAAGGATGGTCATGGCATAGTATCTGATTATGTGATAGTTTGCTTTGATA 881
Query 746 TTCGGTCTGAGACATTCACCTATATTGGCGTAGAAAGGTTTTGTCGATTGATCAACTACA 805
|| ||||||||| |||||| | ||||| |||||||||||||||||||||||||||||| |
Sbjct 882 TTAGGTCTGAGAAATTCACGTTTATTGACGTAGAAAGGTTTTGTCGATTGATCAACTATA 941
Query 806 AGGGCAAATTAGCTGTGATTTATTGGGAGGATGATGAAGACATCTATGAGATTTGTTTTT 865
|||| ||||||||||||||||||||||||||||||| ||||| ||| || ||| || ||
Sbjct 942 AGGGAAAATTAGCTGTGATTTATTGGGAGGATGATGTCGACATTTATAAGCTTTATTATT 1001
Query 866 ATGGGAAGGATCTCGATGATTATTTGGACGAA-AATCT---CGATGC---CATTAATGAG 918
|| | | || || || ||| |||| | | ||| | ||||| ||||||||||
Sbjct 1002 C-GG-ATG--TC--GACGAATATGTGGA-GTATAATATTAACGATGATGACATTAATGAG 1054
Query 919 TTGCGTGTGTGGGTTCTAGAGGATCTTGAGAAACAGAAATGGTCTAAATATGCCTACACT 978
|||||||||||||||||||||||| || |||||||| ||||||| |||||||||||||||
Sbjct 1055 TTGCGTGTGTGGGTTCTAGAGGATGTTAAGAAACAGCAATGGTCGAAATATGCCTACACT 1114
Query 979 TGGACCGATGATA-AGTTCTTCCGTCGTCACCTTTCCATCGCTGGAGCCACTGCTTCGGG 1037
||||||||||||| | ||||||||||||| ||||||||||||||| |||||||||||
Sbjct 1115 TGGACCGATGATAGA-TTCTTCCGTCGTCGTGTTTCCATCGCTGGAGGGACTGCTTCGGG 1173
Query 1038 TGAAATAGTGTTTTCCATGCGCAAGTATACATCTAAACAACCGTTTTATGTTTTTTACTT 1097
||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||| |||||
Sbjct 1174 TGAAATAGTGTTTTCGATGCTCAAATATACACCTAAGCAACCGTTTTATGTTTTCTACTT 1233
Query 1098 CAATCCCGAACGGAACACTCTCCAACGTGTTGAAATCCAAGGTTTTGGCGAAGCGTTTAA 1157
|||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| ||
Sbjct 1234 CAATCCCGAAAGGAACACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAAGTGTTAAA 1293
Query 1158 GAAAACTTGTACTGTTTGCACCTTTGTAAACCACGTAGAGGATCTTGATGTTAACGA-TT 1216
||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||| ||
Sbjct 1294 GAAAACTTGTAGAGTTTGCACCTTTGTAAACCACGTAGAGGATCTTAATGTTCACGACTT 1353
Query 1217 TAAAGCAACTCAAGTCAGTCCATCCTCCGTTAGTG 1251
|||| |||||||||||||||||||| || || |||
Sbjct 1354 TAAA-CAACTCAAGTCAGTCCATCCCCCATTGGTG 1387
> AT2G16450.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:7131520-7132803 REVERSE LENGTH=1284
Length=1284
Score = 1162 bits (629), Expect = 0.0
Identities = 1077/1283 (84%), Gaps = 72/1283 (6%)
Strand=Plus/Plus
Query 41 TAACGAATGATCTCATCATGGAGATATTGTCGAGATTACCTTCAAAGTCAGTGGC-GAGG 99
|||||| |||||||||| ||||||||||||||||||| ||| |||| ||||| | ||||
Sbjct 17 TAACGATTGATCTCATCTTGGAGATATTGTCGAGATTGCCTGCAAAATCAGT-CCGGAGG 75
