BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg936555 Length=190 Score E Sequences producing significant alignments: (Bits) Value AT3G27865.1 | Symbols: | snoRNA | chr3:10328510-10328601 FORWA... 132 1e-30 > AT3G27865.1 | Symbols: | snoRNA | chr3:10328510-10328601 FORWARD LENGTH=92 Length=92 Score = 132 bits (71), Expect = 1e-30 Identities = 84/90 (93%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 35 GCTCAGAGTATTGCATAATGTGCTCAAAGGAGAGGTTATCAATCTCTCCTCATACAAGAG 94 ||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| Sbjct 92 GCTCAGAGTATTGCATAATGTGCTCAAAGAAGAGGTTATCAAGCTCTTCTCATACAAGAG 33 Query 95 GTGTCAGAAATTTAGCATT-ATTCATCATC 123 |||||||||||| |||||| || ||||||| Sbjct 32 GTGTCAGAAATTAAGCATTGAT-CATCATC 4 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 8400325617 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5