BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg936755
Length=1732
Score E
Sequences producing significant alignments: (Bits) Value
AT3G29360.1 | Symbols: | UDP-glucose 6-dehydrogenase family pr... 2564 0.0
AT5G39320.1 | Symbols: | UDP-glucose 6-dehydrogenase family pr... 1493 0.0
AT5G15490.1 | Symbols: | UDP-glucose 6-dehydrogenase family pr... 1114 0.0
> AT3G29360.1 | Symbols: | UDP-glucose 6-dehydrogenase family
protein | chr3:11267091-11269229 REVERSE LENGTH=1794
Length=1794
Score = 2564 bits (1388), Expect = 0.0
Identities = 1580/1671 (95%), Gaps = 19/1671 (1%)
Strand=Plus/Plus
Query 74 AGAAGCAGTGAAA-ATGGTGAAGATTTGTTGTATTGGAGCTGGGTATGTTGGTGGACCAA 132
||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 54 AGAAGAAGTGAAAGATGGTGAAGATATGTTGTATTGGAGCTGGGTATGTTGGTGGACCAA 113
Query 133 CAATGGCAGTGATTGCTTTGAAATGTCCAGACGTTGAAGTAGCGGTTGTTGATATCTCTG 192
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 114 CAATGGCAGTGATTGCATTGAAATGTCCAGACGTTGAAGTAGCGGTTGTTGATATCTCTG 173
Query 193 TACCACGTATCAACGCTTGGAACAGTGACCA-GCTTCCGATTTACGAGCCTGGTCTTGAT 251
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 174 TACCACGTATCAACGCTTGGAACAGTGA-CACGCTTCCGATTTACGAGCCTGGTCTTGAT 232
Query 252 GATGTTGTGAAGCAATGCCGTGGAAAGAACCTTTTCTTTAGTACTGATGTTGAGAAACAT 311
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 233 GATGTTGTGAAGCAATGCCGTGGCAAGAACCTTTTCTTTAGTACTGATGTTGAGAAACAT 292
Query 312 GTTAGGGAAGCTGATATTGTGTTTGTTTCTGTCAATACACCGACGAAAACTAGAGGTCTT 371
||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct 293 GTTAGGGAAGCTGATATTGTGTTTGTTTCTGTCAACACACCGACTAAGACTAGAGGTCTT 352
Query 372 GGTGCTGGTAAAGCTGCGGATCTTACGTATTGGGAGAGCGCTGCACGTATGATCGCTGAT 431
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 353 GGTGCTGGTAAAGCTGCGGATCTTACGTACTGGGAGAGCGCTGCGCGTATGATCGCTGAT 412
Query 432 GTGTCGGTATCGGATAAGATTGTGGTTGAGAAATCGACTGTTCCGGTTAAAACAGCTGAA 491
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 413 GTTTCGGTATCGGATAAGATTGTCGTTGAGAAATCGACTGTTCCGGTTAAAACAGCTGAA 472
Query 492 GCTATTGAGAAGATTTTGACACATAATAGCAAAGGGATTAAGTTTCAGATTCTTTCGAAT 551
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 473 GCTATTGAGAAGATTTTGACACATAACAGTAAAGGGATTAAGTTTCAGATTCTTTCGAAT 532
Query 552 CCGGAGTTTTTGGCGGAAGGAACCGCGATCAAGGATCTTTTTAACCCTGACCGTGTTCTT 611
|| |||||||||||||||||||||||||| ||||| || ||||| || ||||||||||||
Sbjct 533 CCCGAGTTTTTGGCGGAAGGAACCGCGATTAAGGACCTATTTAATCCGGACCGTGTTCTT 592
Query 612 ATTGGAGGGCGGGAGACCCCGGAAGGGTTTAAAGCGGTGCAGACTCTCAAGGATGTGTAT 671