Query 100 TTTCGTTGCGTGTCGAAGGGATGGGCATCAATGTTTGCTAGTCCCTACTTCAAGGAGTTG 159
|||| ||||||||||||| ||||||||||||| |||| |||||| || ||||||||||||
Sbjct 76 TTTCATTGCGTGTCGAAGCGATGGGCATCAATTTTTGGTAGTCCATATTTCAAGGAGTTG 135
Query 160 TTCGTGACCAGGTCCTCCG-CTAAGCCGCGTCTCTTATTCGCCATGGCAG-GCAACGTAA 217
||| |||||||||||| || |||||||||| |||||||||||||| |||| | || | ||
Sbjct 136 TTCCTGACCAGGTCCT-CGACTAAGCCGCGCCTCTTATTCGCCATCGCAGAGAAAGGCAA 194
Query 218 CCGAAGAAG-ATGACTATGTGTGGAGCTTCTTCTCAACGCCTCAGCTTGAGAATCCATAT 276
| ||| || | |||| ||||||||| |||||||| |||| ||||||||||||||||||
Sbjct 195 -CAAAG-AGAAAGACTGTGTGTGGAGGTTCTTCTCGTCGCCACAGCTTGAGAATCCATAT 252
Query 277 GAGAAATCGTCACCAACTCTTGTAGCAGCCGCTGAATTTCATGTGAAG-TTCTCTCCAGA 335
|||||||| ||| | |||||||||||| ||||||||||||||||| || |||||||||||
Sbjct 253 GAGAAATCCTCATCGACTCTTGTAGCAACCGCTGAATTTCATGTG-AGATTCTCTCCAGA 311
Query 336 AAAGT-TACAGATATATCATTCTTATGACCCAAGATATTTTTCAATTGGCTACG-CTTCT 393
|| | ||| ||| | ||||| |||||||| || ||||||||||||||| || | ||| |
Sbjct 312 CAA-TCTACTGATCTGTCATTATTATGACCTAAAATATTTTTCAATTGGTTATGCCTT-T 369
Query 394 GGCTTGATCTATATCTATGGTTGTCGATACCAGGG-AAGACCTGTGATATGTAACCCCAA 452
||||||||||||||||||||| |||| || ||| |||||| | |||||||||||| |
Sbjct 370 GGCTTGATCTATATCTATGGTAATCGAGGCC-GGGCTAGACCTCTAATATGTAACCCC-A 427
Query 453 C-ACAGGACGGTATGCGATCTTACCTGATCGTTATACTTACAGAAAGGCGTATAGCTTTT 511
| |||||||||||||| ||||||||| |||| ||||||||||||||||||| ||||||||
Sbjct 428 CTACAGGACGGTATGCCATCTTACCTAATCGGTATACTTACAGAAAGGCGTTTAGCTTTT 487
Query 512 TCGGGTTTGACCCCATTGACAAGCACTACAAGGTATTGTCCATGCG-TTATTCATGTGGC 570
||||||||||||| ||||||||||| ||||||| |||||||||| | |||| ||| |||
Sbjct 488 TCGGGTTTGACCCAATTGACAAGCAATACAAGGCATTGTCCATG-GTTTATCCATCTGGT 546
Query 571 CCTGGTCATAATAAAATTCTTACATTAGGAGATGGAGATCTCACGTGGAGAAAGATAAAG 630
|||||||||| || | || ||||||| |||| ||||||||| | |||||||| ||||||
Sbjct 547 CCTGGTCATAGTAGAGTTATTACATTTGGAGCTGGAGATCTGAAGTGGAGAAGGATAAA- 605
Query 631 AT-CTCACCAGAACGACCTGAAATTGAGAGTGATGGGATATGCATCAATGGGGTTTTGTA 689
|| ||| | |||| ||| ||| ||||||| ||| |||| |||||||||||||||||
Sbjct 606 ATGTTCA-TTG--CGACATGATATTAAGAGTGAAGGGGTATGTATCAATGGGGTTTTGTA 662
Query 690 TTTCTTA---G---C-T--G--T-G-G--GAG-T--T-G-AA-C-TG-AA-GTTTGAATA 725
|| |||| | | | | | | | | | | | | || | | || || || ||
Sbjct 663 TTACTTAGGTGACACGTCGGATTGGAGTCGCGTTAATGGTAATCACGTAACGTCTGGTTA 722
