BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg936065
Length=1293
Score E
Sequences producing significant alignments: (Bits) Value
AT2G02660.1 | Symbols: | F-box associated ubiquitination effec... 1539 0.0
AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6... 1184 0.0
AT2G16450.1 | Symbols: | F-box and associated interaction doma... 1114 0.0
AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-84... 693 0.0
AT2G23160.1 | Symbols: | F-box family protein | chr2:9862470-9... 503 2e-141
AT2G16220.1 | Symbols: | F-box and associated interaction doma... 473 1e-132
AT3G56890.1 | Symbols: | F-box associated ubiquitination effec... 124 2e-27
AT5G38810.1 | Symbols: | F-box and associated interaction doma... 78.7 1e-13
AT1G30945.1 | Symbols: | pseudogene, hypothetical protein | ch... 71.3 2e-11
AT1G47300.1 | Symbols: | F-box family protein | chr1:17339561-... 63.9 4e-09
AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-... 60.2 5e-08
AT1G30935.1 | Symbols: | pseudogene, F-box protein family, con... 58.4 2e-07
AT1G31080.1 | Symbols: | F-box family protein | chr1:11091832-... 58.4 2e-07
> AT2G02660.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr2:738504-739769 FORWARD LENGTH=1266
Length=1266
Score = 1539 bits (833), Expect = 0.0
Identities = 1058/1164 (91%), Gaps = 25/1164 (2%)
Strand=Plus/Plus
Query 63 CATACTTCAACG-AGTTGTTCCAGACCAGGTCCTCCGCTAAGCCGCGTCTCTTATTCGCC 121
|||||||| | | |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 77 CATACTTC-AGGAAGTTGTTCCAGACCAGGTCCTCCGCTAAGCCGAGTCTCTTATTCGCC 135
Query 122 AT--C-G-C-A--GAA--GAAGATGACT-GTGTGTGGAGCTTCTTCTCAACGCCTCAGCT 171
|| | | | | ||| ||||| || | || | || ||||||||| ||||||||||
Sbjct 136 ATCGCAGACTACGGAATTGAAGAAGATTACAGTAT-GAAATTCTTCTCATCGCCTCAGCT 194
Query 172 TGAGAATACATATGAGAAATCGTCGTCGACTCTTGTAGCAGCCGCTGAGTTTCATATGAA 231
||||||| ||||||||||||||||| | |||||||||||||||||||| |||||| ||||
Sbjct 195 TGAGAATCCATATGAGAAATCGTCGCCAACTCTTGTAGCAGCCGCTGAATTTCATGTGAA 254
Query 232 GTTATCTCCAGACAAGTTAATAGGGATTTATCATTCTTACGACCCAAGATATTTTTCAAT 291
||| |||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 255 GTTCTCTCCAGACAAGTTAATACCAATCAATCATTCTTACGACCCAAGATATTTTTCAAT 314
Query 292 TGGCTACGCCTCTGGCTTGATCTATATGTATGGTGATCGATACATGGCTAGACCTCTGAT 351
||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||| ||
Sbjct 315 TGGCTACGCCTCTGGCTTGATATATATCTATGGTGATCGATACGTGGCTAGACCTCTAAT 374
Query 352 ATGTAACCCCAACACAGGACGATATGTGATCTTACCTAATCGGTATACTTACAGAAAGGC 411
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 375 ATGTAACCCCAACACAGGACGGTATGTGATCTTACCTAATCGGTATACTTACAGAAAGGC 434
Query 412 GTATAGCTTTTTCGGGTTTGACCCAATTGACAAGCAATACAAGGTATTGTCCA-TGCGTT 470
|||||||||||||||||||||||| |||| |||||||||||||| |||||||| ||| ||
Sbjct 435 GTATAGCTTTTTCGGGTTTGACCCGATTGGCAAGCAATACAAGGCATTGTCCATTGC-TT 493
Query 471 ATCCATCTGGTCCTGGTCATAATAAAATACTTACATTAGGAGATGGAGATCTGACATGGA 530
||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 494 ATCCATCTGATCCTGGTCGTCATAAAATACTTACATTAGGAGATGGAGATCTGACATGGA 553
Query 531 GAAAGATAAAATGTCCCTTACCACAACCTGGTATTAAGAGTGATGGGATATGCATCAATG 590
||||||| ||||||||| |||||| ||||||||||||| |||||||||||||||||||||
Sbjct 554 GAAAGATCAAATGTCCCGTACCACGACCTGGTATTAAGGGTGATGGGATATGCATCAATG 613
Query 591 GGGTTTTGTATTTCTTAGCTGTGAGAGTTGAATGCT--CGTTTGAATATGTGATAGTTTG 648
||||||||||||||||||||| |||| || | ||| || ||| ||||||||||||||
Sbjct 614 GGGTTTTGTATTTCTTAGCTGAGAGAAATG-A-GCTAGAGTCTGATTATGTGATAGTTTG 671
Query 649 CTTTGATGTTAGGTCTGAGAAATTCACATATATTGACGTAGAGAGGATTTGTCAATTGAT 708
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 672 CTTTGATGTTAGGTCTGAGAAATTCACATATATTGACGTAGAGAGGATTTGTCGATTGAT 731
Query 709 CAACTACAATGGCAAATTAGCTGTGATTTATTGGGAGGATGATGTCGACATTTATGAGAT 768
|||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 732 AAACTACAAGGGCAAATTAGCTATGATTTATTGGGAGGATGATGTCGACATTTATGAGAT 791