|| ||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 593 ATCGGAGGGCGGGAAACCCCAGAAGGGTTTAAAGCGGTGCAGACTCTCAAGAATGTGTAT 652
Query 672 GCTCATTGGGTTCCTGAAGGCCAAATCATAACCACCAATCTATGGTCTGCTGAGCTTTCC 731
|| || |||||||||||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct 653 GCACACTGGGTTCCTGAAGGCCAAATCATAACAACCAATCTCTGGTCTGCTGAGCTGTCC 712
Query 732 AAGCTTGCAGCAAACGCTTTCTTGGCTCAAAGGATTTCATCTGTCAATGCTATGTCGGCT 791
|||||||| |||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 713 AAGCTTGCGGCAAACGCTTTCTTGGCTCAAAGGATTTCATCAGTGAATGCTATGTCGGCT 772
Query 792 TTATGTGAAGCCACTGGTGCAGATGTCACGCAAGTGTCTTACGCCGTTGGTACAGACTCG 851
| ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct 773 CTGTGTGAAGCCACAGGCGCAGATGTCACGCAAGTGTCTTACGCGGTTGGTACAGACTCA 832
Query 852 AGAATTGGTCCTAAGTTCTTGAACTCGAGTGTCGGATTCGGAGGTTCGTGTTTCCAGAAG 911
|| |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 833 AGGATTGGTCCCAAGTTCTTGAACTCGAGTGTTGGATTCGGTGGTTCGTGTTTCCAGAAG 892
Query 912 GATATTCTGAATCTTGTCTACATCTGTGAGTGCAACGGACTCCCGGAAGTGGCAGAGTAC 971
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 893 GACATTCTGAATCTTGTCTACATCTGTGAGTGCAACGGACTCCCGGAAGTGGCAGAGTAC 952
Query 972 TGGAAACAAGTCATCAAGATCAATGACTACCAGAAGAGCCGGTTCGTGAACCGTGTTGTT 1031
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 953 TGGAAGCAAGTCATCAAGATCAATGACTACCAGAAGAGCCGGTTCGTGAACCGTGTTGTT 1012
Query 1032 TCTTCCATGTTCAACTCCGTATCAAACAAGAAGATTGCGGTTCTCGGTTTCGCATTCAAG 1091
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1013 TCCTCCATGTTCAACTCTGTATCAAACAAGAAGATTGCGGTTCTCGGTTTCGCATTCAAG 1072
Query 1092 AAAGATACAGGTGACACAAGGGAAACTCCAGCCATCGACGTGTGCAAGGGTCTTCTCGAA 1151
||||| || |||||||||||||| |||||||||||||| ||||||||||||||| | |||
Sbjct 1073 AAAGACACCGGTGACACAAGGGAGACTCCAGCCATCGATGTGTGCAAGGGTCTTTTAGAA 1132
Query 1152 GACAAAGCAAGGCTAAGTATTTACGACCCGCAGGTGACTGAGGATCAGATCCAGAGGGAT 1211
||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||
Sbjct 1133 GACAAAGCAAGGCTAAGCATTTACGACCCACAAGTGACTGAGGATCAGATCCAGAGGGAT 1192
Query 1212 TTATCCATGAACAAGTTCGACTGGGACCATCCGCTACATTTGCAGCCAATGAGCCCAACC 1271
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1193 TTATCCATGAACAAGTTCGACTGGGACCATCCTCTACATTTGCAGCCAATGAGCCCAACA 1252
Query 1272 ACAGTGAAACAAGTGAGCGTTACTTGGGACGCATACGAAGCAACTAAGGACGCGCACGGT 1331
|||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1253 ACAGTGAAACAAGTGACCGTTACTTGGGACGCATACGAAGCAACTAAGGACGCTCACGGT 1312
Query 1332 ATCTGCATCATGACTGAGTGGGATGAGTTCAAGAAC-TTGGACTTCCAGAAGATCTTTGA 1390