Query 726 TGTGATAGTTTGCTTTGATGTTCGGTCTGAGACATTCACCTATATTGGCGTAGAAAGGTT 785
| |||||||||||||||||||| ||||||| | |||||||| ||||| |||| |||||||
Sbjct 723 TATGATAGTTTGCTTTGATGTTAGGTCTGAAAAATTCACCTTTATTGACGTAAAAAGGTT 782
Query 786 TTGTCGATTGATCAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGGATGATGAAGA 845
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 783 TTGTCGATTGATAAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGGATGATGTCGA 842
Query 846 CA-TCTATGAGATTTGTT--TTTATGGG-A-AGGATCTCGATGATTATTTGGACGAA-AA 899
|| || | ||| ||| || | ||| | | ||| |||| || ||| |||| ||| ||
Sbjct 843 CATTC-AAGAGCTTTATTACAAAAAGGGTATA-GATGTCGAGGAATATGTGGA-GAATAA 899
Query 900 --T---CTC-GATGCCATTAATGAGTTGCGTGTGTGGGTTCTAGAGGATCTTGAGAAACA 953
| | | ||||||| |||||||||| |||||||| |||||| |||| ||||||||||
Sbjct 900 TGTCAACGCTGATGCCACTAATGAGTTGTGTGTGTGGATTCTAGCGGATGTTGAGAAACA 959
Query 954 GAAATGGTCTAAATATGCCTACACTTGGACCGATGATAAGTTCTTCCGTCGTCACCTTTC 1013
| ||||||| ||| |||||||||||||||||||||| ||||||||||||||| | ||
Sbjct 960 GGAATGGTCGAAACATGCCTACACTTGGACCGATGAAAAGTTCTTCCGTCGTTTGGTATC 1019
Query 1014 CATCGCTGGAGCCACTGCTTCGGGTGAAATAGTGTTTTCCATGCGCAAGTATACAT-CTA 1072
||||||||||| |||||||||||||||||||||||||| |||||||||| || || |||
Sbjct 1020 CATCGCTGGAGTGACTGCTTCGGGTGAAATAGTGTTTTCGATGCGCAAGTGTA-ATCCTA 1078
Query 1073 AACAACCGTTTTATGTTTTTTACTTCAATCCCGAACGGAACACTCTCCAACGTGTTGAAA 1132
|||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||
Sbjct 1079 AACAACCGTTTTATGTGTTTTACTTCAATCCCGAAAGGAACAGTCTCCAACGTGTTGAAA 1138
Query 1133 TCCAAGGTTTTGGCGAAG-CGTTTAAGAAAACTTGT-ACTGTTTGCACCTTTGTAAACCA 1190
| ||||||||||| |||| || ||| |||| ||||| || ||||||||||||||||||||
Sbjct 1139 TTCAAGGTTTTGGTGAAGCCG-TTACGAAATCTTGTGAC-GTTTGCACCTTTGTAAACCA 1196
Query 1191 CGTAGAGGATCTTGATGTTAACGATTTAAAGCAACTCAAGTCAGTCCATCCTCCGTTAGT 1250
|||||||||||| ||||| |||||||||| ||||||||||||||||||||||| || ||
Sbjct 1197 CGTAGAGGATCTCAATGTTTACGATTTAAAACAACTCAAGTCAGTCCATCCTCCATTGGT 1256
Query 1251 -GAAGTCAGAATATTATGAATCA 1272
|| | ||||||||||||| |||
Sbjct 1257 CGA-GCCAGAATATTATGATTCA 1278
> AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-846616
REVERSE LENGTH=1596
Length=1596
Score = 693 bits (375), Expect = 0.0
Identities = 538/615 (87%), Gaps = 17/615 (3%)
Strand=Plus/Plus
Query 31 TCATCTTCCTTAACGAATGATCTCATC-ATGGAGATATTGTCGAGATTACCTTCAAAGTC 89
