BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg936812 Length=514 Score E Sequences producing significant alignments: (Bits) Value AT3G43833.1 | Symbols: | unknown protein; Has 35333 Blast hits... 156 2e-37 > AT3G43833.1 | Symbols: | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr3:15687554-15688773 FORWARD LENGTH=974 Length=974 Score = 156 bits (84), Expect = 2e-37 Identities = 96/102 (94%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 411 AGATTTATTGTAGGGAAGAAGATCTTCTTCGGTGAAGCTAGGCTCACTTTCTCATCTCTT 470 |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct 555 AGATTTATTGTAGGGAAGAAGATCTTCTGCGGTGAAGCTAGGCTCACTTTCGCATCTCTA 614 Query 471 TGTGATATGGGTCGGTGGTTCTAGATCGTCATTGAAGTTCCC 512 |||||||||| | ||||||||| ||||||||||||||||||| Sbjct 615 TGTGATATGGATTGGTGGTTCTCGATCGTCATTGAAGTTCCC 656 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24564497883 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5