BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg936799
Length=1373
Score E
Sequences producing significant alignments: (Bits) Value
AT3G30280.1 | Symbols: | HXXXD-type acyl-transferase family pr... 1929 0.0
AT4G15390.1 | Symbols: | HXXXD-type acyl-transferase family pr... 1068 0.0
> AT3G30280.1 | Symbols: | HXXXD-type acyl-transferase family
protein | chr3:11914366-11915697 FORWARD LENGTH=1332
Length=1332
Score = 1929 bits (1044), Expect = 0.0
Identities = 1240/1336 (93%), Gaps = 8/1336 (1%)
Strand=Plus/Plus
Query 21 ATGGAGACGATGAAGGTTGAAACCATCGCTAAAGAAATCATAAAACCATCTTCCACAACT 80
|||||||| |||||||| ||||| || ||||| |||||||||||||||||||||||||||
Sbjct 1 ATGGAGACAATGAAGGTAGAAACAATTGCTAAGGAAATCATAAAACCATCTTCCACAACT 60
Query 81 CCAAATGATCTCCAAACTCTCCAACTTTCTATTTATGATCACATTCTCCCTCCTGTTTAC 140
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 61 CCAAATGATCTCCAAACTCTCCAACTCTCTATTTATGATCACATCCTCCCTCCTGTTTAC 120
Query 141 ACAGTCGCATTTCTCTTCTACACAAAAGATGACTTGATCTCTCCAGAACACAGTTCCCAA 200
|||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||| ||
Sbjct 121 ACAGTCGCCTTTCTCTTCTACACAAAAGATGATTTGATCTCTCCTGAACAAAGTTCTCAC 180
Query 201 AAACTCAAGACTTCTC-TGTCCGAAACCTTGACCAAATTCTACCCTCTTGCTGGCAGAAT 259
|||||||||||||||| || ||||||||||||| ||||||||||||||||| ||||||||
Sbjct 181 AAACTCAAGACTTCTCTTG-CCGAAACCTTGACAAAATTCTACCCTCTTGCAGGCAGAAT 239
Query 260 CAACGGCGTCACCATAGATTGTAACAACGAAGGAGCTGTTTTTGTTGACGCTCGTGTCAA 319
||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 240 CAAAGGCGTCACCATCGATTGTAACGACGAAGGAGCTGTTTTTGTTGACGCTCGTGTCAA 299
Query 320 TAACTGTCCTCTCTATGATTTCCTGAGATCTCCGGATTTCAAAACCCTCCAGCAGTTACT 379
||||| |||||||| |||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 300 TAACTATCCTCTCTCTGATTTCCTGAGATCTCCGGATTTTAAAACCCTCCAACAGTTACT 359
Query 380 TCCTCTGGACGTCATCGATGATCCTTACGAGGCAGCTACTACATGGCCTTTGCTGCTAGT 439
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 360 TCCTCTGGACGTCATCGATGATCCTTACGAGGCAGCTACTACATGGCCTTTGCTACTCGT 419
Query 440 GAAGGCGACTTACTTTCCATGTGGTGGCATGGCCATAGGAATCTGCATCACTCACAAAAT 499
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 420 GAAGGCGACTTACTTTCCATGTGGTGGCATGGCCATAGGATTATGCATCACTCACAAAAT 479
Query 500 CGCGGACGCAACCTCCATCTCGACTTTCATTCAGTCTTGGGCTGTTATGGCTCGAGGAGA 559
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 480 CGCGGACGCAACCTCCATCTCAACTTTCATTCAGTCTTGGGCTGCTATGGCTCGAGGAGA 539
Query 560 GGCTGGCGACGCAGTGGCCGGTCCCGAGTTTGCGGCAGCAAATTTCTACCCACCAGCCAA 619
|||||||||| |||||| | ||||| |||||||||||||||||||||||||||||| ||
Sbjct 540 GGCTGGCGACATAGTGGCTGATCCCGTGTTTGCGGCAGCAAATTTCTACCCACCAGCAAA 599
