BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg936830 Length=518 Score E Sequences producing significant alignments: (Bits) Value ATMG01030.1 | Symbols: ORF106E | hypothetical protein | chrM:26... 593 4e-169 AT2G07673.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 588 2e-167 > ATMG01030.1 | Symbols: ORF106E | hypothetical protein | chrM:264113-264433 REVERSE LENGTH=321 Length=321 Score = 593 bits (321), Expect = 4e-169 Identities = 321/321 (100%), Gaps = 0/321 (0%) Strand=Plus/Plus Query 177 ATGCAACAGGTATTCCGTAGAGAAGGTATAAATCTATACTATTATTCAAACAAAACAAAG 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGCAACAGGTATTCCGTAGAGAAGGTATAAATCTATACTATTATTCAAACAAAACAAAG 60 Query 237 AAGTTCTCTCTTGACTCTTGGTACCTGCCTCAGCTGCACCTACTCGAAAGCAAAGGAAAC 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AAGTTCTCTCTTGACTCTTGGTACCTGCCTCAGCTGCACCTACTCGAAAGCAAAGGAAAC 120 Query 297 AAGAAAAGCAAGGCAGCTACGGACCAATACTTCATACATCCTTCCCGGACGAGACAAGAA 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 AAGAAAAGCAAGGCAGCTACGGACCAATACTTCATACATCCTTCCCGGACGAGACAAGAA 180 Query 357 AGGGATCTTACAGACAGGAAGCACCGCCCGGAACAGCAACAACTACAACGACGGGTAACT 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AGGGATCTTACAGACAGGAAGCACCGCCCGGAACAGCAACAACTACAACGACGGGTAACT 240 Query 417 CGCTGGAAAAAAGAAGTCACAACTAGATCAAGACCTAAGGAGACTTCGAGCACACATCTT 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CGCTGGAAAAAAGAAGTCACAACTAGATCAAGACCTAAGGAGACTTCGAGCACACATCTT 300 Query 477 CCCTATCACGGCTCATACTAA 497 ||||||||||||||||||||| Sbjct 301 CCCTATCACGGCTCATACTAA 321 > AT2G07673.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:ATMG01030.1); Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:3266578-3266898 FORWARD LENGTH=321 Length=321 Score = 588 bits (318), Expect = 2e-167 Identities = 320/321 (99%), Gaps = 0/321 (0%) Strand=Plus/Plus Query 177 ATGCAACAGGTATTCCGTAGAGAAGGTATAAATCTATACTATTATTCAAACAAAACAAAG 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGCAACAGGTATTCCGTAGAGAAGGTATAAATCTATACTATTATTCAAACAAAACAAAG 60 Query 237 AAGTTCTCTCTTGACTCTTGGTACCTGCCTCAGCTGCACCTACTCGAAAGCAAAGGAAAC 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AAGTTCTCTCTTGACTCTTGGTACCTGCCTCAGCTGCACCTACTCGAAAGCAAAGGAAAC 120 Query 297 AAGAAAAGCAAGGCAGCTACGGACCAATACTTCATACATCCTTCCCGGACGAGACAAGAA 356 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 121 AAGAAAAGCAAGGCAGCTATGGACCAATACTTCATACATCCTTCCCGGACGAGACAAGAA 180 Query 357 AGGGATCTTACAGACAGGAAGCACCGCCCGGAACAGCAACAACTACAACGACGGGTAACT 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AGGGATCTTACAGACAGGAAGCACCGCCCGGAACAGCAACAACTACAACGACGGGTAACT 240 Query 417 CGCTGGAAAAAAGAAGTCACAACTAGATCAAGACCTAAGGAGACTTCGAGCACACATCTT 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CGCTGGAAAAAAGAAGTCACAACTAGATCAAGACCTAAGGAGACTTCGAGCACACATCTT 300 Query 477 CCCTATCACGGCTCATACTAA 497 ||||||||||||||||||||| Sbjct 301 CCCTATCACGGCTCATACTAA 321 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24765434471 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5