Query 769 TTGTTAT-TA--TGGGAAGAATCTCGATGATTATTTGGAGAAAAATCTCAACGTTGATGC 825
| | || | |||||||||||| ||| | ||||||||| |||||||| | ||||||||
Sbjct 792 TAATCATATGGCTGGGAAGAATCTTGATAAGTATTTGGAGGAAAATCTCGATGTTGATGC 851
Query 826 CACTAATGAGTTGCGTGTGTGGGTTCTAGAGGATGTTGAGAAACATGAATGGTCGAAATA 885
|||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 852 CACTAATGAGTTGCATGTGTGGGTTCTAGAGGATGTTGAGAAACAGGAATGGTCTAAATA 911
Query 886 TGCCTACACTTGGACCGATGATACATTCTTCCGTCGTCATGTTTCCATCGCTGGAGCGAC 945
||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||
Sbjct 912 TGCCTACACTTGGACCGATGATACATTCTTCCGTCGTCACCTTTCCATTGCTGGAGCCAC 971
Query 946 TGCTTCGGGTGAAATAGTATTTTCGATGCGCAAGTATTCATCTAAACAACCGTTTTATGT 1005
|| ||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||
Sbjct 972 TGTTTCGGGTGAAATAGTGTTTTCGATACGCAAGTACACATCTAAACAACCGTTTTATGT 1031
Query 1006 TTTCTACTTCAATCCCGAAAGGAACACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGA 1065
||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||
Sbjct 1032 TTTCTACTTCAATCCCGAATCGAACACTCTCCAACGTGTAGAAACCCAAGGTTTTGGTGA 1091
Query 1066 AGCGTTTAAG--A-AAACTTGTAGCGTTCGCACCTTTGTAAACCACGTAGAGGATCTTGA 1122
||| |||||| | |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1092 AGCATTTAAGGCAGAAACTTGTAGCGTTCGCACCTTTGTAAACCACGTAGAGAATCTTGA 1151
Query 1123 TGTTAACGATTTAAAACAACTCAAGTCAGTCCATCCTCCATTGGTGAAGCCAGAATTTTA 1182
||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||
Sbjct 1152 TGTTAACGATTTAAAACAACTCAAGTCAGGCCATCCTCCATTGGTGCAGCCAGAAAATTA 1211
Query 1183 TTGTCTACCAGAATCAGAATCAGA 1206
||||||| |||| ||||| |||||
Sbjct 1212 TTGTCTATCAGACTCAGATTCAGA 1235
> AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6818205
REVERSE LENGTH=1414
Length=1414
Score = 1184 bits (641), Expect = 0.0
Identities = 998/1161 (86%), Gaps = 61/1161 (5%)
Strand=Plus/Plus
Query 63 CATACTTCAACGAGTTGTTCCAGACCAGGTCCTCCGCTAAGCCGCGTCTCTTATTCGCCA 122
|||| ||||| |||||||||| ||||||||||||| |||||||||| |||||||||||||
Sbjct 252 CATATTTCAAGGAGTTGTTCCTGACCAGGTCCTCCACTAAGCCGCGCCTCTTATTCGCCA 311
Query 123 TCGC--AG-AAG--AA-G-A-TG----ACTGTGTGTGGAGCTTCTTCTCAACGCCTCAGC 170
| || || ||| || | | | ||||||||||||| |||||||| ||||| ||||
Sbjct 312 TGGCAGAGAAAGTCAACGAAGAGAAAAACTGTGTGTGGAGGTTCTTCTCGACGCCACAGC 371
Query 171 TTGAGAATACATATGAGAAATCGTCGTCGACTCTTGTAGCAGCCGCTGAGTTTCATATGA 230
|||||||| ||||||||||||| || ||||||||||||||||||||||| |||||| | |
Sbjct 372 TTGAGAATCCATATGAGAAATCCTCATCGACTCTTGTAGCAGCCGCTGAATTTCATGTTA 431
Query 231 AGTTATCTCCAGACAAGTTAATAGGGATTTATCATTCTTACGACCCAAGATATTTTTCAA 290
|||| |||||||||||| | ||| || | ||||| ||| |||| || |||||||||||
Sbjct 432 AGTTCTCTCCAGACAAGCT-ATA--TATCTGTCATTGTTATGACCTAAAATATTTTTCAA 488
Query 291 TTGGCTACGCCTCTGGCTTGATCTATATGTATGGTGATCGATAC-ATGGCTAGACCTCTG 349
||||||||||||| || ||||||||| | |||||||||||| | | ||||| ||||||
Sbjct 489 TTGGCTACGCCTCGGGGTTGATCTATTTATATGGTGATCGAGGCGA-GGCTACACCTCTA 547
Query 350 ATATGTAACCCCAAC-ACAGGACGATATGTGATCTTACCTAATCGGTATACTTACAGAAA 408
|||||||||||| || |||||||| |||| |||||||||||||||||||||||||||||
Sbjct 548 ATATGTAACCCC-ACTACAGGACGGTATGCCATCTTACCTAATCGGTATACTTACAGAAA 606
Query 409 GGCGTATAGCTTTTTCGGGTTTGACCCAATTGACAAGCAATACAAGGTATTGTCCATGCG 468
|||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||
Sbjct 607 GGCGTATAGCTTTTTCGGATTTGACCCGATTGACAAGCAATACAAGGCATTGTCCATATT 666
Query 469 TTATCCATCTGGTCCTGGTCATAATAAAATACTTACATTAGGAGATGGAGATCTGACA-T 527
||||||||||||||||||||||| |||||| |||||||| || | |||| || ||| | |
Sbjct 667 TTATCCATCTGGTCCTGGTCATAGTAAAATTCTTACATTTGGGGCTGGACATATGA-AGT 725
Query 528 GGAGAAAGATAAAATGTCCCTTAC-----CACA-ACCTGGTATTAAGAGTGATGGGATAT 581
||||||||||||| |||||||||| | | || || |||||||||||| |||||||
Sbjct 726 GGAGAAAGATAAATTGTCCCTTACGATATGATAGACATGATATTAAGAGTGAAGGGATAT 785
Query 582 GCATCAATGGGGTTTTGTATTTC-T---TAGC-TGT--GA--GAGTT---GA-----AT- 623
