BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg936962
Length=1291
Score E
Sequences producing significant alignments: (Bits) Value
AT3G43700.1 | Symbols: ATBPM6, BPM6 | BTB-POZ and MATH domain 6... 1971 0.0
AT5G21010.1 | Symbols: ATBPM5, BPM5 | BTB-POZ and MATH domain 5... 965 0.0
AT3G03740.1 | Symbols: ATBPM4, BPM4 | BTB-POZ and MATH domain 4... 351 7e-96
> AT3G43700.1 | Symbols: ATBPM6, BPM6 | BTB-POZ and MATH domain
6 | chr3:15601868-15603888 FORWARD LENGTH=1713
Length=1713
Score = 1971 bits (1067), Expect = 0.0
Identities = 1212/1282 (95%), Gaps = 10/1282 (1%)
Strand=Plus/Plus
Query 13 AATCCCAAATGTCAAGGCTAATGACCAGACCCAGCCGATCATCAAGCCCCAATACGAATC 72
||| ||||||||||| ||||||||||||| ||||| |||||||||||||||| |||| ||
Sbjct 70 AAT-CCAAATGTCAAAGCTAATGACCAGAACCAGCGGATCATCAAGCCCCAACACGATTC 128
Query 73 CAGATCGAATCGAATCACCAACAAGCTCAAGATCGGTGACGCAGACGACAAACGGATCGC 132
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 129 CAGACCAAATCGAATCACCAACAAGCTCAAGATCGGTGACGCAGACGACAAACGGATCGC 188
Query 133 ACCAATTCGTGATCCAAGGATACAGTTTAGCTAAAGGAATCGGAGTAGGGAAACACATAG 192
||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 189 ACCAATTCGTGATACAAGGATACAGTTTAGCTAAAGGAATTGGTGTAGGGAAACACATAG 248
Query 193 CAAGTGATAATTTCTCCGTCGGAGGTTATCAATGGACTATCTTTGTCTACCCAGATGGTA 252
||||||||||||||||||| ||||||||||||||||||||||| |||||||| || ||||
Sbjct 249 CAAGTGATAATTTCTCCGTAGGAGGTTATCAATGGACTATCTTCGTCTACCCTGACGGTA 308
Query 253 AAAATCCAGAAGATAACTCTTCTTACGTCTCTGTGTTCATCGTTTTGGCTAGTGAAGGTA 312
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 309 AAAATCCAGAGGATAACTCTTCTTACGTCTCTGTGTTCATCGTTTTGGCTAGTGAATGTA 368
Query 313 CTGAAGTTAGAGCGCTTTTTGAGCTTGCTCTTGTTGATCAAAGTGGTAAAGGGAAGCATA 372
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 369 CTGAAGTTAGAGCGCTTTTTGAGCTTTCTCTTGTTGATCAAAGTGGTAAAGGGAAGCATA 428
Query 373 AGGTTCATAGCCATTTCGATCGGTCGCTTGATGGTGGTCCTTACACGCTTAAATATAGAG 432
|||||||||||||||| |||| || ||||||||||||||||| |||||||| || ||||
Sbjct 429 AGGTTCATAGCCATTTTAATCGTTCACTTGATGGTGGTCCTTATACGCTTAAGTACAGAG 488
Query 433 GAAGTATGTGGGGATACAAGCGTTTCTTCAGACGTTCCTTGCTTGAGACATCTGACTACC 492
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 489 GAAGTATGTGGGGATACAAGCGTTTCTTCAGACGGTCCTTGCTTGAGACATCTGACTATC 548
Query 493 TTAAAGACGATTGCTTGAAAATCAATTGTACAGTTGGAGTTGTCGTTTCAGAAATACATT 552
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 549 TTAAAGACGATTGCTTGAAAATTAATTGTACAGTTGGAGTTGTCGTTTCAGAAATGCATT 608
