BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg937168 Length=698 Score E Sequences producing significant alignments: (Bits) Value AT3G45110.1 | Symbols: | unknown protein; Has 7 Blast hits to ... 363 2e-99 > AT3G45110.1 | Symbols: | unknown protein; Has 7 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:16508170-16508532 FORWARD LENGTH=363 Length=363 Score = 363 bits (196), Expect = 2e-99 Identities = 307/358 (86%), Gaps = 18/358 (5%) Strand=Plus/Plus Query 313 CATTTTAC-AGACACAAGTGGTGTTGTTTATCATAACAATTACAACGT-TACTATTGATA 370 |||| ||| | ||||||| |||||||||| |||||||||||||||| | ||||||||||| Sbjct 19 CATTGTACTA-ACACAAGCGGTGTTGTTTGTCATAACAATTACAAC-TGTACTATTGATA 76 Query 371 ACTCTATCCATTATGCGGACACAAGTGGTGTTGTCAGCCATCAGCGAGAGAATATTACTG 430 ||||||||||||||||||| ||| |||||||||| |||||||| |||||||||||||||| Sbjct 77 ACTCTATCCATTATGCGGATACACGTGGTGTTGTTAGCCATCACCGAGAGAATATTACTG 136 Query 431 GTCATCATGGACTGGTATTCCCGACGGCTGCAATGACCG-AGTATGGTCCTTCAACTAGT 489 | ||||||||||||||||| ||| ||||| |||||| || | ||||||||| |||||||| Sbjct 137 GCCATCATGGACTGGTATTTCCGGCGGCTACAATGAACGGA-TATGGTCCTGCAACTAGT 195 Query 490 TTTCCGGCGAAGGATATGAGGGAAAATGGGCACTTGATGGTTAATCATAACAGCCGCCCT 549 ||||| | | |||||||||||||||||||||||||||| ||||| || || | | | Sbjct 196 TTTCC----A-G-ATATGAGGGAAAATGGGCACTTGATGGTGAATCAAAATAGAC-C--T 246 Query 550 GTTATGCTACGACCATCAATG-CCTCAACAGCAACCCCAGCCGCAACCACTGTTTGATGA 608 || | |||||||||||||||| || || |||||||| || || |||||||||| |||||| Sbjct 247 GTGACGCTACGACCATCAATGTCC-CAGCAGCAACCACAACCACAACCACTGTCTGATGA 305 Query 609 GTTTAATAAGGTGGAGATGGGGAATTCTAAGCAAGCC-ATGTCTCCTCACAAGACTAA 665 || |||||||||||||| ||||| | || |||||| | ||||| |||| | ||||||| Sbjct 306 GTATAATAAGGTGGAGACGGGGACTGCTGAGCAAGTCTATGTCCCCTCTCGAGACTAA 363 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33807580931 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5