|||||||||| |||||||||| | | |||| || || | ||| || ||
Sbjct 786 GCATCAATGGAGTTTTGTATTACTTAGGTAGCACGTCGGATTGTGTTAAGGATGGTCATG 845
Query 624 GC-TCGT-T-TGAATATGTGATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCACATATA 680
|| | || | ||| ||||||||||||||||||||| ||||||||||||||||||| | ||
Sbjct 846 GCATAGTATCTGATTATGTGATAGTTTGCTTTGATATTAGGTCTGAGAAATTCACGTTTA 905
Query 681 TTGACGTAGAGAGGATTTGTCAATTGATCAACTACAATGGCAAATTAGCTGTGATTTATT 740
|||||||||| ||| |||||| |||||||||||| || || |||||||||||||||||||
Sbjct 906 TTGACGTAGAAAGGTTTTGTCGATTGATCAACTATAAGGGAAAATTAGCTGTGATTTATT 965
Query 741 GGGAGGATGATGTCGACATTTATGAGATTTGTTATTATGGGAAGAATCTCGATGATTATT 800
||||||||||||||||||||||| | | | ||||||| | | || |||| || |||
Sbjct 966 GGGAGGATGATGTCGACATTTAT-A-AGCT-TTATTATTCG--G-ATGTCGACGAATATG 1019
Query 801 TGGAGAAAAATCTCAACGTTGATGCCACTAATGAGTTGCGTGTGTGGGTTCTAGAGGATG 860
||||| | ||| | |||| ||||| || ||||||||||||||||||||||||||||||||
Sbjct 1020 TGGAGTATAATATTAACGATGATGACATTAATGAGTTGCGTGTGTGGGTTCTAGAGGATG 1079
Query 861 TTGAGAAACATG-AATGGTCGAAATATGCCTACACTTGGACCGATGATACATTCTTCCGT 919
|| ||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1080 TTAAGAAACA-GCAATGGTCGAAATATGCCTACACTTGGACCGATGATAGATTCTTCCGT 1138
Query 920 CGTCATGTTTCCATCGCTGGAGCGACTGCTTCGGGTGAAATAGTATTTTCGATGCGCAAG 979
|||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| |||
Sbjct 1139 CGTCGTGTTTCCATCGCTGGAGGGACTGCTTCGGGTGAAATAGTGTTTTCGATGCTCAAA 1198
Query 980 TATTCATCTAAACAACCGTTTTATGTTTTCTACTTCAATCCCGAAAGGAACACTCTCCAA 1039
||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 TATACACCTAAGCAACCGTTTTATGTTTTCTACTTCAATCCCGAAAGGAACACTCTCCAA 1258
Query 1040 CGTGTTGAAATCCAAGGTTTTGGTGAAGCGTTTAAGAAAACTTGTAGCGTTCGCACCTTT 1099
|||||||||||||||||||||||||||| ||| |||||||||||||| ||| ||||||||
Sbjct 1259 CGTGTTGAAATCCAAGGTTTTGGTGAAGTGTTAAAGAAAACTTGTAGAGTTTGCACCTTT 1318
Query 1100 GTAAACCACGTAGAGGATCTTGATGTTAACGA-TTTAAAACAACTCAAGTCAGTCCATCC 1158
||||||||||||||||||||| ||||| |||| |||||| ||||||||||||||||||||
Sbjct 1319 GTAAACCACGTAGAGGATCTTAATGTTCACGACTTTAAA-CAACTCAAGTCAGTCCATCC 1377
Query 1159 TCCATTGGTG-A--AGCCAGA 1176
||||||||| | |||||||
Sbjct 1378 CCCATTGGTGGATGAGCCAGA 1398
> AT2G16450.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:7131520-7132803 REVERSE LENGTH=1284
Length=1284
Score = 1114 bits (603), Expect = 0.0
Identities = 996/1174 (85%), Gaps = 73/1174 (6%)
Strand=Plus/Plus
Query 63 CATACTTCAACGAGTTGTTCCAGACCAGGTCCTCCG-CTAAGCCGCGTCTCTTATTCGCC 121
|||| ||||| |||||||||| ||||||||||| || |||||||||| ||||||||||||
Sbjct 119 CATATTTCAAGGAGTTGTTCCTGACCAGGTCCT-CGACTAAGCCGCGCCTCTTATTCGCC 177
Query 122 ATCGC--AG-AA-G------A-AG-ATGACTGTGTGTGGAGCTTCTTCTCAACGCCTCAG 169
||||| || || | | || | |||||||||||||| |||||||| |||| |||
Sbjct 178 ATCGCAGAGAAAGGCAACAAAGAGAAAGACTGTGTGTGGAGGTTCTTCTCGTCGCCACAG 237
Query 170 CTTGAGAATACATATGAGAAATCGTCGTCGACTCTTGTAGCAGCCGCTGAGTTTCATATG 229
||||||||| ||||||||||||| || ||||||||||||||| ||||||| |||||| ||
Sbjct 238 CTTGAGAATCCATATGAGAAATCCTCATCGACTCTTGTAGCAACCGCTGAATTTCATGTG 297
Query 230 AAG-TTATCTCCAGACAAGTTAATAGGGATTTATCATTCTTACGACCCAAGATATTTTTC 288
|| || ||||||||||| | || ||| | ||||| ||| |||| || |||||||||
Sbjct 298 -AGATTCTCTCCAGACAA--T-CTACTGATCTGTCATTATTATGACCTAAAATATTTTTC 353
Query 289 AATTGGCTACGCCTCTGGCTTGATCTATATGTATGGTGATCGATACATGGCTAGACCTCT 348
|||||| || |||| ||||||||||||||| |||||| ||||| | ||||||||||||
Sbjct 354 AATTGGTTATGCCTTTGGCTTGATCTATATCTATGGTAATCGAGGCCGGGCTAGACCTCT 413
Query 349 GATATGTAACCCCAAC-ACAGGACGATATGTGATCTTACCTAATCGGTATACTTACAGAA 407
|||||||||||| || |||||||| |||| ||||||||||||||||||||||||||||
Sbjct 414 AATATGTAACCCC-ACTACAGGACGGTATGCCATCTTACCTAATCGGTATACTTACAGAA 472
Query 408 AGGCGTATAGCTTTTTCGGGTTTGACCCAATTGACAAGCAATACAAGGTATTGTCCATGC 467
|||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 473 AGGCGTTTAGCTTTTTCGGGTTTGACCCAATTGACAAGCAATACAAGGCATTGTCCATG- 531