||||||||||||||||||||||||||| | |||||||||||||||||| | |||||||||
Sbjct 427 TCATCTTCCTTAACGAATGATCTCATCGA-GGAGATATTGTCGAGATTGCATTCAAAGTC 485
Query 90 AGTGGCGAGGTTTCGTTGCGTGTCGAAGGGATGGGCATCAATGTTTGCTAGTCCCTACTT 149
|||||| ||||||||||||||||||||| ||| |||||||||||||||||||| |||||
Sbjct 486 AGTGGCAAGGTTTCGTTGCGTGTCGAAGCAATGTGCATCAATGTTTGCTAGTCCATACTT 545
Query 150 CAAGGAGTTGTTCGTGACCAGGTCCTCCGCTAAGCCGCGTCTCTTATTCGCCATGGCAGG 209
|||| |||||||| |||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 546 CAAGAAGTTGTTCCAGACCAGGTCCTCCGCTAAGCCGAGTCTCTTATTCGCCATCGCAGA 605
Query 210 CAACGTAACCGAAGAAGATGACTATGTGTGGAGCTTCTTCTCAACGCCTCAGCTTGAGAA 269
| ||| || ||||||||| || | || | || ||||||||| ||||||||||||||||
Sbjct 606 CTACGGAATTGAAGAAGATTAC-A-GTAT-GAAATTCTTCTCATCGCCTCAGCTTGAGAA 662
Query 270 TCCATATGAGAAATCGTCACCAACTCTTGTAGCAGCCGCTGAATTTCATGTGAAGTTCTC 329
| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 663 TACATATGAGAAAACGTCGTCAACTCTTGTAGCAGCCGCTGAATTTCATGTGAAGTTCTC 722
Query 330 TCCAGAAAAGT---TACAGATATATCAT-TCTTATGACCCAAGATATTTTTCAATTGGCT 385
|||||| |||| ||| ||| |||| | ||| | |||||||||||| ||||||||||||
Sbjct 723 TCCAGACAAGTCAATACCGATCTATC-TGTCTGAAGACCCAAGATATGTTTCAATTGGCT 781
Query 386 ACGCTTCTGGCTTGATCTATATCTATGGTTGTCGATACCAGGGAAGACCTGTGATATGTA 445
|||| |||||||||||||||| |||| || |||||||| ||| |||||| | |||||||
Sbjct 782 ACGCCTCTGGCTTGATCTATAACTATTGTGGTCGATACGTGGGTAGACCTCTAATATGTA 841
Query 446 ACCCCAACACAGGACGGTATGCGATCTTACC-TGATCGTTATACTTACAGAAAGGCGTAT 504
||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||
Sbjct 842 ACCCCAACACAGGACGGTATGCGATCTTACCAT-ATCGTTATACTTATAGAAAGGCGTAT 900
Query 505 AGCTTTTTCGGGTTTGACCCCATTGACAAGCACTACAAGGTATTGTCCATGCGTTAT-TC 563
|| ||||||||||||||||| ||||||||||| ||||||| |||||| | | |||| |
Sbjct 901 AGTTTTTTCGGGTTTGACCCGATTGACAAGCAATACAAGGCCTTGTCCCTTCCTTATGT- 959
Query 564 ATG-TGGCCCTGGTCATAATAAAATTCTTACATTAGGAGATGGAGATCTCACGTGGAGAA 622
| | ||| ||||||| || |||| |||||||||| |||| ||||||||| || |||||||
Sbjct 960 A-GATGGTCCTGGTCGTAGTAAAGTTCTTACATTTGGAGCTGGAGATCTGACATGGAGAA 1018
Query 623 AGATAAAGATCTCAC 637
| || || |||||||
Sbjct 1019 ATATTAA-ATCTCAC 1032
Score = 660 bits (357), Expect = 0.0
Identities = 469/521 (90%), Gaps = 16/521 (3%)
Strand=Plus/Plus
Query 720 TGAATATGTGATAGTTTGCTTTGATGT-TCGGTCTGAGACATTCACCTATATTGGCGTAG 778
||| ||||||||||||||||||||||| | |||||||| |||||||| | ||||||||