Query 553 GCCCACGATTACTCTCGATTCATGTCCCAGACTCAGAACTTGGATCACATTTTGGAAAGT 612
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 609 GCCCACGGTTACTCTCGATTCATGTCCCAGACTCAGAACTTGGATCACATTTTGGAAAGT 668
Query 613 TGCTGGATACTTTAGAAGGTTCAGATGTCACATTTGACATTGCTGGTGAGAAGTTTCAAG 672
|||||||||||||| |||| || ||||||||||||||| |||| ||||||||||||||||
Sbjct 669 TGCTGGATACTTTACAAGGCTCGGATGTCACATTTGACGTTGCCGGTGAGAAGTTTCAAG 728
Query 673 CTCATAAATTGGTTTTGGCTGCACGATCTCAGTTTTTCAGATCGAA-GTTTTACAATGTC 731
||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
Sbjct 729 CTCATAAATTGGTTTTGGCTGCACGATCTCAGTTTTTCAGATC-AATGTTTTACAAT-AC 786
Query 732 -CCAGAAGCA-AACAACAACGAGGTAGCGATCAGCAATTTGGAACCTAAGGTTTTCAAGG 789
| || || | ||||||| ||| |||| ||||||| ||||||||||||||||||||||||
Sbjct 787 TCTAGCAG-AGAACAACAGCGACGTAGTGATCAGCGATTTGGAACCTAAGGTTTTCAAGG 845
Query 790 CCTTGTTACACTTCATGTATAAAGATTCTCTCCCAGGAGATGTGGAACCAGTAACGGCTC 849
|||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 846 CCTTGTTACACTTCATGTATAAAGATTCCCTCCCAGGAGATGTGGAACCATTAACGGCTC 905
Query 850 ATTCATTTGACCTATTAAGGCTGTCCGAAATAGATGATACACTGATTGTAAAGCTTCTGG 909
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 906 ATTCATTTGACCTATTAAGGCCGTCCGAAATAGATGATACACTGATTGTAAAGCTTCTGG 965
Query 910 CAGCTGCGGAAATGTACAATCTGAGTAGGCTCAGATTATTGTGTGAATCTCACATCTGCA 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 966 CAGCTGCGGAAATGTACAATCTGAGTAGGCTCAGATTATTGTGTGAATCTCACATCTGCA 1025
Query 970 AAGCCGTATCTATCAGCTCCGTATCCAAGATCTTAGCTTTATCCGACAAATATAATGCAA 1029
||| | |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1026 AAGGCATATCTATCAGCTCCGTGTCCAAGATCTTAGCTTTATCCGACAAATATAATGCAT 1085
Query 1030 CTGAACTAAAAAGCGTATCCCTAAAATTCACTGCAGAAAACCTAGCAGCTGTTCTGCAGA 1089
| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1086 CCGAACTAAAAAGCGTTTCCTTAAAATTCACTGCAGAAAACCTAGCAGCTGTTCTGCAGA 1145
Query 1090 CAAAAGCTTATGAAGATCTGAAGGATGACTATCCAAACCTCCAGTCTGAGCTACTAAAGG 1149
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1146 CAAAAGCATATGAAGATCTGAAGGATGACTGTCCAAACCTCCAGTCTGAGCTACTAAAGG 1205
Query 1150 CGGTGGCTGGTTATGACGAAACAAGTAGCAGCGGAGGAGGAAAGTCTCAGAGTGTTTGGG 1209
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1206 CGGTCGCTGGTTATGACGACACAAGTAGCAGCGGAGGAGGAAAGTCTCAGAGTGTTTGGG 1265
Query 1210 CCCAACTCTCTGACGGTGGTGAGACCAGCAGCCGAAGAGTCAGGCAGCGAACCACTTAGA 1269
| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 1266 CTCAACTCTCTAACGGTGGTGAGACCAGTAGCCGAAGGGTCAGGCAGCGAACCACTTAGA 1325
