BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg936497 Length=303 Score E Sequences producing significant alignments: (Bits) Value AT3G27425.1 | Symbols: | ECA1-like gametogenesis related famil... 342 9e-94 > AT3G27425.1 | Symbols: | ECA1-like gametogenesis related family protein | chr3:10151058-10151375 FORWARD LENGTH=318 Length=318 Score = 342 bits (185), Expect = 9e-94 Identities = 223/241 (93%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 40 AGAAAAATT-TGTGTTCGAGAACCAACATAGACTTTATACCAGGATGTTTCCATGCGTTG 98 ||||||||| | |||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct 80 AGAAAAATTAT-TGTTCGAGAACCAACATAGACTATATACCGGGATGTTTCCATGCGTTG 138 Query 99 CAATTAGCATATAACAAAAATTACAGTCGCCTAACAAGAAATTGTTGCAGAGCAGTGTTC 158 |||||||| ||||||||| |||| |||| |||||||||||||||||||||||||||||| Sbjct 139 CAATTAGCGTATAACAAAGATTATAGTCTCCTAACAAGAAATTGTTGCAGAGCAGTGTTT 198 Query 159 TCACTTCCTACTACTTGTGTCTTGCTTGTCTATCCTGGAAAAACTTACCCTATTACCACC 218 ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||| Sbjct 199 TCACTTCCTACTACTTGTGCCTTGCTTGTCTATCCTGGCAAAACTTACCCTATTACTACC 258 Query 219 TTCAGATTAATTTGTATTTATAGCGATCCTCCTCCAGCAA-GTTCTCCATCAATTCTATA 277 || |||||||||||||||||||||||||||| |||||||| || |||||| || |||||| Sbjct 259 TTTAGATTAATTTGTATTTATAGCGATCCTCTTCCAGCAATGT-CTCCATTAAGTCTATA 317 Query 278 A 278 | Sbjct 318 A 318 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14024701971 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5