Sbjct 1059 TGAGTATGTGATAGTTTGCTTTGATGTGAC-GTCTGAGAAATTCACCTTTGTTGGCGTAC 1117
Query 779 AAAGGTTTTGTCGATTGATCAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGGATG 838
||| |||||||| ||||||||||||||||||||| |||| |||||| |||||||||||||
Sbjct 1118 AAAAGTTTTGTCTATTGATCAACTACAAGGGCAAGTTAGATGTGATCTATTGGGAGGATG 1177
Query 839 ATGAAGACA-TCTATGAGATTTGTT-TTTATGGGAAGGATCTCGATGATTATTTGGACGA 896
||| |||| || |||||||||||| || || ||||||||||||||| |||||||||||
Sbjct 1178 ATGTCGACATTC-ATGAGATTTGTTACTT-TGCGAAGGATCTCGATGAGTATTTGGACGA 1235
Query 897 AAATC-T----C-GATGCCATTAATGAGTTGCGTGTGTGGGTTCTAGAGGATCTTGAGAA 950
||||| | | ||||||| ||| ||||||| ||||||||||||||| ||| |||||||
Sbjct 1236 AAATCTTGACGCTGATGCCACTAACGAGTTGCATGTGTGGGTTCTAGAAGATGTTGAGAA 1295
Query 951 ACAGAAATGGTCTAAATATGCCTACACTTGGACCGATGATA-AGTTCTTCCGTCGTCACC 1009
|||| |||||||||||||||||||||||||||||||||||| | ||||||| ||||||||
Sbjct 1296 ACAGGAATGGTCTAAATATGCCTACACTTGGACCGATGATACA-TTCTTCCATCGTCACC 1354
Query 1010 TTTCCATCGCTGGAGCCACTGCTTCGGGTGAAATAGTGTTTTCCATGCGCAAGTATACAT 1069
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1355 TTTCCATTGCTGGAGCCACTGCTTCGGGTGAAATAGTGTTTTCGATGCGCAAGTACACAT 1414
Query 1070 CTAAACAACCGTTTTATGTTTTTTACTTCAATCCCGAACGGAACACTCTCCAACGTGTTG 1129
|||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||||||
Sbjct 1415 CTAAACAACCATTTTATGTTTTCTACTTCAATCCCGAAAGGAATACTCTCCAACGTGTTG 1474
Query 1130 AAATCCAAGGTTTTGGCGAAGCGTTTAAGAAAACTTGTACTGTTTGCACCTTTGTAAACC 1189
|||||||||||||||| |||||||||| || |||||||| |||| |||||||||||||||
Sbjct 1475 AAATCCAAGGTTTTGGTGAAGCGTTTAGGACAACTTGTAGTGTTCGCACCTTTGTAAACC 1534
Query 1190 ACGTAGAGGATCTTGATGTTAACGATTTA-AAGCAACTCAA 1229
|| |||||||||||||||||||||||||| || ||||||||
Sbjct 1535 ACATAGAGGATCTTGATGTTAACGATTTAGAA-CAACTCAA 1574
> AT2G23160.1 | Symbols: | F-box family protein | chr2:9862470-9863744
FORWARD LENGTH=1275
Length=1275
Score = 547 bits (296), Expect = 8e-155
Identities = 991/1303 (76%), Gaps = 141/1303 (11%)
Strand=Plus/Plus
Query 22 ATGAATTCATCATCTTCCTTAACGAATGATCTCATC-ATGGAGATATTGTCGAGATTACC 80
||||||||||||||| || || ||| |||||||||| | ||||||||||||||| | ||
Sbjct 1 ATGAATTCATCATCTCCCATATCGATTGATCTCATCGCT-GAGATATTGTCGAGAGTGCC 59
Query 81 TTCAAAGTCAGTGGCGAGGTTTCGTTGCGTGTCGAAGGGATGGGCATCAATGTTTGC-TA 139
|||||||||||| || ||||||||||| ||||||||| ||||||||||||| | | |