Query 620 TGAGTTATTTAAGTTTCCGGTTGATGAAAATGCCAACAAGATAAGT-AGAATAACGAAGA 678
|||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||
Sbjct 600 TGAGTTATTTAAGTTTCCGGTTGACGAAAATGCCAACAAGATAAGCCA-AATAACGAAGA 658
Query 679 GATTCGTGTTCAGTGCGTCCAAGTTGGAAGAGCTCAGGACCAATGCCGCTAGTGAAGACT 738
||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||
Sbjct 659 GATTCGTGTTCAGTGCGTCTAAGTTGGAAGAGCTCAGGACCAAAGCAGCTAGTGAAGACT 718
Query 739 TTGTAGCCCGACCTACA-CGGGTGGAAAGCGTCACTGCACTTCTTTGGAAAGCCATCGTT 797
|||||| ||| |||| | ||||||||||| |||||||| ||||||||||||||| | |||
Sbjct 719 TTGTAGGCCGGCCTA-AGCGGGTGGAAAGTGTCACTGCGCTTCTTTGGAAAGCCTTTGTT 777
Query 798 GAAGCTGGATCCTCAAACA-ATAATGCTTGTGATATGAAGGTCTTGATCCAGCCCTCTAA 856
| ||||| ||||||||| | | |||||||||||||||||||| |||||||||||||||||
Sbjct 778 GCAGCTGCATCCTCAAATACA-AATGCTTGTGATATGAAGGTATTGATCCAGCCCTCTAA 836
Query 857 CTTGCGCCCCAAGATACCGTCCCTTCTACCTGAAAGCCTGATTGGAAATATAATGTTCTC 916
|||||||||||||||||| || ||| | | ||||||||||| ||||| |||||||||||
Sbjct 837 CTTGCGCCCCAAGATACCTTCTCTTTTGGCAGAAAGCCTGATCGGAAACATAATGTTCTC 896
Query 917 TTCTGTCGTCTTGAGTATTAGTCAAGAAGAGGAAGTTAAAATTGAAAAGGCCGTTAGAGA 976
|||||| |||||| ||||||||||| |||||||| |||||||||||||||| ||| ||||
Sbjct 897 TTCTGTGGTCTTGGGTATTAGTCAACAAGAGGAAATTAAAATTGAAAAGGCAGTTCGAGA 956
Query 977 CTTACGAAAAAAGGGAGATGACTTGCAATATGTAATCAAAGACGAGGGTGGGTCTTCTTC 1036
|||||||||| ||||||||||||||||| ||||||||||||| ||||||||||| |||||
Sbjct 957 CTTACGAAAACAGGGAGATGACTTGCAAAATGTAATCAAAGAAGAGGGTGGGTCGTCTTC 1016
Query 1037 TTCGATGATTGGTTCTAAACTAGCAAATTTAATGCTCACCAATTATTCGCAGTTGAGCTA 1096
| ||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||
Sbjct 1017 TGCGATGATTGGTTCTAAACTAGCAAACCTAATGCTCACTAATTATTCGAAGTTGAGCTA 1076
Query 1097 TGAAACTCACGAGCCCTACACCGTGAGTAGCTGGTGCAAATTACCTCTTTATGAGGCAAG 1156
||| ||||| || ||||||||||||||||||||||||||| |||| ||||||||||| ||
Sbjct 1077 TGAGACTCATGAACCCTACACCGTGAGTAGCTGGTGCAAACTACCCCTTTATGAGGCCAG 1136
Query 1157 TTTTGGATGGGGATCACCGGTTTGGGTTGCCGGTAATGTGGCTCCCATGTTAGACAACGT 1216
||| ||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||
Sbjct 1137 TTTCGGATGGGGATCACCGGTTTGGATTGCCGGTAATGTTGCTCCCATGTTAGAAAACGT 1196
Query 1217 AACTATGTTGATTGATTCCAAGGACGGACAAGGAATTGAAGCGTTTGTCACATTGCCTGA 1276
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1197 AACTATGTTGATTGATTCCAAGGATGGACAAGGAATTGAAGCGTTTGTCACATTGCCCGA 1256
Query 1277 AGAGAACATGATGTCTTTCGAGCAGAACACAGAACTCCTAGCCTTTGCTTCCGTTAATCC 1336
|||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 1257 AGAGAACATGTTGTCTTTAGAGCAGAACACAGAACTCCTAGCCTTTGCTTCCGTGAATCC 1316
Query 1337 TAGTGTCTTGATCTAA 1352
|||||||||| |||||
