BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg936699
Length=1511
Score E
Sequences producing significant alignments: (Bits) Value
AT3G28980.1 | Symbols: | Protein of unknown function (DUF1216)... 983 0.0
AT3G28820.1 | Symbols: | Protein of unknown function (DUF1216)... 719 0.0
AT3G28810.1 | Symbols: | Protein of unknown function (DUF1216)... 680 0.0
> AT3G28980.1 | Symbols: | Protein of unknown function (DUF1216)
| chr3:10993190-10995002 REVERSE LENGTH=1628
Length=1628
Score = 983 bits (532), Expect = 0.0
Identities = 703/781 (90%), Gaps = 29/781 (4%)
Strand=Plus/Plus
Query 738 TGGTAAAGAAAGTGAAACTTCCGCCAAAGGTGAAAGTGAGACTTCCACGAAAG-GTAAAA 796
||| ||||||||||| |||||||| ||||||||||||||||||||| | ||| | |||
Sbjct 677 TGGGAAAGAAAGTGAGACTTCCGCTAAAGGTGAAAGTGAGACTTCCGC-TAAGAATGAAA 735
Query 797 GTGAGACTTCCGCCAAAGGTGAAAGTGAGACTTCCGCTAAAGGTAAAAGTGAGACTTCCG 856
|| |||||||||| ||||| |||||||||||||||||||||||| | ||| |||||||||
Sbjct 736 GTAAGACTTCCGCTAAAGGCGAAAGTGAGACTTCCGCTAAAGGTGAGAGTAAGACTTCCG 795
Query 857 CTAAAGGTGAAAGTGAGACTTCAGCTAAAGGTGAAAGTGAGACTTCCGCTAAAGGTGAAA 916
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 796 CTAAAGGAGAAAGTGAGACTTCCGCTAAAGGTGAAAGTGAGACTTCCGCTAAAGGTGAAA 855
Query 917 GTGAGACTTCTTCTTCAAAAACTGCTGGGGGAAGCTCAAATGTCGAAGCTAGTCAGAGCA 976
||||||||||||||||||||| || | | |||||||||||||||||
Sbjct 856 GTGAGACTTCTTCTTCAAAAA---CT-------G--C------CGAAGCTAGTCAGAGCA 897
Query 977 GCAGTGTAACCGTGACACAAGTCGAGGAAGAGACATCAAAAGATGTCTCGACATTCATAA 1036
||||| |||| ||||||||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct 898 GCAGTTTAACAGTGACACAAGTGGAGGAAGAGACGTCAAAAGATGTTTCGACATTCATAA 957
Query 1037 TGAACCTCGAAAAGAAGTGTCCACAAAAGGAGGAATTCAAGGTCTTCTTCGAGCAACTTA 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 958 TGAACCTCGAAAAGAAGTGTCCACAAAAGGAGGAATTCAAGGTCTTCTTCGAGCAACTTA 1017
Query 1097 AGGGTACAATGATTGCTCCCCGCAAAGAAAGAAAAGGTTTGTTTTCTAGGATTAAATCTG 1156
||||||| |||||||||||||| |||||||||||||||||||| |||||||||||| |||
Sbjct 1018 AGGGTACGATGATTGCTCCCCGAAAAGAAAGAAAAGGTTTGTTCTCTAGGATTAAAACTG 1077
Query 1157 CTGCTGGGAAACTATCTGGTGCCATGGCA-GTTATGCGGTCAAGAATTGGAAGCAAATCA 1215
||||||||||| |||||||||||||| || |||||| |||||||||||||||||||||||
Sbjct 1078 CTGCTGGGAAAATATCTGGTGCCATG-CAAGTTATGAGGTCAAGAATTGGAAGCAAATCA 1136
Query 1216 GCTGAGGTAAAGAAGAATATGGAAGCTTACCAAGAACAAGTGATGACGACTCTCCAAGAG 1275
|| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct 1137 GCAGAGGTAAAGAAGAATATGGAAGCTTACCAAGAACAAGTGATGAAGACTCTCGAAGAG 1196
Query 1276 TTAGATACCATCCACAG-TCAAATTGTGAGTCAGAACAAAGGCAAGGGTTCTATGACATG 1334
||||||||||||||| | ||||||||||||||||||||||||||||| |||| |||||||
Sbjct 1197 TTAGATACCATCCAC-GCTCAAATTGTGAGTCAGAACAAAGGCAAGGCTTCTTTGACATG 1255
Query 1335 CACACCCGCACAACAAATGCAGATTAAGCAGACAATCACCAAATGGGAAAAAGTCACGAC 1394
||||||| |||||||| | |||||||||||||||||||||||||||||| ||||||| ||
Sbjct 1256 CACACCCACACAACAAGTACAGATTAAGCAGACAATCACCAAATGGGAACAAGTCACAAC 1315
Query 1395 CCAATTCGTTGAGGTTGCAGTTCAGAGCGAGTCG-CAATCGtcttcctcttcttcctctt 1453
|||||||||||||||||||| |||||| |||||| | | ||||| |||||||||||||
Sbjct 1316 CCAATTCGTTGAGGTTGCAGCTCAGAGTGAGTCGTCTG-CATCTTCGTCTTCTTCCTCTT 1374
Query 1454 c-t-t-cttcctcttcttccGGCAAGCTTCAGGCGAATTAAACTCGAATGACAATAACTC 1510
| | | |||||||||||||||||||| | || || || |||||| ||| |||||||||||
Sbjct 1375 CCTCTTCTTCCTCTTCTTCCGGCAAGATGCAAGCAAAGTAAACTTGAAAGACAATAACTC 1434
Query 1511 A 1511
|
Sbjct 1435 A 1435
Score = 902 bits (488), Expect = 0.0
Identities = 588/635 (93%), Gaps = 11/635 (2%)
Strand=Plus/Plus
Query 1 AAAACCaaaaaaaaTAGAATAATGGCAAGAGTTCAACTATTGTTATGCTTCACCATTCTT 60
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 57 AAAAACTAAAAAAATAGAATAATGGCAAGAGTTCAACTATTGTTATGCTTCACCATTCTA 116
Query 61 TTTGCATCTGTGACCCTTCTGGACCTAGTATCAGCACACCTGAAATATAAGCCATCTTTG 120
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct 117 TTTGCATCTGTGACCCTTCTTGACCTAGTATCAGCACACCTGAAATTTAAGCCATCTTTG 176
Query 121 CCTCAAATCGAAGATCCAAAGACGGTGAAGGATGTAGAGCCTTACACCGTTAAAGTAGTA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 177 CCTCAAATCGAAGATCCAAAGACGGTGAAGGATGTAGAGCCTTACACCGTTAAAGTAGTA 236
Query 181 ATGGTCTTTGTGGCGGACCTCGAGAAGGAATG-CCCGAAGACAAGTAAATTCAAGGCCTT 239
|||||||||||||| ||||||||||||||||| ||| ||||||| || |||||||||||
Sbjct 237 ATGGTCTTTGTGGCCGACCTCGAGAAGGAATGTCCC-AAGACAAACAAGTTCAAGGCCTT 295
Query 240 CTTTGAGAAACTTAGGGGATTCGCCAAGTATGTTTGCCCAATAAGAAGAAGAGATCAAGT 299
||||||||||||||| |||||||||||||||||||||||||||||||| | | |||||
Sbjct 296 CTTTGAGAAACTTAGAGGATTCGCCAAGTATGTTTGCCCAATAAGAAGGATTGGCCAAGT 355
Query 300 AGATTACGACCGAGACCTGAAGGCCAAAGCCGGGGGTGTCTTCAAGGCCATATCTTCTTT 359
|||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 356 AGATTACGACCGGGACATGAAGGCCAAAGCCGGGGGTATCTTCAAGGCCATATCTTCTTT 415
Query 360 TGCTATTGGAAAGATTAGGGAGGAAATTCAAGAGGAGAAA-ATGGAGGCCATTAATACCT 418
||| |||||||||||||||||||||||||||||||| ||| | |||||| ||| ||||||