Sbjct 60 TTCAAAGTCAGTCGCCAGGTTTCGTTGTGTGTCGAAGCCATGGGCATCAATG-ATACGTC 118
Query 140 GTCCCTACTTCAAGGAGTTGTTCGTGACCAGGTCCTCCG-CTAAGCCGCGTC-TCTTATT 197
|||| || |||| |||||||||| |||||||||| | || |||||||| | | |||||||
Sbjct 119 GTCCATATTTCACGGAGTTGTTCTTGACCAGGTCAT-CGCCTAAGCCGTG-CATCTTATT 176
Query 198 CGCCATGGCAGGCAACGTAACCGAAGAAGATGACTATGTGTGGAGCTTCTTCTCAACGCC 257
||||| | | || | | ||| | | |||||||||||||||||| |||
Sbjct 177 CGCCA---C--G----GT-A--GCAGACG--G----TGTGTGGAGCTTCTTCTCGTTGCC 218
Query 258 TCAGCTTGAGAATCCATATGAGAAA-TCGTCACCAAC-TCTTGTAGCAGC--C-GCTGAA 312
|||| | |||||||||| ||| || || | | || ||||||||| | || ||
Sbjct 219 TCAG--T----ATCCATATGA-AAAGTCCTCGTCGGCTTC-TGTAGCAGCATCAGCCAAA 270
Query 313 TTTCATGTGAAGTTCTCTCCAGAA-AAGT-TACAG-ATATATCATTCTTA-TGACCCAAG 368
||||||||||||||| ||||| || || | | | | || ||| | || ||| | | |
Sbjct 271 TTTCATGTGAAGTTCCCTCCA-AACAA-TATGC-GCATCGGTCA-TAATAGTGATCGACG 326
Query 369 ATATTTTTCAAT-TGGCTACGCTTCTGGCTTGATCTATATCTATGGTTG--TCGATACCA 425
||||||||| || ||| ||| | ||||| ||||||||| | ||||| || ||| | ||
Sbjct 327 ATATTTTTC-ATATGGTTACACCTCTGGTTTGATCTATTTATATGG-TGATTCG-T-CC- 381
Query 426 G-GGA-AGACCTGTGATATGTAACCCCAACACAGGACG-GTATGCGATCTTACCTGA-TC 481
| || ||| ||||||||||||||||| |||||||| | |||||| ||||||||| | |
Sbjct 382 GACGATAGATCTGTGATATGTAACCCCTACACAGGA-GAGTATGCAATCTTACCTTATTT 440
Query 482 GTTATAC-TTACAGAAAGGCGTATAGCTTTTTCGG-GTTTGACCCCATTGACAAGCACTA 539
| | || |||||||||| ||||||||||||| || |||||| || ||||| ||||| |
Sbjct 441 G-CA-ACGTTACAGAAAGACGTATAGCTTTTT-GGTGTTTGAACCGATTGAGAAGCAATT 497
Query 540 CAAGGTATTGTCCAT-GCGTTATTC-ATGTGGCCCTGGTCATAATAAAATTCTTACATTA 597
|||| |||||| ||| || ||| || || ||| | || || ||||||| |||||| ||
Sbjct 498 CAAGATATTGTTCATGGC-TTA-TCTATCTGGTGATCGTGATCATAAAATCCTTACAGTA 555
Query 598 GGAGA-TGGAGATCTCACGTGGAGAAAGATAAAGAT-CTCACCAGAACGACCTGAAATTG 655
||| | |||| || | | |||||||| || ||||| || | | | || ||||||||
Sbjct 556 GGA-ACTGGAAATATGAAGTGGAGAACCAT-AAGATGTTC-CTTG-A-GATATGAAATTG 610
Query 656 AGAGTGATGGGATATGCATCAATGGGGTTTTGTATTTCTTA---G---C-T--G--TGGG 704
|||||| ||| ||| ||| |||||||| ||||||| |||| | | | | ||||
Sbjct 611 TGAGTGAAGGGGTATCCATTAATGGGGTATTGTATTACTTAGGCGAAACGTCCGCTTGGG 670
Query 705 -------AG--T-TGAACTGAAGTTTGAATATGTGATAGTTTGCTTTGATGTTCGGTCTG 754
|| | ||| | |||| ||| |||| |||||||||||||||| || ||||||
Sbjct 671 ATAATAAAGATTATGATTTAAAGTATGATTATGCGATAGTTTGCTTTGATATTAGGTCTG 730