Sbjct 1317 TAGTGTCTTGGTCTAA 1332
> AT4G15390.1 | Symbols: | HXXXD-type acyl-transferase family
protein | chr4:8792812-8794293 REVERSE LENGTH=1482
Length=1482
Score = 1068 bits (578), Expect = 0.0
Identities = 1109/1357 (82%), Gaps = 69/1357 (5%)
Strand=Plus/Plus
Query 26 GACGATGAAGGTTGAAACCA-TCGCTAAAGAAATCATAAAACCATCTTC-CACAACTCCA 83
|||||||||||||||||||| | | ||||||||||||||| |||||||| | ||||||||
Sbjct 24 GACGATGAAGGTTGAAACCATTAG-TAAAGAAATCATAAAGCCATCTTCGC-CAACTCCA 81
Query 84 AATGATCTCCAAACTCTCCAACTTTCTATTTATGATCACATTCTCCCTCCTGTTTACACA 143
||| ||||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct 82 AATAATCTCCAAACTCTCCAACTCTCAATTTACGATCACATCCTTCCTCCAGTTTACACA 141
Query 144 GTCGCATTTCTCTTCTACA-CAAAAGATGACTTGATCTCTCCAGAACACAGTTCCCAAAA 202
|| || ||||||||||||| ||||| |||| |||||||||| |||||||| |||||| ||
Sbjct 142 GTAGCCTTTCTCTTCTACACCAAAA-ATGATTTGATCTCTCAAGAACACACTTCCCACAA 200
Query 203 ACTCAAGACTTCTCTGTCCGAAACCTTGACCAAATTCTACCCTCTTGCTGGCAGAATCAA 262
|||||||||||||||||| |||||| ||||||| |||||||||||||| || |||||||
Sbjct 201 ACTCAAGACTTCTCTGTCTGAAACCCTGACCAAGTTCTACCCTCTTGCCGGAAGAATCAC 260
Query 263 CGGCGTCACCATAGATTGTAACAACGAAGGAGCTGTTTTTGTTGACGCTCGTGTCAATAA 322
||| || ||| | ||||||| | | ||||||||| | ||||| || ||||||||||||||
Sbjct 261 CGGAGTAACCGTCGATTGTACCGATGAAGGAGCTATCTTTGTCGATGCTCGTGTCAATAA 320
Query 323 CTGTCCTCTCTA-TG-ATTTCCT-GAGAT-CTCCGGATTTCAAAACCCTCCAGCAGTTAC 378
|||||||||| | || |||| || || | | || |||||| | ||||||| ||||| |
Sbjct 321 CTGTCCTCTC-ACTGAATTT-CTCAAG-TGC-CCTGATTTCGACGCCCTCCAACAGTTGC 376
Query 379 TTCCTCTGGACGTCATCGATGATCCTTACGAGGCAGCTACTACATGGCCTTTGCTGCTAG 438
||||||| || || | || | || |||| ||| ||| | || |||||||||||||| |
Sbjct 377 TTCCTCTAGATGTTGTAGACAACCCATACGTGGCTGCTGCCACGTGGCCTTTGCTGCTCG 436
Query 439 TGAAGGCGACTTACTTTC-CATGTGGTGGCATGGCCATAGGAATCTGCATCACTCACAAA 497
||||||| |||||| ||| ||| || |||||||||||||||||||||||||||||||||
Sbjct 437 TGAAGGCAACTTAC-TTCGGATGCGGAGGCATGGCCATAGGAATCTGCATCACTCACAAA 495
Query 498 ATCGCGGACGCAACCTCCATCTCGACTTTCATTCAGTCTTGGGCTGTTATGGCTCGAGGA 557
|||||||||||| ||||||||||||||||||||| ||| ||||| | | ||||||||||
Sbjct 496 ATCGCGGACGCAGCCTCCATCTCGACTTTCATTCGGTCCTGGGCCGCCACGGCTCGAGGA 555
Query 558 GAGG-C--TGGCGAC-GC-AGTGGCCGGTCCCG-AGTTTGC-GGCAGCAAATTTCTACCC 610
||| | || || | || | ||| |||| | | ||||| || || |||||||||||
Sbjct 556 GAGAACGATGCCG-CTGCGA-TGGAAAGTCCTGTA-TTTGCTGGT-GCGAATTTCTACCC 611
Query 611 ACCAGCCAATGAGT-TATTTAAGTTTCCGGTTGATGAA-AATGCCAACAAGATAAGTAGA 668
||||||||||||| | |||||| | || | || ||| || ||| ||||| ||| ||
Sbjct 612 ACCAGCCAATGAGGCT-TTTAAGCTACCTGCGGACGAACAA-GCCGGCAAGAGAAGCAGC 669