Sbjct 416 TGCGATTGGAAAGATTAGGGAGGAAATTCAAGAGGAAAAACA-GGAGGCTATTGATACCT 474
Query 419 TTAGGTTTATGAAATCTGTGGCGGCTAAAATTATGGGCGGTCGTAAAAAAGAGGAGAGTG 478
||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||| ||
Sbjct 475 TTAGGTTCATGAAATCTGTCGCGGCTAAAATTATGGGAGGTCGTAAGAAAGAGGAGAATG 534
Query 479 AAGAAACCATGAAACTAACAGCAGAACAACAAAAGGAAATCAAAGAAGGAATCTTGAAAT 538
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 535 AAGAAACCATGACACTAACAGCTGAACAACAAAAGGAAATCAAAGAAGGAATCTTGAAAT 594
Query 539 GGGAAACAATTATTACTCGGATCACAAACACAATGGTAAT-GAGCACAACCAAT-TCTGC 596
||||||| |||||||||||||||||||||||||||||| | ||||||| | || |||||
Sbjct 595 GGGAAACCATTATTACTCGGATCACAAACACAATGGTA-TCGAGCACATC-AACCTCTGC 652
Query 597 TTC--CG-GTGAAGAATCTAGCGTTGGAAAAGAAA 628
||| | ||||||| ||||| ||||| |||||||
Sbjct 653 TTCTTCCAGTGAAGAGTCTAGTGTTGGGAAAGAAA 687
Score = 204 bits (110), Expect = 2e-51
Identities = 144/160 (90%), Gaps = 4/160 (3%)
Strand=Plus/Plus
Query 745 GAAAGTGAAACTTCCGCCAAAG-GTGAAAGTGAGACTTCCACGAAAGGTAAAAGTGAGAC 803
|||||||| ||||||| | ||| ||||||| |||||||| | ||||| ||||||||||
Sbjct 708 GAAAGTGAGACTTCCG-CTAAGAATGAAAGTAAGACTTCCGCTAAAGGCGAAAGTGAGAC 766
Query 804 TTCCGCCAAAGGTGAAAGTGAGACTTCCGCTAAAGGTA-AAAGTGAGACTTCCGCTAAAG 862
|||||| |||||||| ||| |||||||||||||||| | |||||||||||||||||||||
Sbjct 767 TTCCGCTAAAGGTGAGAGTAAGACTTCCGCTAAAGG-AGAAAGTGAGACTTCCGCTAAAG 825
Query 863 GTGAAAGTGAGACTTCAGCTAAAGGTGAAAGTGAGACTTC 902
|||||||||||||||| |||||||||||||||||||||||
Sbjct 826 GTGAAAGTGAGACTTCCGCTAAAGGTGAAAGTGAGACTTC 865
Score = 182 bits (98), Expect = 1e-44
Identities = 123/135 (91%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 745 GAAAGTGAA-ACTTCCGCCAAAGGTGAAAGTGAGACTTCCACGAAAGGTAAAAGTGAGAC 803
|||||| || |||||||| ||||| ||||||||||||||| | |||||| | ||| ||||
Sbjct 732 GAAAGT-AAGACTTCCGCTAAAGGCGAAAGTGAGACTTCCGCTAAAGGTGAGAGTAAGAC 790
Query 804 TTCCGCCAAAGGTGAAAGTGAGACTTCCGCTAAAGGTAAAAGTGAGACTTCCGCTAAAGG 863
|||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 791 TTCCGCTAAAGGAGAAAGTGAGACTTCCGCTAAAGGTGAAAGTGAGACTTCCGCTAAAGG 850
Query 864 TGAAAGTGAGACTTC 878
|||||||||||||||
Sbjct 851 TGAAAGTGAGACTTC 865
Score = 148 bits (80), Expect = 1e-34
Identities = 101/111 (91%), Gaps = 2/111 (2%)
Strand=Plus/Plus
Query 745 GAAAGTGAAACTTCCGCCAAAGGTGAAAGTGAGACTTCCACGAAAGGTA-AAAGTGAGAC 803
|||||||| |||||||| |||||||| ||| |||||||| | ||||| | ||||||||||