|||||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||
Sbjct 1313 ATCTGCATCATGACCGAGTGGGATGAGTTCAAGAACCTTG-ATTTCCAGAAGATCTTTGA 1371
Query 1391 CAACATGCAGAAACCGGCTTTCGTGTTCGACGGAAGAAACATTATGAATCTGCAAAAGCT 1450
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1372 CAACATGCAGAAACCAGCTTTCGTGTTCGATGGAAGAAACATTATGAATCTGCAAAAGCT 1431
Query 1451 AAGGGAGATTGGTTTCATTGTTTACTCCATTGGTAAGCCCCTTGACGACTGGCTCAAGGA 1510
||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1432 AAGGGAGATTGGTTTCATTGTTTACTCCATTGGTAAGCCTCTCGACGACTGGCTCAAGGA 1491
Query 1511 CATGCCTGCCGTTGCCTAATGATGTCCATTGCTGATTCTTTCGTCCTCCATCATTTGTGC 1570
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 1492 CATGCCTGCCGTTGCCTAATGATGTTCATTGCTGACTCTTTCGTCCTCCATCATTTGTGC 1551
Query 1571 TT--CTT-TTGTTGT--TT-GTCTTTGAA-ACTTGTTATATTTCTTACAATGTGTTTGTT 1623
|| ||| || |||| || |||||| || ||||||||||||||||||||| ||||||||
Sbjct 1552 TTTTCTTCTTCTTGTGGTTTGTCTTT-AAGACTTGTTATATTTCTTACAATATGTTTGTT 1610
Query 1624 ATATGTCTCTGGTGTGtttttttttttttttt-t-ttcaactttcatattttttttGGTC 1681
|| | |||||||||||| |||| |||||||| | || | ||||||||||||||| ||||
Sbjct 1611 ATGT-TCTCTGGTGTGTGTTTTGTTTTTTTTGGTATT-A-CTTTCATATTTTTTT-GGTC 1666
Query 1682 GAAGAGGACTTGTATTCGACAATGTCGCTTCAATTTTGTTGTTTCCTTAGA 1732
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1667 GAAGAGGACTTGTATTCGACAATGTCGCTTCAATTTTGTTGTTTCCTTAGA 1717
> AT5G39320.1 | Symbols: | UDP-glucose 6-dehydrogenase family
protein | chr5:15742762-15744943 FORWARD LENGTH=1792
Length=1792
Score = 1493 bits (808), Expect = 0.0
Identities = 1248/1461 (85%), Gaps = 28/1461 (2%)
Strand=Plus/Plus
Query 84 AAAATGGTGAAGATTTGTTGTATTGGAGCTGGGTATGTTGGTGGACCAACAATGGCAGTG 143
|||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct 100 AAAATGGTGAAGATCTGTTGTATTGGAGCTGGATATGTAGGAGGACCAACAATGGCAGTG 159
Query 144 ATTGCTTTGAAATGTCCAGACGTTGAAGTAGCGGTTGTTGATATCTCTGTACC-ACGTAT 202
||||| |||||||||||||| ||||||| || ||||||||||||||||| || | | ||
Sbjct 160 ATTGCATTGAAATGTCCAGATATTGAAGTGGCAGTTGTTGATATCTCTGTTCCTA-GAAT 218
Query 203 CAACGCTTGGAACAGTGACCAGCTTCCGATTTACGAGCCTGGTCTTGATGATGTTGTGAA 262
|||||||||||||||||| |||||||||||||||||||| |||||||| ||| | || ||
Sbjct 219 CAACGCTTGGAACAGTGATCAGCTTCCGATTTACGAGCCAGGTCTTGACGATATCGTTAA 278
Query 263 GCAATGCCGTGGAAAGAACCTTTTCTTTAGTACTGATGTTGAGAAACATGTTAGGGAAGC 322
||||||| | |||||||| |||||||| ||||||||||| |||||||||||||| |||||
Sbjct 279 GCAATGCAGAGGAAAGAATCTTTTCTTCAGTACTGATGTGGAGAAACATGTTAGAGAAGC 338
