BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg936652 Length=1473 Score E Sequences producing significant alignments: (Bits) Value AT3G28690.2 | Symbols: | Protein kinase superfamily protein | ... 2298 0.0 > AT3G28690.2 | Symbols: | Protein kinase superfamily protein | chr3:10755445-10757868 FORWARD LENGTH=1772 Length=1772 Score = 2298 bits (1244), Expect = 0.0 Identities = 1366/1425 (96%), Gaps = 7/1425 (0%) Strand=Plus/Plus Query 54 GAGAAATTAGGTGTTGAGAAAGGTGAAAAAGGGAAGATGTTGAGTAAAAAGACGAATGTT 113 |||||||| |||||||||||||||||||||||||||||| |||||||||| | ||||||| Sbjct 1 GAGAAATTGGGTGTTGAGAAAGGTGAAAAAGGGAAGATGATGAGTAAAAAAAAGAATGTT 60 Query 114 AAAAAAGATGGAGATGAGAGTGAAAGTGGGTTTTGGTTTAGATTCAAGTTTATCTTTAGT 173 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AAGAAAGATGGAGATGAGAGTGAAAGTGGGTTTTGGTTTAGATTCAAGTTTATCTTTAGT 120 Query 174 TGTATCTCTTCTAGATCAAAAGTTGATAGTTCCATGAATGCTACTACAGTTATAGCAGAA 233 ||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||| Sbjct 121 TGTATCTCTTCTAGATCAAAAGTTGATAGTTCCATGAATGCTACTGCTGTTATTGCAGAA 180 Query 234 CCTAAGAAAGTTATTGAGAAGCTTGAAGGTCAGCCAGCTCCGATTAAAGATACTGGTTGT 293 |||||||||||||||||||||||||||||||| |||||||||| |||||| ||||| ||| Sbjct 181 CCTAAGAAAGTTATTGAGAAGCTTGAAGGTCATCCAGCTCCGACTAAAGACACTGGCTGT 240 Query 294 GCGGAGAGCGGCTCCTCGACACCTTTAATGAGCGGCGAATTGAAGTATTCTTCTAAGCTA 353 ||||||||||| ||||| |||||| |||||||||| |||||||||||||||||||||||| Sbjct 241 GCGGAGAGCGGTTCCTCAACACCTCTAATGAGCGGGGAATTGAAGTATTCTTCTAAGCTA 300 Query 354 CGGATTTTCATGTTTAACGACCTTAAGTTAGCCACTAGGAATTTCAGACCAGAGTCTCTT 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 CGGATTTTCATGTTTAACGACCTTAAGTTAGCCACTAGGAATTTCAGACCAGAGTCTCTT 360 Query 414 CTCGGTGAGGGTGGGTTTGGATGTGTTTTTAAAGGATGGATAGAGGAGAATGGAACTGCA 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CTCGGTGAGGGTGGGTTTGGATGTGTTTTTAAAGGATGGATAGAGGAGAATGGAACTGCA 420 Query 474 CCTGTTAAGCCTGGTACTGGTCTAACTGTAGCTGTCAAAACACTGAATCCAGATGGCCTT 533 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 421 CCTGTCAAGCCTGGTACTGGTCTAACTGTAGCTGTCAAAACACTGAACCCAGATGGCCTT 480 Query 534 CAAGGTCACAAGGAGTGGCTGGCTGAGATTAACTTCCTTGGAAACCTTGTTCACCCAAGT 593 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 481 CAAGGTCACAAGGAGTGGCTGGCTGAAATTAACTTCCTTGGAAACCTTGTTCACCCCAGT 540 Query 594 CTTGTTAAATTAGTGGGCTATTGCATGGAAGAAGACCAACGGCTGCTTGTTTACGAGTTT 653 || ||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||| Sbjct 541 CTGGTTAAATTAGTTGGCTACTGCATGGAAGAAGACCAAAGGCTGCTTGTTTACGAGTTT 600 Query 654 ATGCCACGAGGGAGTTTGGAGAACCATCTTTTCAGAAGGACCTTACCTCTCCCTTGGTCT 713 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 ATGCCACGAGGAAGTTTGGAGAACCATCTTTTCAGAAGGACCTTACCTCTCCCTTGGTCT 660 Query 714 GT-CAGAATGAAAATTGCACTTGGTGCAGCTAAAGGTCTCGCCTTTCTTCACGAAGAAGC 