BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg937036 Length=663 Score E Sequences producing significant alignments: (Bits) Value AT3G44220.1 | Symbols: | Late embryogenesis abundant (LEA) hyd... 1026 0.0 > AT3G44220.1 | Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr3:15928160-15929758 FORWARD LENGTH=790 Length=790 Score = 1026 bits (555), Expect = 0.0 Identities = 627/663 (95%), Gaps = 0/663 (0%) Strand=Plus/Plus Query 1 CGCTAAAAGCAACCGCGAAAATGACGGAGAAGGAATGTGAGCATCACCACGACGAAGATG 60 ||||||| ||||| || || ||||| |||||||||||||| ||||||||||||||||||| Sbjct 37 CGCTAAACGCAACAGCCAAGATGACTGAGAAGGAATGTGAACATCACCACGACGAAGATG 96 Query 61 AGAAGATGCGGAAACGCATAGGAGCGGTGGTTCTTGGGTTTCTTGCAGTTGTTCTTTTTG 120 |||||||| ||||||| |||||||| |||| ||||||||||| |||| ||||||||| | Sbjct 97 AGAAGATGAGGAAACGTATAGGAGCATTGGTGCTTGGGTTTCTCGCAGCTGTTCTTTTCG 156 Query 121 TGGTTTTCTTGGTGTGGGCGATACTTCACCCACACGGACCGCGTTTTGTTCTTCAAGACG 180 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 157 TGGTTTTCTTGGTGTGGGCGATACTTCACCCACACGGACCACGTTTTGTTCTTCAAGACG 216 Query 181 CAACCATTTACGCATTCAACGTTTCTCAGCCCAATTATCTCACTTCTAATCTTCAGGTCA 240 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 217 CAACCATTTACGCGTTCAACGTTTCTCAGCCTAATTATCTCACTTCTAATCTTCAGGTCA 276 Query 241 CTCTTTCTTCTCGAAATCCTAATGACAAGATCGGAATTTTCTATGACCGCCTTGACATTT 300 |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct 277 CTCTTTCTTCACGAAATCCTAATGACAAGATCGGAATCTTCTATGACCGCCTTGACATCT 336 Query 301 ACGCTTCTTACCGTAACCAACAGGTGACGTTGGCGACTTTATTGCCGGCGACTTACCAAG 360 |||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 337 ACGCATCTTACCGCAACCAACAGGTGACGTTGGCGACGTTATTGCCGGCGACTTACCAAG 396 Query 361 GCCACCTTGATGTGACCGTATGGTCGCCATTTCTGTATGGAACAACCGTACCGGTGGCAC 420 |||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||| Sbjct 397 GCCACCTTGATGTGACAATATGGTCGCCGTTTCTGTATGGAACAACTGTACCGGTGGCAC 456 Query 421 CATATTTTTCTCCGGTGTTAAGCCAAGATCTAACGGCGGGGATGGTGCTTCTGAATATTA 480 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct 457 CATATTTTTCTCCGGCGTTAAGCCAAGATCTAACGGCGGGGATGGTGCTTCTGAATATCA 516 Query 481 AGATCGATGGTTGGGTTAGATGGAAAGTAGGAACGTGGGTCTCCGGTAGGTATCGCCTCC 540 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 517 AGATCGATGGTTGGGTTAGATGGAAAGTGGGAACGTGGGTCTCCGGTAGGTACCGCCTCC 576 Query 541 ACGTCAATTGTCCAGCTTACATTACCTTAGCCGGACATTTTTCCGGTGACGGTCCAGCCG 600 ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 577 ACGTCAATTGTCCAGCTTACATTACCTTAGCCGGACATTTTTCTGGTGATGGTCCAGCCG 636 Query 601 TAAAGTACCAGCTTGTTCAACGATGTGCCGTTGACGTTTAAACAAAGGGATCATCATTAT 660 | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 637 TGAAGTACCAGCTTGTCCAACGATGTGCCGTTGATGTTTAAACAAAGGGATCATCATTAT 696 Query 661 TCT 663 ||| Sbjct 697 TCT 699 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 32049385786 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5