BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg936827
Length=1004
Score E
Sequences producing significant alignments: (Bits) Value
ATMG00370.1 | Symbols: ORF199 | Ycf1 protein | chrM:104954-1055... 1066 0.0
AT2G07739.1 | Symbols: | Ycf1 protein | chr2:3495511-3496110 R... 1061 0.0
ATCG01000.1 | Symbols: YCF1.1 | Ycf1 protein | chrC:109405-1104... 946 0.0
ATCG01130.1 | Symbols: YCF1.2 | Ycf1 protein | chrC:123884-1292... 946 0.0
AT5G24065.1 | Symbols: | Pseudogene of AT5G24065 | chr5:813346... 782 0.0
ATCG01140.1 | Symbols: TRNN.2 | tRNA-Asn | chrC:129565-129636 F... 119 6e-26
ATCG00990.1 | Symbols: TRNN.1 | tRNA-Asn | chrC:109013-109084 R... 119 6e-26
ATMG00360.1 | Symbols: TRNC | a mitochondrion-encoded tRNA for ... 115 8e-25
AT2G07764.1 | Symbols: | pre-tRNA | chr2:3496440-3496511 FORWA... 113 3e-24
AT3G32895.1 | Symbols: | transposable element gene | chr3:1343... 104 2e-21
ATMG00380.1 | Symbols: TRNN | tRNA-Asn | chrM:105887-105948 FOR... 95.3 1e-18
> ATMG00370.1 | Symbols: ORF199 | Ycf1 protein | chrM:104954-105553
REVERSE LENGTH=600
Length=600
Score = 1066 bits (577), Expect = 0.0
Identities = 593/600 (99%), Gaps = 3/600 (1%)
Strand=Plus/Plus
Query 388 ATGGTTTTTCAATCTTTTATACTAGGTAATCTAGTATCCTTATGCATGAAGATAATCAAT 447
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1 ATGGTTTTTCAATCTTTTATACTAGGTAATCTAGTATACTTATGCATGAAGATAATCAAT 60
Query 448 TCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCT 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCT 120
Query 508 TATCTCTTCCTTCTCCGAGCTCGGGTTATGGACGAAGGAGAAGAAGGAACCGAGAAGAAA 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TATCTCTTCCTTCTCCGAGCTCGGGTTATGGACGAAGGAGAAGAAGGAACCGAGAAGAAA 180
Query 568 GTATCAGCAACAACTGGTTTTATTGCGGGACAGCTCATGATGTTCATATCGATCTATTAT 627
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GTATCAGCAACAACAGGTTTTATTGCGGGACAGCTCATGATGTTCATATCGATCTATTAT 240
Query 628 GCGCCTCTGCATTTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTAT 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GCGCCTCTGCATTTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTAT 300
Query 688 CTTTTGTTTCA--T-TTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACT 744
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 CTTTTGTTTCATTTCTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACT 360
Query 745 ACCAGAAATGAAATGCGTAATCTTCGCATTCAATGTGTATTCCCGAATAATCTAATTTTT 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 ACCAGAAATGAAATGCGTAATCTTCGCATTCAATGTGTATTCCCGAATAATCTAATTTTT 420
Query 805 AAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGCCAGATTAGTCAACATTTAT 864
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 421 AAATTATTCAACCATTTAATTTTACCAAGTTCAATGTTAGCCAGATTAGTAAACATTTAT 480
Query 865 ATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGTTTGTGTCCGT 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 ATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGTTTGTGTCCGT 540
Query 925 ATGTTACTAGTTGAGTGGGCTTTCCCTTTGTTCCAGTTATTTCTGGTCATGAAGGTGTAG 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 ATGTTACTAGTTGAGTGGGCTTTCCCTTTGTTCCAGTTATTTCTGGTCATGAAGGTGTAG 600
> AT2G07739.1 | Symbols: | Ycf1 protein | chr2:3495511-3496110
REVERSE LENGTH=600
Length=600
Score = 1061 bits (574), Expect = 0.0
Identities = 592/600 (99%), Gaps = 3/600 (1%)
Strand=Plus/Plus
Query 388 ATGGTTTTTCAATCTTTTATACTAGGTAATCTAGTATCCTTATGCATGAAGATAATCAAT 447
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1 ATGGTTTTTCAATCTTTTATACTAGGTAATCTAGTATACTTATGCATGAAGATAATCAAT 60
Query 448 TCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCT 507