Query 468 G-TTATCCATCTGGTCCTGGTCATAATA-AAATACTTACATTAGGAGATGGAGATCTGAC 525
| ||||||||||||||||||||||| || | || ||||||| |||| |||||||||||
Sbjct 532 GTTTATCCATCTGGTCCTGGTCATAGTAGAGTTA-TTACATTTGGAGCTGGAGATCTGA- 589
Query 526 A-TGGAGAAAGATAAAATGTCCCTTACCACAACCTGGTATTAAGAGTGATGGGATATGCA 584
| ||||||| |||||||||| | || | || | || |||||||||||| ||| |||| |
Sbjct 590 AGTGGAGAAGGATAAAATGTTCATTGCGAC-A--TGATATTAAGAGTGAAGGGGTATGTA 646
Query 585 TCAATGGGGTTTTGTATTTCTTA---G---C-T--G--T-GA---GAG-T--T-G-AAT- 623
|||||||||||||||||| |||| | | | | | || | | | | | |||
Sbjct 647 TCAATGGGGTTTTGTATTACTTAGGTGACACGTCGGATTGGAGTCGCGTTAATGGTAATC 706
Query 624 GC-T--CGTTTGAATATGTGATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCACATATA 680
| | ||| || ||| |||||||||||||||||||||||||||| |||||||| | ||
Sbjct 707 ACGTAACGTCTGGTTATATGATAGTTTGCTTTGATGTTAGGTCTGAAAAATTCACCTTTA 766
Query 681 TTGACGTAGAGAGGATTTGTCAATTGATCAACTACAATGGCAAATTAGCTGTGATTTATT 740
|||||||| | ||| |||||| |||||| |||||||| ||||||||||||||||||||||
Sbjct 767 TTGACGTAAAAAGGTTTTGTCGATTGATAAACTACAAGGGCAAATTAGCTGTGATTTATT 826
Query 741 GGGAGGATGATGTCGACATTTATGAGATTTGTTATTAT--GGG-A-AGAATCTCGATGAT 796
|||||||||||||||||||| | ||| ||| ||| | ||| | ||| | |||| ||
Sbjct 827 GGGAGGATGATGTCGACATTCAAGAGCTTTATTACAAAAAGGGTATAGA-TGTCGAGGAA 885
Query 797 TATTTGGAGAAAAATCTCAACGTTGATGCCACTAATGAGTTGCGTGTGTGGGTTCTAGAG 856
||| ||||||| ||| |||||| ||||||||||||||||||| |||||||| |||||| |
Sbjct 886 TATGTGGAGAATAATGTCAACGCTGATGCCACTAATGAGTTGTGTGTGTGGATTCTAGCG 945
Query 857 GATGTTGAGAAACATGAATGGTCGAAATATGCCTACACTTGGACCGATGATACA-TTCTT 915
|||||||||||||| |||||||||||| |||||||||||||||||||||| | | |||||
Sbjct 946 GATGTTGAGAAACAGGAATGGTCGAAACATGCCTACACTTGGACCGATGAAA-AGTTCTT 1004
Query 916 CCGTCGTCATGTT-TCCATCGCTGGAGCGACTGCTTCGGGTGAAATAGTATTTTCGATGC 974
||||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 1005 CCGTCGTT-TGGTATCCATCGCTGGAGTGACTGCTTCGGGTGAAATAGTGTTTTCGATGC 1063
Query 975 GCAAGTATTCATC-TAAACAACCGTTTTATGT-TTTCTACTTCAATCCCGAAAGGAACAC 1032
|||||| | ||| |||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct 1064 GCAAGTGTA-ATCCTAAACAACCGTTTTATGTGTTT-TACTTCAATCCCGAAAGGAACAG 1121
Query 1033 TCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAAGC-GTTTAAGAAAACTTGT-AGCGTT 1090
|||||||||||||||||| ||||||||||||||||| ||| | |||| ||||| | ||||
Sbjct 1122 TCTCCAACGTGTTGAAATTCAAGGTTTTGGTGAAGCCGTT-ACGAAATCTTGTGA-CGTT 1179
Query 1091 CGCACCTTTGTAAACCACGTAGAGGATCTTGATGTTAACGATTTAAAACAACTCAAGTCA 1150
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 1180 TGCACCTTTGTAAACCACGTAGAGGATCTCAATGTTTACGATTTAAAACAACTCAAGTCA 1239
Query 1151 GTCCATCCTCCATTGGT-GAAGCCAGAATTTTAT 1183
||||||||||||||||| || |||||||| ||||
Sbjct 1240 GTCCATCCTCCATTGGTCGA-GCCAGAATATTAT 1272
> AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-846616
REVERSE LENGTH=1596
Length=1596
Score = 693 bits (375), Expect = 0.0
Identities = 471/518 (91%), Gaps = 4/518 (1%)
Strand=Plus/Plus
Query 631 TGAATATGTGATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCACATATATTGACGTAGA 690
||| ||||||||||||||||||||||| | ||||||||||||||| | | ||| |||| |
Sbjct 1059 TGAGTATGTGATAGTTTGCTTTGATGTGACGTCTGAGAAATTCACCTTTGTTGGCGTACA 1118
Query 691 GAGGATTTGTCAATTGATCAACTACAATGGCAAATTAGCTGTGATTTATTGGGAGGATGA 750
| | |||||| ||||||||||||||| ||||| |||| |||||| ||||||||||||||
Sbjct 1119 AAAGTTTTGTCTATTGATCAACTACAAGGGCAAGTTAGATGTGATCTATTGGGAGGATGA 1178
Query 751 TGTCGACATTTATGAGATTTGTTA-TTATGGGAAGAATCTCGATGATTATTTGGA-GAAA 808
|||||||||| ||||||||||||| || || |||| |||||||||| |||||||| | ||
Sbjct 1179 TGTCGACATTCATGAGATTTGTTACTT-TGCGAAGGATCTCGATGAGTATTTGGACG-AA 1236
Query 809 AATCTCAACGTTGATGCCACTAATGAGTTGCGTGTGTGGGTTCTAGAGGATGTTGAGAAA 868
||||| ||| |||||||||||| ||||||| ||||||||||||||| ||||||||||||
