BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg936215 Length=514 Score E Sequences producing significant alignments: (Bits) Value AT2G04031.1 | Symbols: | Protein of unknown function (DUF784) ... 448 3e-125 > AT2G04031.1 | Symbols: | Protein of unknown function (DUF784) | chr2:1304160-1304779 REVERSE LENGTH=620 Length=620 Score = 448 bits (242), Expect = 3e-125 Identities = 328/370 (89%), Gaps = 4/370 (1%) Strand=Plus/Plus Query 134 AGACATATCTCCAACTCCATTGGAAGTAGCTGATTCACCTACAACGGAATCTGAGATAGA 193 ||||||||||||||||||| |||||| | |||||||||| ||||| |||| ||||||||| Sbjct 96 AGACATATCTCCAACTCCAGTGGAAGGAACTGATTCACCCACAACAGAATATGAGATAGA 155 Query 194 GCTTGCTCACCATTTGCATAAAGACTATATTCTTGCTTGCCCTAAAAAGCCGAGTCCCAA 253 ||||||||||| || ||| |||| |||||||| ||||||||||||||||||||| |||| Sbjct 156 GCTTGCTCACCGCTTACATGAAGATTATATTCTGGCTTGCCCTAAAAAGCCGAGTTCCAA 215 Query 254 ATGCGAGGATGAGATTTTCAACAACATGTTGGATGAGACGACGCCAGTGACAGATGAATG 313 |||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||||||| Sbjct 216 ATGCGATGATGAGATTTTCAATAACATGTTGGATGGGACGACGCCAGTGACAAATGAATG 275 Query 314 TTGTCGTGATGTTTTGAATACTGGCAAAGATTGCCATCTCGCAATGGTAAAAATCATATT 373 ||||| |||| | ||||| |||||||||||||| || || ||| |||| ||||||||||| Sbjct 276 TTGTCATGATATATTGAAGACTGGCAAAGATTGTCACCTTGCATTGGTTAAAATCATATT 335 Query 374 CTCTAC-ATATGACTATAAAAATATTGCATCTAAGGCTATTCCAAAAAGTAAACAGGCAT 432 ||| || | |||| |||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct 336 CTCCACGA-ATGATTATAAAAAAATTGCATCTAAGGCTATTCCAAAAAGTAAACAGACAT 394 Query 433 GGAACGATTGTATCCGTAGAGTTGGCAAC-ACGATTGGTGCTCCGGTCTCTTTCGAGCCG 491 |||| |||||| ||||||||||||| | | |||||||||||||||||||||||| || Sbjct 395 GGAATGATTGTGTCCGTAGAGTTGGGATGGA-GATTGGTGCTCCGGTCTCTTTCGAACCT 453 Query 492 TAAACTAATA 501 ||||| |||| Sbjct 454 TAAACCAATA 463 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24564497883 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5