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 61 TCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTTT 120
Query 508 TATCTCTTCCTTCTCCGAGCTCGGGTTATGGACGAAGGAGAAGAAGGAACCGAGAAGAAA 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TATCTCTTCCTTCTCCGAGCTCGGGTTATGGACGAAGGAGAAGAAGGAACCGAGAAGAAA 180
Query 568 GTATCAGCAACAACTGGTTTTATTGCGGGACAGCTCATGATGTTCATATCGATCTATTAT 627
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 GTATCAGCAACAACAGGTTTTATTGCGGGACAGCTCATGATGTTCATATCGATCTATTAT 240
Query 628 GCGCCTCTGCATTTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTAT 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GCGCCTCTGCATTTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTAT 300
Query 688 CTTTTGTTTCA--T-TTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACT 744
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 CTTTTGTTTCATTTCTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACT 360
Query 745 ACCAGAAATGAAATGCGTAATCTTCGCATTCAATGTGTATTCCCGAATAATCTAATTTTT 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 ACCAGAAATGAAATGCGTAATCTTCGCATTCAATGTGTATTCCCGAATAATCTAATTTTT 420
Query 805 AAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGCCAGATTAGTCAACATTTAT 864
||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 421 AAATTATTCAACCATTTAATTTTACCAAGTTCAATGTTAGCCAGATTAGTAAACATTTAT 480
Query 865 ATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGTTTGTGTCCGT 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 ATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGTTTGTGTCCGT 540
Query 925 ATGTTACTAGTTGAGTGGGCTTTCCCTTTGTTCCAGTTATTTCTGGTCATGAAGGTGTAG 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 ATGTTACTAGTTGAGTGGGCTTTCCCTTTGTTCCAGTTATTTCTGGTCATGAAGGTGTAG 600
> ATCG01000.1 | Symbols: YCF1.1 | Ycf1 protein | chrC:109405-110436
FORWARD LENGTH=1032
Length=1032
Score = 946 bits (512), Expect = 0.0
Identities = 526/533 (99%), Gaps = 0/533 (0%)
Strand=Plus/Plus
Query 385 GTGATGGTTTTTCAATCTTTTATACTAGGTAATCTAGTATCCTTATGCATGAAGATAATC 444
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTGATGGTTTTTCAATCTTTTATACTAGGTAATCTAGTATCCTTATGCATGAAGATAATA 60
Query 445 AATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCC 504
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 61 AATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTTTCCATAGGGCCC 120
Query 505 TCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGACGAAGGAGAAGAAGGAACCGAGAAG 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGACGAAGGAGAAGAAGGAACCGAGAAG 180
Query 565 AAAGTATCAGCAACAACTGGTTTTATTGCGGGACAGCTCATGATGTTCATATCGATCTAT 624
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AAAGTATCAGCAACAACAGGTTTTATTGCGGGACAGCTCATGATGTTCATATCGATCTAT 240
Query 625 TATGCGCCTCTGCATTTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCG 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TATGCGCCTCTGCATTTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCG 300
Query 685 TATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACT 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACT 360
Query 745 ACCAGAAATGAAATGCGTAATCTTCGCATTCAATGTGTATTCCCGAATAATCTAATTTTT 804
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 361 ACCAGAAATGAAATGCGTAATCTTCGCATTCAATGTGTATTCCTGAATAATCTCATTTTT 420
Query 805 AAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGCCAGATTAGTCAACATTTAT 864
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 CAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGCCAGATTAGTCAACATTTAT 480