Sbjct 1237 AATCTTGACGCTGATGCCACTAACGAGTTGCATGTGTGGGTTCTAGAAGATGTTGAGAAA 1296
Query 869 CATGAATGGTCGAAATATGCCTACACTTGGACCGATGATACATTCTTCCGTCGTCATGTT 928
|| |||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 1297 CAGGAATGGTCTAAATATGCCTACACTTGGACCGATGATACATTCTTCCATCGTCACCTT 1356
Query 929 TCCATCGCTGGAGCGACTGCTTCGGGTGAAATAGTATTTTCGATGCGCAAGTATTCATCT 988
||||| |||||||| |||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 1357 TCCATTGCTGGAGCCACTGCTTCGGGTGAAATAGTGTTTTCGATGCGCAAGTACACATCT 1416
Query 989 AAACAACCGTTTTATGTTTTCTACTTCAATCCCGAAAGGAACACTCTCCAACGTGTTGAA 1048
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1417 AAACAACCATTTTATGTTTTCTACTTCAATCCCGAAAGGAATACTCTCCAACGTGTTGAA 1476
Query 1049 ATCCAAGGTTTTGGTGAAGCGTTTAAGAAAACTTGTAGCGTTCGCACCTTTGTAAACCAC 1108
||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||
Sbjct 1477 ATCCAAGGTTTTGGTGAAGCGTTTAGGACAACTTGTAGTGTTCGCACCTTTGTAAACCAC 1536
Query 1109 GTAGAGGATCTTGATGTTAACGATTTAAAACAACTCAA 1146
|||||||||||||||||||||||||| ||||||||||
Sbjct 1537 ATAGAGGATCTTGATGTTAACGATTTAGAACAACTCAA 1574
Score = 518 bits (280), Expect = 7e-146
Identities = 425/493 (86%), Gaps = 17/493 (3%)
Strand=Plus/Plus
Query 63 CATACTTCAACG-AGTTGTTCCAGACCAGGTCCTCCGCTAAGCCGCGTCTCTTATTCGCC 121
|||||||||| | |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 539 CATACTTCAA-GAAGTTGTTCCAGACCAGGTCCTCCGCTAAGCCGAGTCTCTTATTCGCC 597
Query 122 AT--C-G-C-A--GAA--GAAGATGACT-GTGTGTGGAGCTTCTTCTCAACGCCTCAGCT 171
|| | | | | ||| ||||| || | || | || ||||||||| ||||||||||
Sbjct 598 ATCGCAGACTACGGAATTGAAGAAGATTACAGTAT-GAAATTCTTCTCATCGCCTCAGCT 656
Query 172 TGAGAATACATATGAGAAATCGTCGTCGACTCTTGTAGCAGCCGCTGAGTTTCATATGAA 231
||||||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||
Sbjct 657 TGAGAATACATATGAGAAAACGTCGTCAACTCTTGTAGCAGCCGCTGAATTTCATGTGAA 716
Query 232 GTTATCTCCAGACAAGTTAATAGGGATTTATCAT-TCTTACGACCCAAGATATTTTTCAA 290
||| ||||||||||||| |||| ||| |||| | ||| | |||||||||||| ||||||
Sbjct 717 GTTCTCTCCAGACAAGTCAATACCGATCTATC-TGTCTGAAGACCCAAGATATGTTTCAA 775
Query 291 TTGGCTACGCCTCTGGCTTGATCTATATGTATGGTGATCGATACATGGCTAGACCTCTGA 350
||||||||||||||||||||||||||| ||| ||| ||||||| ||| ||||||||| |
Sbjct 776 TTGGCTACGCCTCTGGCTTGATCTATAACTATTGTGGTCGATACGTGGGTAGACCTCTAA 835
Query 351 TATGTAACCCCAACACAGGACGATATGTGATCTTACC-TAATCGGTATACTTACAGAAAG 409
|||||||||||||||||||||| |||| ||||||||| || ||| |||||||| ||||||
Sbjct 836 TATGTAACCCCAACACAGGACGGTATGCGATCTTACCATA-TCGTTATACTTATAGAAAG 894
Query 410 GCGTATAGCTTTTTCGGGTTTGACCCAATTGACAAGCAATACAAGGTATTGTCCATGCGT 469
|||||||| ||||||||||||||||| ||||||||||||||||||| |||||| | | |
Sbjct 895 GCGTATAGTTTTTTCGGGTTTGACCCGATTGACAAGCAATACAAGGCCTTGTCCCTTCCT 954
Query 470 TATCCATCTGGTCCTGGTCATAATAAAATACTTACATTAGGAGATGGAGATCTGACATGG 529
||| | ||||||||||| || |||| | |||||||| |||| ||||||||||||||||
Sbjct 955 TATGTAGATGGTCCTGGTCGTAGTAAAGTTCTTACATTTGGAGCTGGAGATCTGACATGG 1014
Query 530 AGAAAGATAAAAT 542
||||| || ||||
Sbjct 1015 AGAAATATTAAAT 1027
> AT2G23160.1 | Symbols: | F-box family protein | chr2:9862470-9863744
FORWARD LENGTH=1275
Length=1275
Score = 503 bits (272), Expect = 2e-141
Identities = 891/1169 (76%), Gaps = 126/1169 (11%)
Strand=Plus/Plus
Query 63 CATACTTCAAC-GAGTTGTTCCAGACCAGGTCCTCCG-CTAAGCCGCGTC-TCTTATTCG 119
|||| ||| || ||||||||| ||||||||| | || |||||||| | | |||||||||
Sbjct 122 CATATTTC-ACGGAGTTGTTCTTGACCAGGTCAT-CGCCTAAGCCGTG-CATCTTATTCG 178
Query 120 CCATCGCAGAAGAAGATGACTGTGTGTGGAGCTTCTTCTCAACGCCTCAGCTTGAGAATA 179
||| || | || | ||| ||||||||||||||||||| ||||||| | ||
Sbjct 179 CCA-CG--GTAG--CA-GACGGTGTGTGGAGCTTCTTCTCGTTGCCTCAG--T----ATC 226
Query 180 CATATGAGAAA-TCGTCGTCGAC-TCTTGTAGCAGC--C-GCTGAGTTTCATATGAAGTT 234
||||||| ||| || |||||| | || ||||||||| | || | |||||| |||||||
Sbjct 227 CATATGA-AAAGTCCTCGTCGGCTTC-TGTAGCAGCATCAGCCAAATTTCATGTGAAGTT 284
Query 235 ATCTCCAGACAAGTTAATAG-GGATTTATCATTCTTA-CGACCCAAGATATTTTTCAAT- 291