Query 323 TGATATTGTGTTTGTTTCTGTCAATACACCGACGAAAACTAGAGGTCTTGGTGCTGGTAA 382
||||||||| ||||| ||||| || |||||||| ||||| | |||||||| ||||| ||
Sbjct 339 TGATATTGTCTTTGTCTCTGTTAACACACCGACTAAAACGACTGGTCTTGGAGCTGGGAA 398
Query 383 AGCTGCGGATCTTACGTATTGGGAGAGCGCTGCACGTATGATCGCTGATGTGTCGGTATC 442
|||||| ||||| || ||||||||||| ||||| ||||||||||| ||||| ||||| ||
Sbjct 399 AGCTGCTGATCTCACTTATTGGGAGAGTGCTGCTCGTATGATCGCGGATGTATCGGTTTC 458
Query 443 GGATAAGATTGTGGTTGAGAAATCGACTGTTCCGGTTAAAACAGCTGAAGCTATTGAGAA 502
|| |||||||| ||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 459 TGACAAGATTGTTGTTGAGAAATCGACTGTTCCGGTGAAGACAGCTGAAGCTATTGAGAA 518
Query 503 GATTTTGACACATAATAGCAAAGGGATTAAGTTTCAGATTCTTTCGAATCCGGAGTTT-T 561
|||||||| ||||| || ||||| || |||||||||||||||||||||||||||||| |
Sbjct 519 GATTTTGATGCATAACAGTAAAGGAATCAAGTTTCAGATTCTTTCGAATCCGGAGTTTCT 578
Query 562 TGGCGGAAGGAACCGCGATCAAGGATCTTTTTAACCCTGACCGTGTTCTT-ATTGGAGGG 620
| || |||||||| || ||| |||||||||||||||||||||||| || || ||||||
Sbjct 579 T-GCTGAAGGAACTGCTATCGCTGATCTTTTTAACCCTGACCGTGTT-TTGATCGGAGGG 636
Query 621 CGGGAGACCCCGGAAGGGTTTAAAGCGGTGCAGACTCTCAAGGATGTGTATGCTCATTGG 680
|| || || || ||||| || ||||| || ||||| || || || || |||||| |||||
Sbjct 637 CGAGAAACACCTGAAGGATTCAAAGCTGTTCAGACACTTAAAGAGGTTTATGCTAATTGG 696
Query 681 GTTCCTGAAGGCCAAATCATAACCACCAATCTATGGTCTGCTGAGCTTTCCAAGCTT-GC 739
||||||||||| || ||||| || || ||||| ||||||||||||||||| ||| || ||
Sbjct 697 GTTCCTGAAGGTCAGATCATCACAACTAATCTCTGGTCTGCTGAGCTTTCTAAG-TTAGC 755
Query 740 AGCAAACGCTTTCTTGGCTCAAAGGATTTCATCTGTCAATGCTATGTCGGC-TTTATGTG 798
||||| |||||||||||||| ||||||||||| |||||||| ||||| || || ||||
Sbjct 756 TGCAAATGCTTTCTTGGCTCAGAGGATTTCATCAGTCAATGCCATGTCTGCACTT-TGTG 814
Query 799 AAGCCACTGGTGCAGATGTCACGCAAGTGTCTTACGCCGTTGGTACAGACTCGAGAATTG 858
|| |||||||||| ||||| || |||||||||||||| |||||||| || || ||||| |
Sbjct 815 AATCCACTGGTGCTGATGTTACTCAAGTGTCTTACGCTGTTGGTACTGATTCAAGAATCG 874
Query 859 G-TCCTAAGTTCTTGAACTCGAGTGTCGGATTCGGAGGTTCGTGTTTCCAGAAGGATATT 917
| ||| || ||||||||| | ||||| |||||||||||||| |||||||||||||| |||
Sbjct 875 GTTCC-AAATTCTTGAACGCTAGTGTTGGATTCGGAGGTTCTTGTTTCCAGAAGGACATT 933
Query 918 CTGAATCTTGTCTACATCTGTGAGTGCAACGGACTCCCGGAAGTGGCAGAGTACTGGAAA 977
|||||||| |||||||||||| | ||||||||||| || |||||||| || |||||||||
Sbjct 934 CTGAATCTCGTCTACATCTGTCAATGCAACGGACTTCCAGAAGTGGCGGAATACTGGAAA 993
Query 978 CAAGTCATCAAGATCAATGACTACCAGAAGAGCCGGTTCGTGAACCGTGTTGTTTCTTCC 1037
||||| ||||||||||| || ||||| |||| ||||||||||||| | | || || ||