Query 865 ATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGTTTG 917
||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 481 ATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGGTTG 533
> ATCG01130.1 | Symbols: YCF1.2 | Ycf1 protein | chrC:123884-129244
REVERSE LENGTH=5361
Length=5361
Score = 946 bits (512), Expect = 0.0
Identities = 526/533 (99%), Gaps = 0/533 (0%)
Strand=Plus/Plus
Query 385 GTGATGGTTTTTCAATCTTTTATACTAGGTAATCTAGTATCCTTATGCATGAAGATAATC 444
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTGATGGTTTTTCAATCTTTTATACTAGGTAATCTAGTATCCTTATGCATGAAGATAATA 60
Query 445 AATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCC 504
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 61 AATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGACCACATTTTCCATAGGGCCC 120
Query 505 TCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGACGAAGGAGAAGAAGGAACCGAGAAG 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 TCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGACGAAGGAGAAGAAGGAACCGAGAAG 180
Query 565 AAAGTATCAGCAACAACTGGTTTTATTGCGGGACAGCTCATGATGTTCATATCGATCTAT 624
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AAAGTATCAGCAACAACAGGTTTTATTGCGGGACAGCTCATGATGTTCATATCGATCTAT 240
Query 625 TATGCGCCTCTGCATTTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCG 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TATGCGCCTCTGCATTTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCG 300
Query 685 TATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACT 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACT 360
Query 745 ACCAGAAATGAAATGCGTAATCTTCGCATTCAATGTGTATTCCCGAATAATCTAATTTTT 804
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 361 ACCAGAAATGAAATGCGTAATCTTCGCATTCAATGTGTATTCCTGAATAATCTCATTTTT 420
Query 805 AAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGCCAGATTAGTCAACATTTAT 864
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 CAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGCCAGATTAGTCAACATTTAT 480
Query 865 ATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGTTTG 917
||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 481 ATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGGTTG 533
> AT5G24065.1 | Symbols: | Pseudogene of AT5G24065 | chr5:8133460-8134077
FORWARD LENGTH=618
Length=618
Score = 782 bits (423), Expect = 0.0
Identities = 525/573 (92%), Gaps = 11/573 (2%)
Strand=Plus/Plus
Query 346 AATCCAGAAATTGAAATAGAAAAGAAAAAAGGGAGGTTTGTGATGGTTTTTCAATCTTTT 405
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AATCCAAAAATTGAAATAGAAAAGAAAAAAGGGAGGTTTGTGATGGTTTTTCAATCTTTT 60
Query 406 ATACTAGGTAATCTAGTATCCTTATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGA 465
||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||
Sbjct 61 ATACTAGGTAATCTAGTATCCTTATACATGAAGATAATAAATTCGGTCATTGTGGTCGGA 120
Query 466 CTCTATTATGGATTTCTGACCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGA 525
|| ||||||| ||||||||||| ||| || ||||| |||||||||||||| |||||||||
Sbjct 121 CTTTATTATGAATTTCTGACCATATTTTCTATAGGACCCTCTTATCTCTTTCTTCTCCGA 180
Query 526 GCTCGGGTTATGGACGAAGGAGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAAC-TGG 584
| | || |||||||||| || || || ||| |||||||||||| |||||||| ||
Sbjct 181 G-T----TT--GGACGAAGGAAAACAAAGA-CCGGGAAGAAAGTATC-GCAACAACATG- 230
Query 585 TTTTATTGCGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATTTAGC 644
|||||||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||
Sbjct 231 TTTTATTGCGGGACAGCTTATGATGTTCATATCAATCTATTATGCGCTTCTGCTTTTAGT 290
Query 645 ATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTTGTTTCATTTCTT 704
|||||||| |||||||||||||||| | |||||||||||||||||||| |||||||||||
Sbjct 291 ATTGGGTAAACCTCATACAATAACTCTTCTAGCTCTACCGTATCTTTTATTTCATTTCTT 350
Query 705 CTGGAACAATCACAAACACTTTTTTGATTATGGATCTACTACCAGAAATGAAATGCGTAA 764
|| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 351 TTGAAACAATCACAAACACTTTTTTGATTATAGATCTACTACCAGAAATGAAATGCGTAA 410
Query 765 TCTTCGCATTCAATGTGTATTCCCGAATAATCTAATTTTTAAATTATTCAACCATTTCAT 824
|||| |||||||||||||||||| ||||||||| |||||| |||||||||||||||||||
Sbjct 411 TCTTTGCATTCAATGTGTATTCCTGAATAATCTCATTTTTCAATTATTCAACCATTTCAT 470
Query 825 TTTACCAAGTTCAATGTTAGCCAGATTAGTCAACATTTATATGTTTCGATGCAACAACAA 884
|||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct 471 TTTACCAATTTCAATGTTAGCCAGATTAGTCAATATTTATATGTTTCGATGTAACAATAA 530
Query 885 GATGTTATTTGTAACAAGTAGTTTTGTTGTTTG 917
|||||||||||||||||||||||||||| |||
Sbjct 531 AATGTTATTTGTAACAAGTAGTTTTGTTGGTTG 563
> ATCG01140.1 | Symbols: TRNN.2 | tRNA-Asn | chrC:129565-129636
FORWARD LENGTH=72
Length=72
Score = 119 bits (64), Expect = 6e-26
Identities = 64/64 (100%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 1 GTAGGATTCGAACCTACGACCAATCAGTTAACAGCCGACCGCTCTACCACTGAGCTACTG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 64 GTAGGATTCGAACCTACGACCAATCAGTTAACAGCCGACCGCTCTACCACTGAGCTACTG 5
Query 61 AGGA 64
||||
Sbjct 4 AGGA 1
> ATCG00990.1 | Symbols: TRNN.1 | tRNA-Asn | chrC:109013-109084
REVERSE LENGTH=72
Length=72
Score = 119 bits (64), Expect = 6e-26
Identities = 64/64 (100%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 1 GTAGGATTCGAACCTACGACCAATCAGTTAACAGCCGACCGCTCTACCACTGAGCTACTG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 64 GTAGGATTCGAACCTACGACCAATCAGTTAACAGCCGACCGCTCTACCACTGAGCTACTG 5
Query 61 AGGA 64
||||
Sbjct 4 AGGA 1
> ATMG00360.1 | Symbols: TRNC | a mitochondrion-encoded tRNA for
cysteine | chrM:104885-104995 FORWARD LENGTH=111
Length=111
Score = 115 bits (62), Expect = 8e-25
Identities = 62/62 (100%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 943 GCTTTCCCTTTGTTCCAGTTATTTCTGGTCATGAAGGTGTAGGCCAAGGACGGAGTCGAA 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 111 GCTTTCCCTTTGTTCCAGTTATTTCTGGTCATGAAGGTGTAGGCCAAGGACGGAGTCGAA 52
Query 1003 CC 1004
||
Sbjct 51 CC 50
> AT2G07764.1 | Symbols: | pre-tRNA | chr2:3496440-3496511 FORWARD
LENGTH=72
Length=72
Score = 113 bits (61), Expect = 3e-24
Identities = 63/64 (98%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 1 GTAGGATTCGAACCTACGACCAATCAGTTAACAGCCGACCGCTCTACCACTGAGCTACTG 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 64 GTAGGATTTGAACCTACGACCAATCAGTTAACAGCCGACCGCTCTACCACTGAGCTACTG 5
Query 61 AGGA 64
||||
Sbjct 4 AGGA 1
> AT3G32895.1 | Symbols: | transposable element gene | chr3:13431016-13435542
FORWARD LENGTH=4527
Length=4527
Score = 104 bits (56), Expect = 2e-21
Identities = 56/56 (100%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 666 AACTGTCCTAGCTCTACCGTATCTTTTGTTTCATTTCTTCTGGAACAATCACAAAC 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3152 AACTGTCCTAGCTCTACCGTATCTTTTGTTTCATTTCTTCTGGAACAATCACAAAC 3207
> ATMG00380.1 | Symbols: TRNN | tRNA-Asn | chrM:105887-105948 FORWARD
LENGTH=62
Length=62
Score = 95.3 bits (51), Expect = 1e-18
Identities = 53/54 (98%), Gaps = 0/54 (0%)
Strand=Plus/Minus
Query 1 GTAGGATTCGAACCTACGACCAATCAGTTAACAGCCGACCGCTCTACCACTGAG 54
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 54 GTAGGATTTGAACCTACGACCAATCAGTTAACAGCCGACCGCTCTACCACTGAG 1
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 49179229913
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5