BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg936938 Length=1625 Score E Sequences producing significant alignments: (Bits) Value AT3G43270.1 | Symbols: | Plant invertase/pectin methylesterase... 2447 0.0 > AT3G43270.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr3:15222125-15225460 REVERSE LENGTH=2197 Length=2197 Score = 2447 bits (1325), Expect = 0.0 Identities = 1529/1629 (94%), Gaps = 8/1629 (0%) Strand=Plus/Plus Query 1 CAAGATTCTACCGGAGATAGATGGCGAAGTTCCTACAAATGGGTTCATCAATCTTCTTCT 60 |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 317 CAAGATTCTACCTGAGATAGATGGCGAAGTTCCGACAAATGGGTTCATCAATCTTCTTCC 376 Query 61 TCTTTCTTATCACCGTTTCTTTATGTTCCGCCCACAAAGAGGCGTTTTCTTCTACTGGGT 120 |||||||||||| | || |||||||||||||||||||| ||||||||||| ||| | | Sbjct 377 TCTTTCTTATCATAATCTCATTATGTTCCGCCCACAAAGAAGCGTTTTCTTCAACT-GAT 435 Query 121 -TGGTTCAAATGGAGTGCTTGAAAGTCCCGCCGTTAGAGTTCGCCCAAGCGGCCAAAACC 179 | ||||||||||||||||||| |||||| ||||||||||| || |||||||||||||| Sbjct 436 CTTGTTCAAATGGAGTGCTTGAGAGTCCCACCGTTAGAGTTTGCTGAAGCGGCCAAAACC 495 Query 180 GTCGTTGATGCTAT-CCAAAAGGCGGTAGCTATAGTTTCAAACTTCGACAAGAAAGTCGG 238 ||||| || ||||| ||||| |||||||||||||| || || ||||||||||||| ||| Sbjct 496 GTCGTCGACGCTATAACAAAA-GCGGTAGCTATAGTGTCCAAGTTCGACAAGAAAGCCGG 554 Query 239 GAAGTCACGAGTGTCCAATGCGATTCTTGATTGTGTTGATCTTCTTGATTCTGCCGCCGA 298 |||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 555 GAAGTCGCGAGTCTCCAATGCGATTGTTGATTGTGTTGATCTTCTTGATTCTGCCGCCGA 614 Query 299 AGAGCTTTCTTGGATCATCTCTGCCTCTCAAAATCCCAACGGTAAAGACAACAGTACAGG 358 ||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct 615 AGAGCTTTCTTGGATCATCTCTGCCTCTCAATCCCCCAACGGTAAAGACAATAGCACAGG 674 Query 359 AGACGTGGGTTCGGATCTAAGGACATGGATAAGCGCCGCACTTTCTAACCAGGACACGTG 418 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 675 AGACGTGGGTTCGGATCTAAGGACATGGATAAGCGCCGCACTTTCTAACCAGGACACATG 734 Query 419 TCTTGACGGCTTCGATGGTACTAATGGAATTATCAAAAAGATAGTGGCTGGTGGTCTTAG 478 ||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct 735 TCTTGACGGTTTCGAGGGTACTAATGGAATTATCAAAAAGATAGTGGCCGGTGGTCTTAG 794 Query 479 C-CGCGTCGGTACGACCGTCCGAAATCTACTAACGATGGTTCACTCTCCTCCCTCTAAGC 537 | | || ||||||||||| || ||| ||||||||||||||||||||||||||||||||| Sbjct 795 CAAG-GTTGGTACGACCGTTCGGAATTTACTAACGATGGTTCACTCTCCTCCCTCTAAGC 853 Query 538 CCAAACCCAAGCCCATTAAAGCCCACACGATGACAAAAGCTCATAGTGGCTTCAGTAAGT 597 ||||||| ||||||||||| ||||| || ||||| ||||||||||||||||||||||||| Sbjct 854 CCAAACCTAAGCCCATTAAGGCCCAGACAATGACGAAAGCTCATAGTGGCTTCAGTAAGT 913 Query 598 TTCCCTCGTGGGTTAAACCTGGTGATCGGAAGTTGTTGCAAACTGATAACATAACGGTTG 657 | ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 914 TCCCCTCATGGGTTAAACCCGGTGATCGGAAGTTGTTGCAAACTGATAACATAACGGTTG 973 Query 658 CTGACGCGGTTGTAGCCGCAGACGGGACCGGGAATTTCACGACGATAAGTGACGCAGTGT 717 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct 974 CTGACGCGGTTGTAGCCGCAGACGGGACCGGAAATTTCACGACGATAAGTGACGCGGTGT 1033 Query 718 TGGCTGCACCGGATTATAGTACCAAAAGATATGTGATACATGTGAAAAGAGGTGTATATG 777 ||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| |||| Sbjct 1034 TGGCTGCACCGGACTATAGTACCAAAAGATATGTCATACATGTAAAAAGAGGTGTGTATG 