||||| |||| | || | | || ||| | || || | | |||||||||| ||
Sbjct 285 CCCTCCAAACAA--T-AT-GCGCATCGGTCA-TAATAGTGATCGACGATATTTTTC-ATA 338
Query 292 TGGCTACGCCTCTGGCTTGATCTATATGTATGGTGA-TCGATAC-ATGGCTAGACCTCTG 349
||| ||| ||||||| ||||||||| | |||||||| ||| | | | | |||| || ||
Sbjct 339 TGGTTACACCTCTGGTTTGATCTATTTATATGGTGATTCG-TCCGA-CGATAGATCTGTG 396
Query 350 ATATGTAACCCCAACACAGGACGA-TATGTGATCTTACCTAATCGGTATAC-TTACAGAA 407
|||||||||||| |||||||| || |||| ||||||||| || | | || ||||||||
Sbjct 397 ATATGTAACCCCTACACAGGA-GAGTATGCAATCTTACCTTATTTGCA-ACGTTACAGAA 454
Query 408 AGGCGTATAGCTTTTTCGG-GTTTGACCCAATTGACAAGCAATACAAGGTATTGTCCAT- 465
|| ||||||||||||| || |||||| || ||||| ||||||| |||| |||||| |||
Sbjct 455 AGACGTATAGCTTTTT-GGTGTTTGAACCGATTGAGAAGCAATTCAAGATATTGTTCATG 513
Query 466 GCGTTATCCATCTGGTCCTGGTCATAATAAAATACTTACATTAGGAGA-TGGAGATCTGA 524
|| ||||| ||||||| | || || ||||||| |||||| ||||| | |||| || |||
Sbjct 514 GC-TTATCTATCTGGTGATCGTGATCATAAAATCCTTACAGTAGGA-ACTGGAAATATGA 571
Query 525 CA-TGGAGAAAGATAAAATGTCCCTTACCACAACCTGGTATTAAGAGTGATGGGATATGC 583
| ||||||| |||| |||| |||| | | || ||| |||||| ||| ||| |
Sbjct 572 -AGTGGAGAACCATAAGATGTTCCTT--GA-GATATGAAATTGTGAGTGAAGGGGTATCC 627
Query 584 ATCAATGGGGTTTTGTATTTCTTA---G---C-T--G--T--GAGAGT--TGA--ATG-- 624
|| |||||||| ||||||| |||| | | | | | || | | || |||
Sbjct 628 ATTAATGGGGTATTGTATTACTTAGGCGAAACGTCCGCTTGGGATAATAAAGATTATGAT 687
Query 625 CT--CGTTTGAATATGTGATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCACATATATT 682
| || ||| |||| |||||||||||||||| |||||||||| ||||||| | | ||
Sbjct 688 TTAAAGTATGATTATGCGATAGTTTGCTTTGATATTAGGTCTGAAAAATTCATTTTTTTT 747
Query 683 GACG-TAGAGAGGATTTGTCA-ATTGATCAACTACAATGGCAAATTAGCTGTGATTTATT 740
|| | |||| ||| ||||| | |||||| ||||| || || |||||||| || |||||||
Sbjct 748 GA-GATAGAAAGGTTTTGT-AGATTGATAAACTATAAGGGTAAATTAGCGGTAATTTATT 805
Query 741 GGGAGGATGATGTCGACATTTATGAGAT-TTGT-TATTATGGGAAGAATCTCGATGATTA 798
|||||||||||| | | ||| | || ||| | |||| | ||||| || ||||
Sbjct 806 TCGAGGATGATGTC-A-A-CTATCA-ATCGTGTCT-TTATCGTAAGAA----GA--ATTA 854
Query 799 TTTGGAGAAAAATCTCAACGTTGATGCCACTAATGAGTTGCGTGTGTGGGTTCTAGAGGA 858
|| || || | | |||||||| |||| ||||| ||||||||||||||||||
Sbjct 855 --TGTAG---AA---C--C--TGATGCCATTAATAAGTTGAATGTGTGGGTTCTAGAGGA 902
Query 859 TGTTGAGAAACATGAATGGTCGAAATATGCCTACACTTGGACCGATGATACATTC-TTC- 916
||| |||||||| ||||||| ||||||||||||||||||||||||||||| |||| |||
Sbjct 903 TGTAGAGAAACAGGAATGGTAGAAATATGCCTACACTTGGACCGATGATATATTCTTTCG 962
Query 917 -CGTCGTCATGTTTCCATCGCTGGAGCGA---CTGCTTCGGGTGAAATAGTATTTTCGAT 972
|||||| | |||||| | ||| | ||| |||||| |||||| ||||| ||||||||
Sbjct 963 TCGTCGTGAGGTTTCCGTTGCTCCAACGACTGCTGCTTGGGGTGACATAGTCTTTTCGAT 1022
Query 973 GCGCAAGTATTCAT-CTAAACAACCGTTTTATGTTTTCTACTTCAATCCCGAAAGGAACA 1031
| | ||||| | | || |||||| |||||||||||||||||||||||||||| || ||
Sbjct 1023 GTGTGAGTATAC-TCCTGGACAACCATTTTATGTTTTCTACTTCAATCCCGAAAAGAGCA 1081
Query 1032 CTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAAG-CGTTTAAGAAAACTTGTAGCGTT 1090
|||||||||||||||||||||||||||||||||||| ||||| | | ||||||
Sbjct 1082 CTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAAGGCGTTT--G-----T---AGCGTT 1131
Query 1091 CGCACCTTTGTAAACCACGTAGAGGATCTTGATGTTAACGATTTAAAACA-ACTCAAGTC 1149
|||||||||| || ||||||| |||||| ||||||| ||||||||| | ||||||| |
Sbjct 1132 TACACCTTTGTAGACGACGTAGAAGATCTTAATGTTAAGGATTTAAAA-ATACTCAAGCC 1190
Query 1150 AGTCCA-TCCTCCATTGGTGAAGCCAGAA 1177
| |||| | ||||||| | |||| |||||
Sbjct 1191 A-TCCAATGCTCCATTTGAGAAGACAGAA 1218
> AT2G16220.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr2:7030155-7031378 REVERSE LENGTH=1224
Length=1224
Score = 473 bits (256), Expect = 1e-132
Identities = 571/713 (80%), Gaps = 61/713 (9%)
Strand=Plus/Plus
Query 63 CATACTTCAACGAGTTGTTCCAGACCAGGTCCTCCGCTAAGCCGCGTCTCTTATTCGCCA 122