Sbjct 994 CAAGTGATCAAGATCAACGATTACCAAAAGAACCGGTTCGTGAACAGAATCGTGTCCTCT 1053
Query 1038 ATGTTCAACTCCGTATCAAACAAGAAGATTGCGGTTCTCGGTTTCGCATTCAAGAAAGAT 1097
||||||||| | || || ||||||||| ||||| |||| || |||||||||||||||||
Sbjct 1054 ATGTTCAACACTGTCTCCAACAAGAAGGTTGCGATTCTTGGATTCGCATTCAAGAAAGAC 1113
Query 1098 ACAGGTGACACAAGGGAAACTCCAGCCATCGACGTGTGCAAGGGTCT-TCTCGAAGACAA 1156
|| ||||||||||||||||| || ||||| || ||||| || ||||| | | | ||||||
Sbjct 1114 ACTGGTGACACAAGGGAAACACCTGCCATTGATGTGTGTAAAGGTCTAT-TAGGAGACAA 1172
Query 1157 AGCA-AGGCTAAGTATTTACGACCCGCAGGTGACTGAGGATCAGATCCAGAGGGATTTAT 1215
|||| | | | ||||| || || || || || || ||||| ||||| ||||| ||| | |
Sbjct 1173 AGCACA-GATCAGTATCTATGATCCTCAAGTCACAGAGGAACAGATTCAGAGAGATCTCT 1231
Query 1216 CCATGAACAAGTTCGACTGGGACCATCCGCTACATTTGCAGCCAATGAGCCCAACCACAG 1275
| ||||| |||||||||||||||||||| || || |||||||||||||| ||||||||||
Sbjct 1232 CGATGAAAAAGTTCGACTGGGACCATCCTCTTCACTTGCAGCCAATGAGTCCAACCACAG 1291
Query 1276 TGAAACAAGTGAGCGTTACTTGGGACGCATACGAAGCAACTAAGGACGCGCA--CGGTAT 1333
||||||||||||| || |||||||||||||| ||||| || || ||||| || |||| |
Sbjct 1292 TGAAACAAGTGAGTGTGACTTGGGACGCATATGAAGCTACAAAAGACGCACACGCGGT-T 1350
Query 1334 CTGCATCATGACTGAGTGGGATGAGTTCAAGAAC-TTGGACTT-CCAGAAGATCTTTGAC 1391
||| | ||||||||||||| ||||| ||| | || || || |||||||||||| |||
Sbjct 1351 -TGCGTTTTGACTGAGTGGGACGAGTTTAAG-TCGTTAGA-TTACCAGAAGATCTTCGAC 1407
Query 1392 AACATGCAGAAACCGGCTTTCGTGTTCGACGGAAGAAACATTATGAATCTGCAA-AAGCT 1450
|||||||||||||||||||| | |||||||||||||||||||||||| | || ||| |
Sbjct 1408 AACATGCAGAAACCGGCTTTTATCTTCGACGGAAGAAACATTATGAATGT-TAACAAGTT 1466
Query 1451 AAGGGAGATTGGTTTCATTGTTTACTCCATTGGTAAGCCCCTTGACG-ACTGGCTCAAGG 1509
||| ||||||||||||||||||||||||||||||||||| |||||| | ||||||||||
Sbjct 1467 AAGAGAGATTGGTTTCATTGTTTACTCCATTGGTAAGCCACTTGACCCA-TGGCTCAAGG 1525
Query 1510 ACATGCCTGCCGTTGCCTAAT 1530
||||||||||| ||| |||||
Sbjct 1526 ACATGCCTGCCTTTGTCTAAT 1546
> AT5G15490.1 | Symbols: | UDP-glucose 6-dehydrogenase family
protein | chr5:5027639-5030194 REVERSE LENGTH=1781
Length=1781
Score = 1114 bits (603), Expect = 0.0
Identities = 1189/1470 (81%), Gaps = 48/1470 (3%)
Strand=Plus/Plus
Query 84 AAAATGGTGAAGATTTGTTGTATTGGAGCTGGGTATGTTGGTGGACCAACAATGGCAGTG 143
||||||||||||||||| || ||||||||||| ||||||||||| ||||| ||||| ||
Sbjct 103 AAAATGGTGAAGATTTGCTGCATTGGAGCTGGATATGTTGGTGGTCCAACCATGGCTGTC 162
Query 144 ATTGCTTTGAAA-TGTCCAGAC-GTTGAAGTAGCGGTTGTTGATATCTCTGTACCACGTA 201
|||||| | ||| |||||| | ||||||||||| ||||||||||||||||| ||| | |