Sbjct 756 GAAAGTGAGACTTCCGCTAAAGGTGAGAGTAAGACTTCCGCTAAAGG-AGAAAGTGAGAC 814
Query 804 TTCCGCCAAAGGTGAAAGTGAGACTTCCGCTAAAGGTAAAAGTGAGACTTC 854
|||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct 815 TTCCGCTAAAGGTGAAAGTGAGACTTCCGCTAAAGGTGAAAGTGAGACTTC 865
Score = 124 bits (67), Expect = 2e-27
Identities = 80/86 (93%), Gaps = 2/86 (2%)
Strand=Plus/Plus
Query 842 AAAGTGAGACTTCCGCTAAAGGTGAAAGTGAGACTTCAGCTAA-AGGTGAAAGTGAGACT 900
||||||||||||||||||||||||||||||||||||| ||||| | ||||||| |||||
Sbjct 685 AAAGTGAGACTTCCGCTAAAGGTGAAAGTGAGACTTCCGCTAAGAA-TGAAAGTAAGACT 743
Query 901 TCCGCTAAAGGTGAAAGTGAGACTTC 926
||||||||||| ||||||||||||||
Sbjct 744 TCCGCTAAAGGCGAAAGTGAGACTTC 769
Score = 87.9 bits (47), Expect = 3e-16
Identities = 58/63 (92%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 865 GAAAGTGAGACTTCAGCTAAAGGTGAAAGTGAGACTTCCGCTAA-AGGTGAAAGTGAGAC 923
|||||||||||||| ||||||||||||||||||||||||||||| | ||||||| ||||
Sbjct 684 GAAAGTGAGACTTCCGCTAAAGGTGAAAGTGAGACTTCCGCTAAGAA-TGAAAGTAAGAC 742
Query 924 TTC 926
|||
Sbjct 743 TTC 745
Score = 71.3 bits (38), Expect = 3e-11
Identities = 38/38 (100%), Gaps = 0/38 (0%)
Strand=Plus/Plus
Query 889 GAAAGTGAGACTTCCGCTAAAGGTGAAAGTGAGACTTC 926
||||||||||||||||||||||||||||||||||||||
Sbjct 684 GAAAGTGAGACTTCCGCTAAAGGTGAAAGTGAGACTTC 721
> AT3G28820.1 | Symbols: | Protein of unknown function (DUF1216)
| chr3:10827647-10829396 FORWARD LENGTH=1372
Length=1372
Score = 719 bits (389), Expect = 0.0
Identities = 562/641 (88%), Gaps = 30/641 (5%)
Strand=Plus/Plus
Query 842 AAAGTGAGACTTCCGCTAAAGGTGAAAGTGAGACTTCAGCTAAAGGTGAAAGTGAGACTT 901
||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||
Sbjct 711 AAAGTGAGAGTTCCGCTAAAGGTGAAAGTGAGACATCCGCTAAAGGTGAAAGTAAGACTT 770
Query 902 CCGCTAAAGGTGAAAGTGAGACTTCTTCTTCAAAAACTGCTGGGGGAAGCTC-A-AA-TG 958
||||||||||||||||||||||||| |||||||||| |||||| |||||||| | || |
Sbjct 771 CCGCTAAAGGTGAAAGTGAGACTTCCTCTTCAAAAAGTGCTGGTGGAAGCTCTACAAGCG 830
Query 959 -T-C-------G-AA-----GCTAGTCAGAGCAGCAGTGTAACCGTGACACAAGTCGAGG 1003
| | | || |||||||||||||| ||||||| ||||||||||||||||
Sbjct 831 CTACTAAAGAAGAAAGTTCCGCTAGTCAGAGCAGTGGTGTAACAGTGACACAAGTCGAGG 890
Query 1004 AAGAGACATCAAAAGATGTCTCGACATTCATAATGAACCTCGAAAAGAAGTGTCCACAAA 1063
||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 891 AAGAGACGTCCAAAGATGTTTCGACATTCATAATGAACCTCGAAAAGAAGTGTCCACAAA 950
Query 1064 AGGAGGAATTCAAGGTCTTCTTCGAGCAACTTAAGGGTACAATGATTGCTCCCCGCAAAG 1123