|||| ||||| |||||||||| |||||| ||||| |||||||| || |||||||| ||||
Sbjct 119 CATATTTCAAAGAGTTGTTCCTGACCAGATCCTCTGCTAAGCCACGCCTCTTATTTGCCA 178
Query 123 TCGCAGAAGAAGATGACTGTGTGTGGAGCTTCTTCTCAACGCCTCAGCTTGAGAATACAT 182
| | | | || | || |||||||||| ||||| || | ||| || | | | |
Sbjct 179 T--C-GTACAA-A--ACGGTGTGTGGAGATTCTTTTC-A--TCTC--CTCG-G--T---T 221
Query 183 ATGAGAAATCGTCGTCGACTCTTGTAGCAGCCGCTGAGTTTCATATGAAGTTATCTCCAG 242
| ||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct 222 A-GAGAAGTCGTCGTCGACTCTTGTAGCAACCGCTGAATTTCATATGAAGTTATCTCCAA 280
Query 243 ACAAGTTAATAGGGATTTATCATTCTTACGA-CCCAAGATATTTTTCAATTGGCTACGCC 301
|||| | || | || ||||| | || | ||||||||||||||||||||| ||||||
Sbjct 281 ACAA--T-CTACGAATCTATCA-TGATAATACCCCAAGATATTTTTCAATTGGTTACGCC 336
Query 302 TCTGGCTTGATCTATATGTATGGTGATCGATAC-ATGGCTAGACCTCTGATATGTAACCC 360
||||||||||||||| | ||||||||||||||| | ||||| ||||||||||||||||||
Sbjct 337 TCTGGCTTGATCTATTTATATGGTGATCGATACGA-GGCTACACCTCTGATATGTAACCC 395
Query 361 CAACACAGGACGATATGTGATCTTACCTAA-TCGGTATACTTACAGAAAGGCGTATAGCT 419
|||||||||| | ||| |||||||||||| | | |||||||| |||||||||| |||||
Sbjct 396 CAACACAGGAAGGTATACGATCTTACCTAAGT-GCTATACTTATAGAAAGGCGTTTAGCT 454
Query 420 TTTTCGGGTTTGACCCAATTGACAAGCAATACAAGGTATTGTCCATGCGT-TATCCATCT 478
|||||||||||||||||||||||||||| ||||||| |||||||||| | |||||||||
Sbjct 455 TTTTCGGGTTTGACCCAATTGACAAGCAGTACAAGGCATTGTCCATGA-TCTATCCATCT 513
Query 479 GGTCCTGGTCATAATAAAATACTTACATTAGGAGATGGAGATCTGACAT-GGAGAAAGAT 537
||||||||||| | |||||| ||||| || |||||||| ||| ||| || ||| ||||||
Sbjct 514 GGTCCTGGTCACAGTAAAATTCTTACTTTTGGAGATGGGGATATGA-ATTGGAAAAAGAT 572
Query 538 AAAATGTCCCT-TACCACAACCTGGTATTAAGAGTGATGGGATATGCATCAATGGGGTTT 596
||||| || | ||| ||| || |||| | ||| | ||||||||||||||||| ||||
Sbjct 573 AAAATATCG-TGTACTACA---TGATATTTACAGTCAAGGGATATGCATCAATGGTGTTT 628
Query 597 TGTATTTCTTAGCTGTGA-G--AG-TTG--A-A-TGCTCGTT-TG-AA--T-----A-TG 638
|||||| ||||| || | | || ||| | | || || | || || | | ||
Sbjct 629 TGTATTACTTAGGTGACACGTCAGATTGGGATAATGATCATGATGTAACGTCTGGTAATG 688
Query 639 TGATAGTTTGCTTTGATGTTAGG-TCTGAGAAATT-CACATATATTGACGTAGAGAGGAT 696
|| |||||||||||||| ||| | || || || || ||| | ||||| | |||| | | |
Sbjct 689 TGTTAGTTTGCTTTGAT-TTAAGATCCGA-AAGTTTCACCTTTATTGGCTTAGA-ATG-T 744
Query 697 TTGTCAATTGATCAACTACAATGGCAAATTAGCTGTGATTTATTGGGAGGATG 749
|||||||||| ||||| || |||||||||||||| |||| |||||| ||||
Sbjct 745 G-GTCAATTGATAAACTATAAGGGCAAATTAGCTGTAATTTTTTGGGATGATG 796
Score = 411 bits (222), Expect = 1e-113
Identities = 336/390 (86%), Gaps = 12/390 (3%)
Strand=Plus/Plus
Query 820 TGATGCCACTAATGAGTTGCGTGTGTGGGTTCTAGAGGATGTTGAGAAACATGAATGGTC 879
|||||||| | ||||| ||| ||||||||||||||||||||| |||||| | ||||||||
Sbjct 819 TGATGCCATTGATGAGATGCATGTGTGGGTTCTAGAGGATGTCGAGAAAAAGGAATGGTC 878
Query 880 GAAATATGCCTACACTTGGACCGATGATACATTCTTCCGT-CGTCATGTTTCCATCGCTG 938
|||||||||||||||||||||||| |||| ||| | |||| | ||| |||||| | | ||
Sbjct 879 GAAATATGCCTACACTTGGACCGAGGATAAATTATACCGTTC-TCAGGTTTCCGTGGTTG 937
Query 939 GAGCGACTGCTTCGGGTGAAATAGTATTTTCGATGCGCAAGTATTCATCTAAACAACCGT 998
|| ||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||
Sbjct 938 GAATGACTGCTTCGGGTGAAATAGTGTTTTCGATGCGCAAGTATACATCTGAACAACCGT 997
Query 999 TTTATGTTTTCTACTTCAATCCCGAAAGGAACACTCTCCAACGTGTTGAAATCCAAGGTT 1058
||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 998 TTTATGTTTACTACTTCAATCCCGAAAGGAACAATCTCCGACGTGTTGAAATCCAAGGTT 1057
Query 1059 TTGGTGAAGCGTTTAAGAAAACTTG-TAGC-GTTCGCACCTTTGTAAACCACGTAGAGGA 1116
||| ||||||||| ||| ||| || | ||| |||||||||| | |||||||||||
Sbjct 1058 TTG---AAGCGTTTACTAAAT-TTGGTA-CAGTTTACACCTTTGTAGATCACGTAGAGGA 1112
Query 1117 TCTTGATGTTAACGATTTAAAACAACTCAAGTCAGTCCATCCTCCATTGGTGAAGCCAGA 1176
|||| ||||| || |||||||||| ||||||||||||||||||||| |||| |||||||
Sbjct 1113 TCTTAATGTTTACAATTTAAAACATTTCAAGTCAGTCCATCCTCCATCGGTGCAGCCAGA 1172
Query 1177 ATTTTATTGTCTACCAGAATCAGAATCAGA 1206