Query 1270 AGAGCTTCTTCTTCACATGTTG 1291
|| |||||||| ||||||||
Sbjct 1326 AGTGCTTCTTC---ACATGTTG 1344
> AT5G21010.1 | Symbols: ATBPM5, BPM5 | BTB-POZ and MATH domain
5 | chr5:7136009-7138681 FORWARD LENGTH=1593
Length=1593
Score = 965 bits (522), Expect = 0.0
Identities = 1002/1230 (81%), Gaps = 48/1230 (4%)
Strand=Plus/Plus
Query 67 CGAATCCAGATCGAATCGAATCACCAACAAGCTC-AAGATCGGTGACGCAGACGACAAAC 125
||||||| ||||| | ||| || || ||||| || ||| |||||||||||| |||
Sbjct 79 CGAATCCGGATCGGGTTTTATCTCCGACGAGCTCGAA-ATCAGTGACGCAGACGGTGAAC 137
Query 126 GGATCGCACCAATTCGTGATCCAAGGATACAGTTTAGCTAAAGGAATCGG-AGTAGGGAA 184
|| ||||| ||||||||||| ||||||||||| ||||| ||||| || || | |||||||
Sbjct 138 GGGTCGCATCAATTCGTGATTCAAGGATACAGCTTAGCGAAAGGGATGGGTA-TAGGGAA 196
Query 185 ACACATAGCAAGTGATAATTTCTCCGTCGGAGGTTATCAATGGACTATCTT-TGTCTACC 243
|||||||| ||||||||||||||||||||||||||||| ||| ||||| | ||||||
Sbjct 197 GCACATAGCGAGTGATAATTTCTCCGTCGGAGGTTATCAGTGGGGGATCTTCT-TCTACC 255
Query 244 CAGATGGTAAAAATCCAGAAGATAACTCTTCTTACGTCTCTGTGTTCATCGTTTTGGCTA 303
| || ||||| ||||| || ||||| || || ||||||||||| || |||| ||||| |
Sbjct 256 CGGACGGTAAGAATCCGGAGGATAATTCGTCGTACGTCTCTGTTTTTATCGCATTGGCCA 315
Query 304 GTGAAGGTACTGAAGTTAGAGCGCTTTTTGAGCTTGCTCTTGTTGATCAAAGTGGTAAA- 362
||||||| || |||||||| |||||||| ||||| ||||||||||| |||||||| |||
Sbjct 316 GTGAAGGAACCGAAGTTAGGGCGCTTTTCGAGCTAGCTCTTGTTGACCAAAGTGG-AAAG 374
Query 363 GGGAAGCATAAGGTTCATAGCCATTTCGATCGGTCGCTTGATGGTGGTCCTTACACGCTT 422
||||| |||||||||||||||||||| || ||||| || |||||||| ||||| || ||
Sbjct 375 GGGAAACATAAGGTTCATAGCCATTTTGAGCGGTCACTCGATGGTGGCCCTTATACACTC 434
Query 423 AAATATAGAGGAAGTATGTGGGGATACAAGCGTTTCTTCAGACGTTCC-TTGCTTGAGAC 481
||||| |||||||| ||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 435 AAATACAGAGGAAGCATGTGGGGATACAAGCGTTTCTTCAGACGTTCCATT-CTTGAGAC 493
Query 482 ATCTGACTACCTTAAAGACGATTGCTTGAAAATCAATTGTACAGTTGGAGTTGTCGTTTC 541
|||||||||||| |||||||||||||||| |||||||||||| ||||||||||| |||||
Sbjct 494 ATCTGACTACCTGAAAGACGATTGCTTGATAATCAATTGTACGGTTGGAGTTGTGGTTTC 553
Query 542 AGAAATACAT-TGCCCAC-GATTACTCTC-GATTCATGTCCCAGACTCAGAACTTGGATC 598
|||||||| | ||||||| | |||| ||| | |||| ||||| || ||||||||||||||
Sbjct 554 AGAAATAC-TCTGCCCACAG-TTACACTCTG-TTCACGTCCCTGATTCAGAACTTGGATC 610
Query 599 ACATTTTGGAAAGTTG--CTGGATA-CTTTAGAAGGTTCAGATGTCACATTTGACATTGC 655
|||||||||| ||| ||||||| | | |||||||| ||| | || ||| |||||||