||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 951 AGGAGGAATACAAGGTCTTCTTCGAGCAACTCAAGGGTACAATGATTGCTCCCCCCAAAG 1010
Query 1124 AAAGAAAAGGTTTGTTTTCTAGGATTAAATCTGCTGCTGGGAAACTATCTGGTGCCATGG 1183
||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||
Sbjct 1011 AAAGAAAAGGTTTATTTTCTAGGATTAAATCTGCTGCTGGTAAACTATCGGGTGCGATGG 1070
Query 1184 CAGTTATGCGGTCAAGAATTGGAAGCAAATCAGCTGAGGTAAAGAAGAATATGGAAGCTT 1243
|||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1071 GAGTTATAAGATCAAGAATTGGAAGCAAATCAGCTGAGGTTAAGAAGAATATGGAAGCTT 1130
Query 1244 ACCAAGAACAAGTGATGACGACTCTCCAAGAGTTAGATACCATCCACAGTCAAATTGTGA 1303
|||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||
Sbjct 1131 ACCAAGAACAAGTGATGAAGACTCTCGAAGAGTTAGATACCATCCATAGTCAAATTGTGA 1190
Query 1304 GTCAGAAC-AAAGGCAAG---G-GT--TCTATGACATGCACACCCGCACAACAAATGCAG 1356
|||||| | ||||||||| | | ||| ||||||||||||| | |||||||| |||
Sbjct 1191 GTCAGA-CTAAAGGCAAGCAAGAGGGGTCTTTGACATGCACACCAGAACAACAAACACAG 1249
Query 1357 ATTAAG-CAGACAATCACCAAATGGGAAAAAGTCACGACCCAATTCGTTGAGGTTGC-AG 1414
|||||| | |||||| || || |||||| ||||||| ||||||||||||||| ||| |
Sbjct 1250 ATTAAGAC-GACAATTACTAAGTGGGAACAAGTCACAACCCAATTCGTTGAGACTGCTA- 1307
Query 1415 TTCAGAGCGAGTCGCAATCGtcttcctcttcttcctcttct 1455
||||||||||| | ||||| ||||| || |||| ||||||
Sbjct 1308 TTCAGAGCGAGACACAATCTTCTTCAACTACTTCATCTTCT 1348
Score = 643 bits (348), Expect = 0.0
Identities = 566/669 (85%), Gaps = 23/669 (3%)
Strand=Plus/Plus
Query 1 AAAAC-Caaaaa-aaaTAGAATAATGGCAAGAGTTCAACTATTGTTATGCTTCACCATTC 58
||||| ||||| ||| | |||||||||||||||||| ||||||||||||||||||||||
Sbjct 45 AAAACAAAAAAATAAAAAAAATAATGGCAAGAGTTCAGCTATTGTTATGCTTCACCATTC 104
Query 59 TTTTTGCATCTGTGACCCTTCTGGACCTAGTATCAGCACACCTGAAA-TATAAGCCATCT 117
|||||||||| |||| ||||||||| | || ||||| || |||| | ||||||| ||
Sbjct 105 TTTTTGCATCAGTGAATCTTCTGGACGTTGTTTCAGCTCATTTGAAGCT-TAAGCCAACT 163
Query 118 TTGCCTCAAATCGAAGATCCA-AAGACGGTGAAGGATGTAGAGCCTTACACCGTTAAAGT 176
|||||||| || ||| |||| || ||| |||||||||| || |||||||||||||||||
Sbjct 164 TTGCCTCAGATTGAACCTCCACAA-ACGTTGAAGGATGTTGAACCTTACACCGTTAAAGT 222
Query 177 AGTAATGGTCTTTGTGGCGGACCTCGAGAAGGAATG-CCCGAAGACAAGTAAATTCAAGG 235
||| |||||||||||| | ||||||||||| ||||| ||| ||||||| |||||| |||
Sbjct 223 AGTGATGGTCTTTGTGTCCGACCTCGAGAAAGAATGTCCC-AAGACAAATAAATTTAAGA 281
Query 236 CCTTCTTTGAGAAACTTAGGGGATTCGCCAAGTATGTTTGCCCAATA-AGAAG-AAGAGA 293