772 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 GTTC-GAATGAAAATTGCACTTGGTGCAGCTAAAGGTCTCGCCTTTCTTCACGAAGAAGC 719 Query 773 TGAGAAGCCAGTCATATATCGAGATTTCAAAACATCTAATATATTACTGGATGCGGAATA 832 |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 720 TGAGAAGCCAGTCATATATCGAGATTTCAAAACATCTAATATTTTACTGGATGGGGAATA 779 Query 833 TAATTCAAAGCTGTCTGATTTTGGGCTTGCGAAAGATGCTCCAGACGAGAAAAAATCCCA 892 |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 780 TAATGCAAAGCTCTCTGATTTTGGGCTTGCAAAAGATGCTCCAGACGAGAAAAAATCCCA 839 Query 893 TGTATCAACCCGAGTCATGGGAACTTATGGTTATGCTGCCCCCGAATATGTAATGACTGG 952 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 840 CGTATCAACCCGAGTCATGGGAACTTATGGTTATGCTGCCCCTGAATATGTAATGACTGG 899 Query 953 ACATCTTACAACGAAGAGCGATGTATACAGCTTTGGAGTAGTTTTACTTGAAATATTAAC 1012 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 900 ACATCTGACAACGAAGAGCGATGTATACAGTTTTGGAGTAGTTTTACTTGAAATATTAAC 959 Query 1013 CGGACGAAGATCTGTGGATAAAAGTCGGCCGAACGGGGAACAAAACTTGGTCGAATGGGT 1072 ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 960 TGGACGAAGATCTGTGGATAAAAGTCGGCCGAACGGGGAACAGAACTTGGTAGAATGGGT 1019 Query 1073 GAGACCTCATCTCTTAGACAAGAAAAGGTTGTGCCGGTTATTAGATCCTCGGTTAGAGGG 1132 |||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||| Sbjct 1020 GAGACCTCATCTCTTAGACAAGAAAAGGTTTTACCGGCTATTAGATCCTCGGTTAGAGGG 1079 Query 1133 TCACTACTCAATTAAGGGTGCTCAGAAAGCCACGCAAGTAGCGGCGCAATGCCTTAACCG 1192 ||||||||| || || ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1080 TCACTACTCGATCAAAGGTGCTCAGAAAGCCACACAAGTAGCGGCGCAATGCCTTAACCG 1139 Query 1193 AGACTCTAAAGCTAGACC-AAAGATGAGTGAAGTTGTGGAAGCCTTAAAGCCGTTACCAA 1251 |||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| ||||||| Sbjct 1140 AGACTCCAAAGCCAGACCGAAA-ATGAGTGAAGTTGTGGAAGCCTTAAAGCCATTACCAA 1198 Query 1252 ATCTTAAAGACTTTGCGAGCTCTTCTTCTTCTTTCCAAACAATGCAGCCTGTTGCTAAGA 1311 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1199 ATCTTAAAGACTTTGCTAGCTCTTCTTCTTCTTTCCAAACAATGCAGCCTGTTGCTAAGA 1258 Query 1312 ACGGAGTCAGAACACAAGGAGGAGGGTTTGTATCGAGAAATGGACCGCCAATGAGGAGTT 1371 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1259 ACGGAGTCAGAACACAAGGAGGAGGGTTTGTGTCGAGAAATGGACCGCCAATGAGGAGTT 1318 Query 1372 TGTCTAGCTTAAACCTGCCTCAAGCATCCCCTTATCGTTATGCTCGACAATCACCAAAGC 1431 |||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||| Sbjct 1319 TGTCTAGCTTAAACTTGCCTCAAGCATCCCCTTATCGTTATGCCCGTCAATCACCAAAGC 1378 Query 1432 CTAAAGGAAAAGAGCCATGACTC-AAA-TAGATATTAATT-AGTT 1473 ||||||||||||||||||||||| ||| |||||||||||| |||| Sbjct 1379 CTAAAGGAAAAGAGCCATGACTCCAAAATAGATATTAATTTAGTT 1423 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 72640188615 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5