Sbjct 611 ACATTTTGGA--GTTCTACTGGATAGCATG-GAAGGTTCTGATATAACTTTTAACATTGC 667
Query 656 TGGTGAGAAGTTTCAAGCTCATAAATTGGTTTTGGCTGCACGATCTC-AGTTTTTCA-GA 713
||| |||||||||| |||||||||| | || ||||||| ||||||| | ||||||| |
Sbjct 668 TGGCGAGAAGTTTCTAGCTCATAAACTAGTACTGGCTGCTCGATCTCCA-TTTTTCAAG- 725
Query 714 TCGAAGTTTTACAATGTCCCAGAAGCAAACAACA-ACGAGGT-AGCGATCAGCAATTTGG 771
|| ||||||| || || ||||||||||| | | ||||| | | || | | ||||||
Sbjct 726 TCTAAGTTTTTCAGTGAGTTTGAAGCAAACAATACA-GAGGTTA-CTATTAACGATTTGG 783
Query 772 AACCTAAGGTTTTCAAGGCCTTGTTACACTTCATGTATAAAGATTCTCTCCCAGGA-GAT 830
||||||||||||| ||||| ||| |||| |||||||| ||||||||||| || ||| |||
Sbjct 784 AACCTAAGGTTTTTAAGGCTTTGCTACAATTCATGTACAAAGATTCTCTTCC-GGAAGAT 842
Query 831 GTGGAACCAGTAACGGCTCATTCATTTGACCTATTAAGGCTGTCCGAAATAGATGATACA 890
||||| || | ||| |||||| ||||||| | |||| |||||| |||||| | || |||
Sbjct 843 GTGGAGCCTGCAACAGCTCATACATTTGAGCGCTTAAAGCTGTCAGAAATATACGAAACA 902
Query 891 CTGATTGTAAA-GCTTCTGGCAGCTGCGGA-AATGTACAATCTGAGTAGGCTCAGATTAT 948
|||||||||| | || | ||||| || || || |||| | |||| ||||||||| || |
Sbjct 903 TTGATTGTAAAAGTTT-TAGCAGCAGCCGACAA-GTACGACCTGATTAGGCTCAGGTTGT 960
Query 949 TGTGTGAATCTCACATCTGCAAAGCCGTATCTA-TCAGCTCCGTATCCAAGATCTTAGCT 1007
|||||||||| ||||||||||||| |||||| | ||| ||||| | |||||||||||
Sbjct 961 TGTGTGAATCCCACATCTGCAAAGGCGTATC-AGTCAAATCCGTCGCGAAGATCTTAGCG 1019
Query 1008 TTATCCGACAAATATAATGC-AACTGAACTAAAAAGCGTATCCCTAAAATTCACTGCAGA 1066
|| | |||| ||||||||| || ||||||||| |||| | ||| || || ||||| ||
Sbjct 1020 TTGGCTGACAGATATAATGCTAAG-GAACTAAAAGGCGTTTGCCTTAAGTTTACTGCCGA 1078
Query 1067 AAACCTAGCAGCTGTTCTGCAGACAAAAGCTTATGAAGATCTGAAGGATGACTATCCAAA 1126
|||||||||||||| ||| ||||| | ||||| || | |||||||||| | | |
Sbjct 1079 GAACCTAGCAGCTGTCCTGGAGACAGACGCTTACCAACAGATGAAGGATGAATGTGTGAC 1138
Query 1127 CCTCCAGTCTGAGCTACTAAAGGCGGTGGCTGGTTATGACGAAACAAGTAGCAG--C-GG 1183
||||||||| ||||| || ||||||||||||||| | || ||| |||| ||| | ||
Sbjct 1139 CCTCCAGTCCGAGCTTCTGAAGGCGGTGGCTGGTCACGAGGAAGGTAGTAACAGTACTGG 1198
Query 1184 AGGAGGAAAGTCTCAGAGTGTTTGGGCCCAACTCTCTGACGGTGGTGA-GA--CCAGCAG 1240
||||| |||||||||||| || ||||||||||| |||||||| || | || ||| |||
Sbjct 1199 AGGAGCAAAGTCTCAGAGCGTGTGGGCCCAACTTTCTGACGGCGGGGGCGATACCACCAG 1258
Query 1241 CCGA-AGAGTCAGGCAGCGAACCACTTAGA 1269
|||| | || || || |||||||| ||||
Sbjct 1259 CCGACAT-GTTAGACAACGAACCACCTAGA 1287
> AT3G03740.1 | Symbols: ATBPM4, BPM4 | BTB-POZ and MATH domain
4 | chr3:936878-939808 REVERSE LENGTH=1627