| |||||||||||||| |||| | ||||||| ||||||||||||||| | ||| || |||
Sbjct 282 CTTTCTTTGAGAAACTCAGGGCAGTCGCCAAATATGTTTGCCCAATACA-AAGGAA-AGA 339
Query 294 TCAAGTAGATTACGACCGAG-ACCTGAAGGCCAAAGCCGGGGGTGTCTTCAAGGCCATAT 352
|||||||||||||||| || || |||||||||| ||||| ||| || ||| ||||||||
Sbjct 340 TCAAGTAGATTACGACA-AGGACATGAAGGCCAAGGCCGGAGGTCTCGTCAGGGCCATAT 398
Query 353 CTTCTTTTGCTATTGGAAAGATTAGGGAGGAAATTCAAGAGGAGAAAATGGAGGCCATTA 412
||||||| || ||||||||||| | |||| ||||||||||| |||||||| | ||||
Sbjct 399 CTTCTTTCGCAATTGGAAAGATAAAAAAGGAGATTCAAGAGGATAAAATGGAAGTTATTA 458
Query 413 ATACCTTTAGGTTTATGAAATCTGTGGCGGCTAAAATTATGGGCGGTCGTAAAAAAGAGG 472
||||||||| |||||||| || | | ||| |||||||| |||| | || ||||| ||||
Sbjct 459 ATACCTTTAAGTTTATGAGATTTCTTGCGACTAAAATTGTGGGAAGCCGCAAAAAGGAGG 518
Query 473 AGAGTGAAGAAACCATGAAACTAACAGCAGAACAACAAAAGGAAATCAAAGAAGGAATCT 532
|||| || ||| | ||||| |||||||||||||||||||| |||||||||||||| ||||
Sbjct 519 AGAGCGAGGAATCAATGAAGCTAACAGCAGAACAACAAAAAGAAATCAAAGAAGGGATCT 578
Query 533 TGAA-ATGGGAAACAATTATTACTCGGATCACAAACACAATGGTAAT-GAGCACAACCAA 590
| || |||||||||||| ||||||||||||||||||||||||||| | ||||||||||||
Sbjct 579 T-AAGATGGGAAACAATCATTACTCGGATCACAAACACAATGGTA-TCGAGCACAACCAA 636
Query 591 TTCTGCTTC--CGG-TGAAGAATCTAGCGTTGGAAAAGAAACTTCAAGC-AACAACAGCA 646
|||||||| | |||||| ||||| ||||| |||||| |||| ||| || |||||||
Sbjct 637 CTCTGCTTCTTCCAATGAAGAGTCTAGTGTTGGGAAAGAAGCTTCCAGCGAA-AACAGCA 695
Query 647 AAAGCTCTG 655
|||||||||
Sbjct 696 AAAGCTCTG 704
Score = 130 bits (70), Expect = 4e-29
Identities = 80/85 (94%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 794 AAAGTGAGACTTCCGCCAAAGGTGAAAGTGAGACTTCCGCTAAAGGTAAAAGTGAGACTT 853
||||||||| |||||| ||||||||||||||||| |||||||||||| ||||| ||||||
Sbjct 711 AAAGTGAGAGTTCCGCTAAAGGTGAAAGTGAGACATCCGCTAAAGGTGAAAGTAAGACTT 770
Query 854 CCGCTAAAGGTGAAAGTGAGACTTC 878
|||||||||||||||||||||||||
Sbjct 771 CCGCTAAAGGTGAAAGTGAGACTTC 795
> AT3G28810.1 | Symbols: | Protein of unknown function (DUF1216)
| chr3:10822471-10823941 REVERSE LENGTH=1305
Length=1305
Score = 680 bits (368), Expect = 0.0
Identities = 535/611 (88%), Gaps = 30/611 (5%)
Strand=Plus/Plus
Query 842 AAAGTGAGACTTCCGCTAAAGGTGAAAGTGAGACTTCAGCTAAAGGTGAAAGTGAGACTT 901
||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||
Sbjct 644 AAAGTGAGAGTTCCGCTAAAGGTGAAAGTGAGACATCCGCTAAAGGTGAAAGTAAGACTT 703
Query 902 CCGCTAAAGGTGAAAGTGAGACTTCTTCTTCAAAAACTGCTGGGGGAAGCTC-A-AA-TG 958