1093 Query 778 -AGGAGAATGTGGAGATTAAAAAGAAGAAATGGAACATTATGATTGTTGGTGATGGCATC 836 | ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 1094 TA-GAGAATGTGGAGATTAAAAAGAAGAAATGGAACATTATGATGGTTGGTGACGGCATC 1152 Query 837 GATGCCACCGTGATCACCGGTAACCGGAGTTTCATCGACGGCTGGACTACTTTCCGGTCA 896 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 1153 GATGCCACCGTGATCACGGGTAACCGGAGTTTCATCGACGGCTGGACTACTTTCCGATCT 1212 Query 897 GCTACTTTTGCTGTGAGCGGTAGAGGGTTTATTGGGCGCGATATCACCTTCCAAAACACA 956 ||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct 1213 GCTACATTTGCTGTGAGCGGTAGAGGATTTATTGCACGCGATATCACCTTCCAAAACACA 1272 Query 957 GCAGGACCGGAAAAGCACCAAGCGGTCGCAATCCGATCCGATACGGATCTCGGGGTCTTT 1016 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1273 GCAGGACCGGAAAAACACCAAGCGGTCGCAATCCGATCCGATACGGATCTCGGGGTCTTT 1332 Query 1017 TATCGATGCGCGATGAGAGGTTACCAAGACACTCTCTATGCCCACTCAATGCGTCAATTC 1076 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1333 TATCGATGCGCGATGAGAGGTTACCAAGACACTCTCTATGCCCACTCAATGCGTCAATTC 1392 Query 1077 TTTAGAGAATGCATTATAACCGGCACTGTAGACTTTATATTCGGAGACGCCACTGCCGTA 1136 |||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||| Sbjct 1393 TTTAGAGAATGCATTATAACAGGCACTGTAGACTTTATATTCGGAGACGCCACAGCAGTA 1452 Query 1137 TTCCAAAGTTGCCAAATCAAAGCCAAACAAGGCCTTCCAAACCAGAAGAATAGCATCACG 1196 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1453 TTCCAAAGCTGCCAAATCAAAGCCAAACAAGGCCTTCCAAACCAGAAGAATAGCATCACG 1512 Query 1197 GCGCAAGGACGTAAGGATCCAAATGAGCCAACAGGATTCACATTCCAATTCAGCAATATA 1256 || ||||||||||||||||||||||||||||| || |||||| ||||||||||||||||| Sbjct 1513 GCTCAAGGACGTAAGGATCCAAATGAGCCAACCGGTTTCACAATCCAATTCAGCAATATA 1572 Query 1257 GTGGCTGATACCGACCTACTTCCAAACTCAAATATTACGGCTACTTACTTAGGTCGACCG 1316 | ||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| ||| Sbjct 1573 GCAGCTGATACCGACCTACTTCTAAACTTAAATACTACGGCTACTTACTTAGGTCGGCCG 1632 Query 1317 TGGAAATTATATTCTAGAACGGTGTTCATGCAAAACTACATGAGCGATGCAATCAATCCC 1376 |||||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct 1633 TGGAAACTATATTCTAGGACGGTGTTCATGCAAAACTACATGAGTGATGCAATCAACCCC 1692 Query 1377 GAAGGATGGCTCGAATGGAACGGAAATTTTGCGTTGGATACATTATATTATGGTGAGTAT 1436 | ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1693 GTAGGATGGCTTGAATGGAATGGAAATTTTGCGTTGGATACATTATATTATGGTGAGTAT 1752 Query 1437 ATGAATAGCGGACCGGGTGCTAGTCTTGACCGCCGTGTTAAGTGGCCAGGATACCATGTG 1496 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1753 ATGAATAGCGGACCGGGGGCTAGTCTTGACCGCCGTGTTAAGTGGCCAGGATACCATGTG 1812 Query 1497 TTGAACACTCCGGCCGAGGCTAATAATTTTACGGTATCTCAACTCATACAAGGGAACCTG 1556 ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct 1813 TTGAATACTTCGGCCGAGGCTAATAATTTTACAGTATCTCAACTCATACAAGGGAACTTG 1872 Query 1557 TGGTTACCATCTACTGGTATCACGTTCATTGCTGGTCTAGTCTCGTAAATTAATCATGTT 1616 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1873 TGGTTACCATCAACTGGTATCACGTTCATTGCTGGTCTAGTCTCGTAAATTAATCATGTT 1932 Query 1617 TGATCGAAT 1625 ||||||||| Sbjct 1933 TGATCGAAT 1941 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80270671455 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5