Length=1627
Score = 351 bits (190), Expect = 7e-96
Identities = 479/615 (78%), Gaps = 34/615 (6%)
Strand=Plus/Plus
Query 105 TCGGTGACGCAGACGACAAACGGATCGCACCA-ATTCGTGATCCAAGGATACAGTTTAGC 163
|||||||| ||||| | ||||||||| || || ||| ||| |||| || ||| ||
Sbjct 119 TCGGTGACACAGACCATAAACGGATCACA-CAGCTTCACAATCAAAGGCTATTCTTTGGC 177
Query 164 TAAAGGAATC-GGAGTAGGGAAACACATAGCAAGTGATAATTTCTCCGTCGGAGGTTATC 222
|||||||||| ||| | || |||||||| || || |||| |||| ||||||| |||||||
Sbjct 178 TAAAGGAATCGGGA-TCGGAAAACACATCGCCAGCGATACTTTCACCGTCGGGGGTTATC 236
Query 223 AATGGACTATCT-TTGTCTACCCAGATGGTAAAAATCCAGAAGATAACTCTTCTTACGTC 281
||||| |||||| || |||| || ||||| || ||||| || ||||| || |||| |||
Sbjct 237 AATGGGCTATCTATT-TCTATCCTGATGGCAAGAATCCTGAGGATAATTCGGCTTATGTC 295
Query 282 TCTGTGTTCATCGTTTTGGCTAGTGAAGGTACTGAAGTTAGAGCGCTTTTTGAGCTTGCT 341
|| || ||||| | ||| ||||| || ||||| || ||||| || |||||||||||| ||
Sbjct 296 TCCGTTTTCATTGCTTTAGCTAGCGATGGTACCGATGTTAGGGCTCTTTTTGAGCTTTCT 355
Query 342 CTTG-TTGATCAAAGTGGTAAAGGGAAGCATAAGGTTCATAGCCATTTCGATCG-GTCGC 399
||| ||||||| |||||||||||||||||||||||||||||||| |||||||| | | |
Sbjct 356 -TTGCTTGATCAGAGTGGTAAAGGGAAGCATAAGGTTCATAGCCACTTCGATCGTG-CTC 413
Query 400 TTGATG-GTGGTCCTTACACGCTTAAATATAGAGGAAGTATGTGGGGATACAAGCG-TTT 457
|||| | | |||||||| || || || ||| | || || |||||||| |||||||| |||
Sbjct 414 TTGA-GAGCGGTCCTTATACTCTCAAGTATCGTGGCAGCATGTGGGGCTACAAGCGCTTT 472
Query 458 CTTC-A-GACGTTCCTTGCTTGAGACATCTGACTACCTTAAAGACGATTG-CTTGAAAAT 514
||| | ||| || | ||| || |||||||| | || || || ||||| || ||||||
Sbjct 473 TTTCGAAGAC-TTA-T-GCTGGAAACATCTGATTTTCTGAAGGATGATTGTCT-GAAAAT 528
Query 515 CAATTGTACAGTTGGAGTTGTCGTTTCAGAAATACATTGCCCACGATTAC-TCTCGATTC 573
||||| || || |||||||| || ||||||||| |||||||||| |||| | || ||||
Sbjct 529 TAATTGCACCGTGGGAGTTGTGGTCTCAGAAATAGATTGCCCACGGTTACAT-TCTATTC 587
Query 574 ATGTCCCAG-ACTCAGA-ACTTGGATCACATTTTGGAAAG-TTGCTGGATA-CTTTAGAA 629
||||||| | | || || | ||||||| ||||| || | | || || || | | || |
Sbjct 588 ATGTCCCTGCA-TCTGATA-TTGGATCTCATTTCGGGATGCTT-CTAGAGAACG--AGGA 642
Query 630 -GGTTCAGATGTCACATTTGACAT-TGCTGGTGAGAAGTTTCAAGCTCATAAATTGGTTT 687
||||||||| | || ||| || | | ||||||| ||||| | ||||| | || || |
Sbjct 643 CGGTTCAGATATAACTTTTAACGTCT-CTGGTGAAAAGTTCCGTGCTCACAGGTTAGTAT 701
Query 688 TGGCTGCACGATCTC 702
||||||| |||||||
Sbjct 702 TGGCTGCTCGATCTC 716
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63503689425
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5