||||||||||||||||||||||||| |||||||||| |||||| |||||||| | || |
Sbjct 704 CCGCTAAAGGTGAAAGTGAGACTTCCTCTTCAAAAAGTGCTGGTGGAAGCTCTACAAGCG 763
Query 959 -T-C-------G-AA-----GCTAGTCAGAGCAGCAGTGTAACCGTGACACAAGTCGAGG 1003
| | | || |||||||||||||| ||||||| ||||||||||||||||
Sbjct 764 CTACTAAAGAAGAAAGTTCCGCTAGTCAGAGCAGTGGTGTAACAGTGACACAAGTCGAGG 823
Query 1004 AAGAGACATCAAAAGATGTCTCGACATTCATAATGAACCTCGAAAAGAAGTGTCCACAAA 1063
||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 824 AAGAGACGTCCAAAGATGTTTCGACATTCATAATGAACCTCGAAAAGAAGTGTCCACAAA 883
Query 1064 AGGAGGAATTCAAGGTCTTCTTCGAGCAACTTAAGGGTACAATGATTGCTCCCCGCAAAG 1123
||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 884 AGGAGGAATACAAGGTCTTCTTCGAGCAACTCAAGGGTACAATGATTGCTCCCCCCAAAG 943
Query 1124 AAAGAAAAGGTTTGTTTTCTAGGATTAAATCTGCTGCTGGGAAACTATCTGGTGCCATGG 1183
||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||
Sbjct 944 AAAGAAAAGGTTTATTTTCTAGGATTAAATCTGCTGCTGGTAAACTATCGGGTGCGATGG 1003
Query 1184 CAGTTATGCGGTCAAGAATTGGAAGCAAATCAGCTGAGGT-AAAGAAGAATATGGAAGCT 1242
|||||||||||| |||||||||||||||||||| ||||| ||| ||| ||||||| ||
Sbjct 1004 GAGTTATGCGGTCTAGAATTGGAAGCAAATCAGCAGAGGTTAAA-AAGTCTATGGAAACT 1062
Query 1243 TACCAAGAACAAGTGATGACGACTCTCCAAGAGTTAGATACCATCCACAGTCAAATTGTG 1302
|||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1063 TACCAAGAGCAAGTGATGAAAACTCTTCAAGAGTTAGATACCATCCACAGTCAAATTGTG 1122
Query 1303 AGTCAGAACAAAGGCAAG---G--GT-TCTATGACATGCACACCCGCACAACAAATGCAG 1356
||||||||| |||||||| | | ||| ||||||||||||| |||||||||| |||
Sbjct 1123 AGTCAGAACCAAGGCAAGAAAGAAGGATCTTTGACATGCACACCAGCACAACAAACACAG 1182
Query 1357 ATTAAG-CAGACAATCACCAAATGGGAAAAAGTCACGACCCAATTCGTTGAGGTTGC-AG 1414
|||||| || ||||| || || |||||| ||||||| ||||||||||| ||| || |
Sbjct 1183 ATTAAGACA-ACAATTACTAAGTGGGAACAAGTCACAACCCAATTCGTAGAGACCGCTA- 1240
Query 1415 TTCAGAGCGAG 1425
|||||||||||
Sbjct 1241 TTCAGAGCGAG 1251
Score = 130 bits (70), Expect = 4e-29
Identities = 80/85 (94%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 794 AAAGTGAGACTTCCGCCAAAGGTGAAAGTGAGACTTCCGCTAAAGGTAAAAGTGAGACTT 853
||||||||| |||||| ||||||||||||||||| |||||||||||| ||||| ||||||
Sbjct 644 AAAGTGAGAGTTCCGCTAAAGGTGAAAGTGAGACATCCGCTAAAGGTGAAAGTAAGACTT 703
Query 854 CCGCTAAAGGTGAAAGTGAGACTTC 878
|||||||||||||||||||||||||
Sbjct 704 CCGCTAAAGGTGAAAGTGAGACTTC 728
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74547809325
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5