Query 755 AGACATTCACCTATATTGGCG-TAGAAAGGTTTTGTCGATTGATCAACTACAAGGGCAAA 813
| | ||||| | | || | | |||||||||||||| ||||||| ||||| ||||| |||
Sbjct 731 AAAAATTCA-TTTTTTTTGAGATAGAAAGGTTTTGTAGATTGATAAACTATAAGGGTAAA 789
Query 814 TTAGCTGTGATTTATTGGGAGGATGATGAAGACATCTATGAGAT-TTGTTTTTATGGGAA 872
||||| || ||||||| ||||||||| | || |||| | || ||| ||||| | ||
Sbjct 790 TTAGCGGTAATTTATTTCGAGGATGAT---GTCAACTATCA-ATCGTGTCTTTATCGTAA 845
Query 873 GGATCTCGATGATTATTTGGACGAAAATCTCGATGCCATTAATGAGTTGCGTGTGTGGGT 932
|| || |||| || | | || || |||||||||||| ||||| |||||||||
Sbjct 846 -GA---AGA--ATTA--TGTA-G--AACCT-GATGCCATTAATAAGTTGAATGTGTGGGT 893
Query 933 TCTAGAGGATCTTGAGAAACAGAAATGGTCTAAATATGCCTACACTTGGACCGATGATA- 991
|||||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct 894 TCTAGAGGATGTAGAGAAACAGGAATGGTAGAAATATGCCTACACTTGGACCGATGATAT 953
Query 992 AGTTC-TTC--CGTCGTCACCTTTCCATCGCT-GGA-G-CCACTGCTTCGGGTGAAATAG 1045
| ||| ||| |||||| | ||||| | ||| | | | |||||| |||||| ||||
Sbjct 954 A-TTCTTTCGTCGTCGTGAGGTTTCCGTTGCTCCAACGACTGCTGCTTGGGGTGACATAG 1012
Query 1046 TGTTTTCCATGCGCAAGTATACAT-CTAAACAACCGTTTTATGTTTTTTACTTCAATCCC 1104
| ||||| ||| | ||||||| | || |||||| ||||||||||| ||||||||||||
Sbjct 1013 TCTTTTCGATGTGTGAGTATAC-TCCTGGACAACCATTTTATGTTTTCTACTTCAATCCC 1071
Query 1105 GAACGGAACACTCTCCAACGTGTTGAAATCCAAGGTTTTGGCGAAG-CGTTTAAGAAAAC 1163
||| || ||||||||||||||||||||||||||||||||| |||| ||||| | |
Sbjct 1072 GAAAAGAGCACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAAGGCGTTT--GTA--- 1126
Query 1164 TTGTACTGTTTGCACCTTTGTAAACCACGTAGAGGATCTTGATGTTAACGATTTAAAGCA 1223
| | |||| |||||||||| || ||||||| |||||| ||||||| |||||||| |
Sbjct 1127 --G--C-GTTTACACCTTTGTAGACGACGTAGAAGATCTTAATGTTAAGGATTTAAAA-A 1180
Query 1224 -ACTCAAGTCAGTCCA-TCCTCCGTTAGTGAAGTCAGAATATT 1264
||||||| || |||| | |||| || | |||| ||||| |||
Sbjct 1181 TACTCAAGCCA-TCCAATGCTCCATTTGAGAAGACAGAAGATT 1222
> AT1G47300.1 | Symbols: | F-box family protein | chr1:17339561-17340972
REVERSE LENGTH=921
Length=921
Score = 63.9 bits (34), Expect = 4e-09
Identities = 38/40 (95%), Gaps = 0/40 (0%)
Strand=Plus/Plus
Query 1110 GAACACTCTCCAACGTGTTGAAATCCAAGGTTTTGGCGAA 1149
||||||| |||||||||||||||||||||||||||| |||
Sbjct 585 GAACACTATCCAACGTGTTGAAATCCAAGGTTTTGGAGAA 624
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 64708502505
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5