Sbjct 163 ATTGCTCT-AAAGTGTCCA-TCTGTTGAAGTAGCTGTTGTTGATATCTCTGTGCCAAGGA 220
Query 202 TCAACGCTTGGAACAGTGACCAGCTT-CCGATTTACGAGCCTGGTCTTGATGATGTTGTG 260
|||| || ||||||||||| ||| || ||||| || |||||||||||||||||||| ||
Sbjct 221 TCAATGCCTGGAACAGTGATCAG-TTACCGATCTATGAGCCTGGTCTTGATGATGTCGTT 279
Query 261 AAGCAATGCCGTGGAAAGAACCTTTTCTTTAGTACTGATGTTGAGAAACATGTTAGGGAA 320
||||| |||||||||||||| || ||||| || || ||||||||||||||||| || ||
Sbjct 280 AAGCAGTGCCGTGGAAAGAATCTCTTCTTCAGCACCGATGTTGAGAAACATGTGAGAGAG 339
Query 321 GCTGATATTGTGTTTGTTTCTGTCAATACACCGACGAAAACTAGAGGTCTTGGTGCTGGT 380
||||| ||||| ||||| |||||||| || || || || || | |||||||| |||||
Sbjct 340 GCTGACATTGTTTTTGTGTCTGTCAACACCCCTACTAAGACCCGTGGTCTTGGAGCTGGC 399
Query 381 AAAGCTGCGGATCTT-ACGTATTGGGAGAGCGCTGCACGTATGATCGCTGATGTGTCGGT 439
|||||||||||| || || || |||||||||||||| |||||||| || ||||| |||||
Sbjct 400 AAAGCTGCGGAT-TTGACTTACTGGGAGAGCGCTGCTCGTATGATTGCCGATGTTTCGGT 458
Query 440 ATCGGATAAGATTGTGGTTGAGAAATCGACTGTTCCGGTTAAAACAGCTGAAGCTATTGA 499
|| || |||||||| ||||||||||| |||||||| || ||||| || || || |||||
Sbjct 459 TTCCGACAAGATTGTTGTTGAGAAATCAACTGTTCCTGTCAAAACCGCAGAGGCAATTGA 518
Query 500 GAAGATT-TTGACACATAATAGCAAAGGGATTAAGTTTCAGATTCTTTCGAATCCGGAGT 558
||||||| || ||||| || |||||||| || || || |||||||| || || || ||||
Sbjct 519 GAAGATTCTT-ACACACAACAGCAAAGGAATCAAATTCCAGATTCTGTCAAACCCTGAGT 577
Query 559 T-TTTGGCGGAAGGAACCGCGA-TCAAGGATCTTTTTAACCCTGACCGTGTTCTTATTGG 616
| || || ||||||||||| | | || || ||||| | ||||||||||| || || ||
Sbjct 578 TCCTT-GCTGAAGGAACCGCTATTGAA-GACCTTTTCATGCCTGACCGTGTCCTCATCGG 635
Query 617 AGGGCGGGAGACCCCGGAAGGGTTTAAAGCGGTGC--AGACTCTCAAGGATGTGTATGCT 674
|| || || || | ||||| ||| ||| || | || || | || || | |||||
Sbjct 636 TGGTCGTGAAACAACTGAAGGCTTTGCAGCCGT-CAAAGCCT-TGAAAGACATTTATGCC 693
Query 675 CATTGGGTTCCTGAAGGCCA-AATCATAACCACCAATCTATGGTCTGCTGAGCTTTCCAA 733
|| ||||| |||||| | | |||| | |||||||||||||||||||| |||||||||||
Sbjct 694 CAATGGGTCCCTGAA-GAGAGAATCCTCACCACCAATCTATGGTCTGCCGAGCTTTCCAA 752
Query 734 GCTTGCAGCAAACGCTTTCTTGGCTCAAAGGATTTCATCTGTCAATGCTATGTCGGCTTT 793
||||||||| || || ||| | || || || || ||||| |||||||| ||||| ||| |
Sbjct 753 GCTTGCAGCTAATGCCTTCCTAGCCCAGAGAATCTCATCAGTCAATGCAATGTCCGCTCT 812
Query 794 ATGTGAAGCCACTGGTG-CAGATGTCAC-GCAAGTGTCTTACGCCGTTGGTACAGACTCG 851
||||| || ||||| | || ||||| | | | || ||||| || || || | ||||||
Sbjct 813 CTGTGAGGCAACTGGCGCCA-ATGTCTCAG-AGGTCTCTTATGCTGTGGGCAAAGACTCT 870
Query 852 AGAATTGGTCCTAAGTTCTTGAACTCGAGTGTCGGATTCGGAGGTTCGTGTTTCCAGAAG 911
| |||||||| |||||||||||||| ||||| || |||||||| || |||||||||||