|| | || | | | ||| |||||||||||
Sbjct 1173 ATATGAT-GAAT-C-AGATTCAGAATCAGA 1199
> AT3G56890.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:21062990-21063717 REVERSE LENGTH=660
Length=660
Score = 124 bits (67), Expect = 2e-27
Identities = 189/243 (78%), Gaps = 27/243 (11%)
Strand=Plus/Plus
Query 832 TGAGTTGCGTGTGTGGGTTCTAGAGGATGTTGAGAAACATGAATGG-TCGAAATATGCCT 890
||||||| || |||||||||||||||||||||||||||| |||||| || || |||| ||
Sbjct 261 TGAGTTGTGTTTGTGGGTTCTAGAGGATGTTGAGAAACAGGAATGGGTC-AAGTATGTCT 319
Query 891 ACACTTGGACCG-ATGA-T-ACATTC-TTCCGT-CGT-C-ATGTTTCCA-TCGCTGGAGC 942
|||||| |||| | || | | | || || || | | | | |||| || | |||||||
Sbjct 320 ACACTTT-ACCGGA-GAATGA-AGTCCTTG-GTTCCTGCGA-GTTTTCAGTTGCTGGAGT 374
Query 943 GACTGCTTCG-GGTGAAATAGTATTT-TCG-ATGCGCAAGTATTCATCTAAACAACCGTT 999
|||||| | || || || || ||| | | ||| |||||| ||| ||||| | ||
Sbjct 375 GACTGCAA-GAGGCGATATTGT-TTTGT-GTATG---AAGTATACATGTAAAC--C-GTA 425
Query 1000 TTATGTTTTCTACTTCAATCCCGAAAGGAACACTCTCCAACGTGTTGAAATCCAAGGTTT 1059
||||| ||||||||| ||||||||| ||| || |||||| |||||||||||||||||||
Sbjct 426 CTATGTATTCTACTTCGATCCCGAAAAGAAAACCCTCCAAAGTGTTGAAATCCAAGGTTT 485
Query 1060 TGG 1062
|||
Sbjct 486 TGG 488
> AT5G38810.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr5:15540484-15541540 REVERSE LENGTH=780
Length=780
Score = 78.7 bits (42), Expect = 1e-13
Identities = 46/48 (96%), Gaps = 0/48 (0%)
Strand=Plus/Plus
Query 832 TGAGTTGCGTGTGTGGGTTCTAGAGGATGTTGAGAAACATGAATGGTC 879
||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 582 TGAGTTGTGTGTGTGGGTTCTAGAGGATGTTGAGAAACAGGAATGGTC 629
> AT1G30945.1 | Symbols: | pseudogene, hypothetical protein |
chr1:11026338-11026784 REVERSE LENGTH=447
Length=447
Score = 71.3 bits (38), Expect = 2e-11
Identities = 46/50 (92%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 832 TGAGTTGCGTGTGTGGGTTCTAGAGGATGTTGAGAAACATGAATGGTCGA 881
|||||| ||| ||||||||||||||||||| |||||||| ||||||||||
Sbjct 222 TGAGTTACGTATGTGGGTTCTAGAGGATGTCGAGAAACACGAATGGTCGA 271
> AT1G47300.1 | Symbols: | F-box family protein | chr1:17339561-17340972
REVERSE LENGTH=921
Length=921
Score = 63.9 bits (34), Expect = 4e-09
Identities = 38/40 (95%), Gaps = 0/40 (0%)
Strand=Plus/Plus
Query 1027 GAACACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAA 1066
||||||| |||||||||||||||||||||||||||| |||
Sbjct 585 GAACACTATCCAACGTGTTGAAATCCAAGGTTTTGGAGAA 624
> AT1G30920.1 | Symbols: | F-box family protein | chr1:11004242-11005444
REVERSE LENGTH=1203
Length=1203
Score = 60.2 bits (32), Expect = 5e-08
Identities = 74/93 (80%), Gaps = 8/93 (9%)
Strand=Plus/Plus
Query 581 TGCATCAATGGGGTTTTGTATTTCTTAGCTGTGAGAGTTGA--ATGC--TCGTTTGAATA 636
|||||||||||| ||||||||| | |||| | | | || | |||| | | | || |
Sbjct 643 TGCATCAATGGGATTTTGTATTACCTAGC--T-AAAATTAATTATGCAAT-GGATAAAAA 698
Query 637 TGTGATAGTTTGCTTTGATGTTAGGTCTGAGAA 669
|||| ||||||||||||||||||||||||||||
Sbjct 699 TGTGCTAGTTTGCTTTGATGTTAGGTCTGAGAA 731
> AT1G30935.1 | Symbols: | pseudogene, F-box protein family, contains
F-box domain Pfam:PF00646 | chr1:11017436-11018990 REVERSE
LENGTH=1555
Length=1555
Score = 58.4 bits (31), Expect = 2e-07
Identities = 33/34 (97%), Gaps = 0/34 (0%)
Strand=Plus/Plus
Query 641 ATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCA 674
|||| |||||||||||||||||||||||||||||
Sbjct 679 ATAGCTTGCTTTGATGTTAGGTCTGAGAAATTCA 712
> AT1G31080.1 | Symbols: | F-box family protein | chr1:11091832-11092899
FORWARD LENGTH=1068
Length=1068
Score = 58.4 bits (31), Expect = 2e-07
Identities = 33/34 (97%), Gaps = 0/34 (0%)
Strand=Plus/Plus
Query 641 ATAGTTTGCTTTGATGTTAGGTCTGAGAAATTCA 674
|||| |||||||||||||||||||||||||||||
Sbjct 457 ATAGGTTGCTTTGATGTTAGGTCTGAGAAATTCA 490
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63604090515
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5