BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg936167

Length=535
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G03720.1 | Symbols: MRH6 | Adenine nucleotide alpha hydrolas...   869    0.0  


> AT2G03720.1 | Symbols: MRH6 | Adenine nucleotide alpha hydrolases-like 
superfamily protein | chr2:1132170-1133379 FORWARD 
LENGTH=846
Length=846

 Score =  869 bits (470),  Expect = 0.0
 Identities = 517/539 (96%), Gaps = 6/539 (1%)
 Strand=Plus/Plus

Query  1    CTGAGAGTGGGAGGAAAGTGATGGTTGTTGTGGACACAACTTCACAAACTAAGAATGCTC  60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  175  CTGAGAGTGGGAGGAAAGTGATGGTTGTTGTGGACACAACTTCACAAACTAAGAATGCTC  234

Query  61   TTCAATGGGCTTTAACACATTGTGTTCAAGATGAAGACAATATCACTCTCCTTCATGTCA  120
            ||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||
Sbjct  235  TTCAATGGGCTTTAACACATTGTGTTCAAGATGAAGATAATATCACTCTTCTCCATGTCA  294

Query  121  CAAGAACACCCGTAGGACAAGCTATAGATGAGACACAAAGGGAGAGAAACTCAAGGGCTC  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  295  CAAGAACACCCGTAGGACAAGCTATAGATGAGACACAAAGGGAGAGAAACTCAAGGGCTC  354

Query  181  ATGAACAAGTTCATCCATTGAAGAACTTTTGTCAACTCAAGAAACCTAACGTCAAAACAG  240
            |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct  355  ATGAACTAGTTCATCCATTGAAGAATTTTTGTCAACTCAAGAAACCTAACGTCAAAACGG  414

Query  241  AGATAGTGGTGGTTGAAACGGCGGAGGAAAAAGGGAAGACGATTGTTGAGGAATCAAAGA  300
            |||||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||
Sbjct  415  AGATAGTGGTGGTTGAAACGGCGGAGGAGAAAGGTAAGACGATAGTGGAGGAATCAAAGA  474

Query  301  AACAAGGAGCAGGCGTTTTGGTTTTAGGGCAGAGAAAGAGAACCTCGAAGTGGCGCGTGA  360
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct  475  AACAAGGAGCAGGCGTTTTGGTGTTAGGGCAGAGAAAGAGAACCTCGAAGTGGCGCGTGA  534

Query  361  TATGGAAATGGCGTACCAAGGGAGGAATGGGAGGAGTAGT---CGAGTATTGTATTCATA  417
            | |||||||||||||| ||||||||||||||||||| |||   |||||||||||||||||
Sbjct  535  TTTGGAAATGGCGTACGAAGGGAGGAATGGGAGGAGGAGTGGTCGAGTATTGTATTCATA  594

Query  418  ACTCCGATTGTATGGCTATTGCCGTAAGGAAGAAAAGTAACAATGGAGGTTACTTGATCA  477
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct  595  ACTCCGATTGTATGGCTATTGCCGTAAGGAAGAAGAGTAACAATGGAGGTTACTTGATCA  654

Query  478  CCACGAAACGTCACAAAGATTTCTGGCTCTTGGCTTAATTTTTTATTT-AACACACATT  535
            ||||||||||||||||||||||||||||||||||||||||||| |||| || ||| |||
Sbjct  655  CCACGAAACGTCACAAAGATTTCTGGCTCTTGGCTTAATTTTT-ATTTCAA-ACAAATT  711



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 25619414970


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5