Query 669 ATAACGAAGAGATTCGTGTTC-AGTGCGTCCAAGTTGGAAGAGCTCAGGACCAATGCCGC 727
|| || |||||||| |||||| | || || ||| ||||||| ||||||||||| |||||
Sbjct 670 ATTACAAAGAGATTTGTGTTCGAA-GCTTCTAAGGTGGAAGATCTCAGGACCAAAGCCGC 728
Query 728 TAGTGAAGACTTTGTAGCCCGACCTACACGGGTGGAAAGCGTCACTGCACTTCTT-TGGA 786
||||||||| |||| || |||||| |||||||| ||||| ||||| || | | ||||
Sbjct 729 TAGTGAAGAAACAGTAGACCAACCTACGCGGGTGGAGAGCGTTACTGCGCT-CATCTGGA 787
Query 787 AA-GCCATCGTTGAAGCTGGATCCTCAAACAATAA-TGCTTGTGAT-ATGAAG-GTCTTG 842
|| || |||| | | ||||||||| | || | |||||||| | ||| | || |
Sbjct 788 AATGCT-TCGTCG---C---ATCCTCAAAGAC-AACTACTTGTGATCACAAAGTG-CTGG 838
Query 843 ATCCAGCCCT-CTAACTTGCGCCCCAAGATACCGTCCCTTCTACCTGAAAGC-CTGATTG 900
|||||| | |||||||||| |||||||||| |||||||| | |||||| || || |
Sbjct 839 -TCCAGCT-TGCTAACTTGCGGTCCAAGATACCTTCCCTTCTGCAAGAAAGCTCT-ATCG 895
Query 901 GAAATATAATGTTCTCTTCTGTCGTCTTGAGTATTAGTCAAGAAGAGGAAGTTAAAATTG 960
||||| | |||||||||||||| |||||||||||| ||| || || ||||||||||||||
Sbjct 896 GAAATCTCATGTTCTCTTCTGTGGTCTTGAGTATTGGTCGAGGAGGGGAAGTTAAAATTG 955
Query 961 AAAAGGCCGTTAGAGACTTACGAAAAAAG--GGAGATGACTT-GCAATATGTAATCAAAG 1017
|| ||||||||||||||||||||||||| |||| || || | || ||| ||| ||
Sbjct 956 AAGAGGCCGTTAGAGACTTACGAAAAAAAAAGGAG--GAGTTAGGAAC-TGTGATCCTAG 1012
Query 1018 ACGAGGGTGGGTC-T-T--CT--TCTTCGATGATTGGTTCTAAACTAGCAAATTTAATGC 1071
||||||||||||| | | || ||||| ||||| ||||| |||||||||||| | ||||
Sbjct 1013 ACGAGGGTGGGTCATCTGACTCATCTTCCATGATCGGTTCGAAACTAGCAAATCTGATGC 1072
Query 1072 TCACCAATTATTCGCAGTTGAGCTATGAAACTCACGAGCCCTACACCGTGAGTAGCTGGT 1131
||||||| ||||| | |||||||||||| ||||| || ||||| ||||||||||||||||
Sbjct 1073 TCACCAACTATTCTCGGTTGAGCTATGAGACTCATGAACCCTATACCGTGAGTAGCTGGT 1132
Query 1132 GCAAATTACCTCTTTATGAGGCAAGTTTTGGATGGGGAT-CACCGGTTTGGGTTGCCGGT 1190
| || |||||||||| ||||| || |||||||||| || | ||||||||||||| ||
Sbjct 1133 GTAAGCTACCTCTTTACGAGGCTAGCTTTGGATGGG-ATTCTCCGGTTTGGGTTGTTGGG 1191
Query 1191 AATGTGGCTCCCATGTTAGACAACGTAACTATGTTGATTGATTCCAAGGACGGACAAGGA 1250
|||||| | ||| |||||| |||| | | |||||||| |||||||||||||||||||||
Sbjct 1192 AATGTGTCCCCCGTGTTAGGCAACTTGGCCATGTTGATAGATTCCAAGGACGGACAAGGA 1251
Query 1251 ATTGAAGCGTTTGTCACATTGCCTGAAGAGAACATGAT-GTCTTTCGAGCAGAACACAGA 1309
||||||||||| |||||| ||||||||||||||||| | ||| |||||||||||| ||||
Sbjct 1252 ATTGAAGCGTTCGTCACACTGCCTGAAGAGAACATG-TCGTCCTTCGAGCAGAACCCAGA 1310
Query 1310 ACTCCTAGCCTTTGCTTCCGTTAATCCTAGTGTCTTG 1346
| || ||||||||| || | || ||||||||||||
Sbjct 1311 GTTGCTCGCCTTTGCTACCATGAACCCTAGTGTCTTG 1347
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67620134115
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5