Sbjct 871 CGTATTGGTCCCAAGTTCTTGAACTCTAGTGTTGGGTTCGGAGGATCTTGTTTCCAGAAA 930
Query 912 GATATTCTGAATCTT-GTCTACATCTGTGAGTGCAACGGAC-T-CCCGGAAGTGGCAGAG 968
|||||||| || ||| ||||||||||| || |||||||| | | ||| ||||| || |||
Sbjct 931 GATATTCTCAA-CTTAGTCTACATCTGCGAATGCAACGG-CTTACCC-GAAGTTGCTGAG 987
Query 969 TACTGGAAACAAGTCATCAAGATCAATGACTACCAGAAGAGCCGGTTCGTGAACCGTGTT 1028
|||||||||||||||||||||||||| ||||||||||| | ||| || || ||||| ||
Sbjct 988 TACTGGAAACAAGTCATCAAGATCAACGACTACCAGAAAACCCGATTTGTTAACCGCATT 1047
Query 1029 GTTTCTTCCATGTTCAACTCCGTATCAAACAAGAAGATTGCGGTTCTCGGTTTCGCATTC 1088
|| ||||| ||||| ||| | || || ||||| ||||||||||||||||| ||||| |||
Sbjct 1048 GTCTCTTCAATGTTTAACACAGTCTCCAACAAAAAGATTGCGGTTCTCGGCTTCGCTTTC 1107
Query 1089 AAGAAAGATACAGGTGACACAAGGGAAACTCCAGCCATCGACGTGTGCAAGGGTCT-TCT 1147
|||||||| || || ||||| || || ||||||||||| || || ||||| ||||| | |
Sbjct 1108 AAGAAAGACACTGGAGACACTAGAGAGACTCCAGCCATTGATGTCTGCAAAGGTCTGT-T 1166
Query 1148 CGAAGACAAAGCAAGGCTAAGTATTTACGACCCGCAGGTGACTGAGGATCAGATCCAGAG 1207
| ||||| || | || || || |||||||| || || ||||| || |||||||| ||
Sbjct 1167 AGGTGACAAGGCTCGTCTCAGCATCTACGACCCACAAGTCACTGAAGAGCAGATCCAAAG 1226
Query 1208 GGATTTATCCATGAACAAGTTCGACTGGGACCATCCGCTACATTTGCAGCCAATGAGCCC 1267
|| ||| |||||||||| |||||||||||||| || || ||| | ||||| ||||||||
Sbjct 1227 AGACTTAACCATGAACAAATTCGACTGGGACCACCCACTTCATCTCCAGCCCATGAGCCC 1286
Query 1268 AACCACAGTGAAACAAGTGAGC-GTTACTTGGGACGCATACGAA-GCAACTAAGGACGCG 1325
||||| ||||| ||||| | || |||||||||||||| | ||||| || |||||
Sbjct 1287 CACCACTGTGAAGCAAGTCT-CAGTCGCTTGGGACGCATAC-ACTGCAACCAAAGACGCC 1344
Query 1326 CACGGTATCTGCATCATGACTGAGTGGGATGAGTTCAAGAA-CTTGGACTTCCAGAAGAT 1384
|||||||||||||| | || |||||||| ||||||||||| |||| | |||||| |||
Sbjct 1345 CACGGTATCTGCATTTTAACCGAGTGGGACGAGTTCAAGAAACTTG-ATTTCCAGCGGAT 1403
Query 1385 CTTTGACAACATGCAGAAACCGGCTTTCGTGTTCGACGGAAGAAACATTAT-GAATCTGC 1443
|||||| || ||||||||||||||||| || || ||||| |||||| | | || |||
Sbjct 1404 CTTTGAGAATATGCAGAAACCGGCTTTTGTTTTTGACGGTAGAAACGTGGTCGACGCTG- 1462
Query 1444 A-AAAGCTAAGGGAGATTGG-TTTCATTGTTTACTCCATTGGTAAGCCCCTTG-ACGACT 1500
| ||| || ||||||||||| ||| ||||||||||||||||||||||| ||| || | |
Sbjct 1463 ATAAA-CTCAGGGAGATTGGGTTT-ATTGTTTACTCCATTGGTAAGCCA-TTGGACCAGT 1519
Query 1501 GGCTCAAGGACATGCCTGC-CGTTGCCTAA 1529
||||||||||||||||||| | ||||||||
Sbjct 1520 GGCTCAAGGACATGCCTGCTC-TTGCCTAA 1548
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85642129770
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5