BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg937066 Length=376 Score E Sequences producing significant alignments: (Bits) Value AT3G44428.1 | Symbols: | ECA1 gametogenesis related family pro... 457 4e-128 AT3G45285.1 | Symbols: | ECA1 gametogenesis related family pro... 433 7e-121 > AT3G44428.1 | Symbols: | ECA1 gametogenesis related family protein | chr3:16067393-16067725 REVERSE LENGTH=333 Length=333 Score = 457 bits (247), Expect = 4e-128 Identities = 309/338 (91%), Gaps = 7/338 (2%) Strand=Plus/Plus Query 21 ATGGGTGAGAGGATACAAAGAGTGTGTATGTCTATCTTAACAGTGATGGTTGTGATGCTA 80 |||||||||| ||||||||||||||| |||||||||||||||||||||||| || ||| Sbjct 1 ATGGGTGAGAACATACAAAGAGTGTGTGCGTCTATCTTAACAGTGATGGTTGTAATACTA 60 Query 81 TCACTTTCTGAAGATACGAAAGGTAATAATGATTTTGCTATGGCTCCAATGTCAGAGA-A 139 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| | | Sbjct 61 TCACTTTCT---GATACGAAAGGTAATAATGATTTGGCTATGGCTCCAATGTCAGA-ACA 116 Query 140 AGGGTTGCTGCCAAATCCAATGTCTTGTGTGGCAGACGCAAGAAAAATTCCTGATTGTGT 199 ||||||||| ||||||||| ||||||||||||| ||||||||||||||||| |||||||| Sbjct 117 AGGGTTGCTTCCAAATCCATTGTCTTGTGTGGCTGACGCAAGAAAAATTCCAGATTGTGT 176 Query 200 AGAGTCACTAAAACAAGGCAATT-TGAAAGATATaaaaaaaGAATGTTGCATTATTCTAC 258 |||| || | ||||||||| ||| |||||||||||||| ||||||||||||||||||||| Sbjct 177 AGAGGCAGTGAAACAAGGC-ATTGTGAAAGATATAAAACAAGAATGTTGCATTATTCTAC 235 Query 259 TCGGTCTTCCCGAAGATTGTTTTGGGATTTTATTTCCTATGCGTTTCTACTATCGTGTCG 318 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| | Sbjct 236 TCGGTCTTCCCGAAGTTTGTTTTGGGATTTTATTTCCTATGCGTTTCTACTACCGTATTA 295 Query 319 TACTTAAAATTACATGCAAATTAATAGGCATTTTTTAA 356 ||||||| || ||||||||||||||||||||||||||| Sbjct 296 TACTTAAGATGACATGCAAATTAATAGGCATTTTTTAA 333 > AT3G45285.1 | Symbols: | ECA1 gametogenesis related family protein | chr3:16614566-16614901 FORWARD LENGTH=336 Length=336 Score = 433 bits (234), Expect = 7e-121 Identities = 303/337 (90%), Gaps = 2/337 (1%) Strand=Plus/Plus Query 21 ATGGGTGAGAGGATACAAAGAGTGTGTATGTCTATCTTAACAGTGATGGTTGTGATGCTA 80 ||| |||||| || |||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 1 ATGAGTGAGAATATGCAAAGAGTGTGTGTGTCTATCTTAACAGTGATGGTTTTGATGCTA 60 Query 81 TCACTTTCTGAAGATACGAAAGGTAATAATGATTTTGCTATGGCTCCAATGTCAGAGAAA 140 ||| ||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||| Sbjct 61 TCAATTTCTAAAGTTACGAAAGGTAATAATGATCATGCGCCGGCTCCAATGTCAGAGAAA 120 Query 141 GGGTTGCTGCCAAATCCAATGTCTTGTGTGGCAGACGCAAGAAAAATTCCTGATTGTGTA 200 |||||||||||||||||||| || ||||| || ||||||||||||||||| ||||||||| Sbjct 121 GGGTTGCTGCCAAATCCAATATCATGTGTAGCGGACGCAAGAAAAATTCCAGATTGTGTA 180 Query 201 GAGTCACTAAAACAAGGCAATTTGAAAGAT-ATaaaaaaaGAATGTTGCATTATTCTACT 259 ||| || ||||||| ||| |||||||| || ||||||||||||||||| || |||||||| Sbjct 181 GAGGCAATAAAACAGGGCCATTTGAAA-ATTATAAAAAAAGAATGTTGTATCATTCTACT 239 Query 260 CGGTCTTCCCGAAGATTGTTTTGGGATTTTATTTCCTATGCGTTTCTACTATCGTGTCGT 319 | ||||||||||||||||||||||||||||||||||||| ||||||||||||||| || | Sbjct 240 CAGTCTTCCCGAAGATTGTTTTGGGATTTTATTTCCTATACGTTTCTACTATCGTATCAT 299 Query 320 ACTTAAAATTACATGCAAATTAATAGGCATTTTTTAA 356 |||||| ||||||||||||||||| ||||| |||||| Sbjct 300 ACTTAAGATTACATGCAAATTAATTGGCATCTTTTAA 336 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17694247648 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5