BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg937192 Length=391 Score E Sequences producing significant alignments: (Bits) Value AT3G45248.1 | Symbols: | ECA1 gametogenesis related family pro... 438 2e-122 > AT3G45248.1 | Symbols: | ECA1 gametogenesis related family protein | chr3:16581929-16582273 FORWARD LENGTH=345 Length=345 Score = 438 bits (237), Expect = 2e-122 Identities = 307/341 (90%), Gaps = 3/341 (1%) Strand=Plus/Plus Query 12 ATGCAAAACATGTTGGCTATGAGCATGATAGCTTTGATTATCATCCTATCAATATTTATA 71 |||||||| |||||| || || ||||||| ||||||||||||| || |||||||||||| Sbjct 1 ATGCAAAAAATGTTGAATACGATCATGATACCTTTGATTATCATGCTTTCAATATTTATA 60 Query 72 CAAACAAAAGGAAATGATCTTGCACCGATTCCGTCGTCGATAGCACCAGAACCACAATCA 131 |||||||||||||||||||||||||| ||||| |||||| || |||||||||| |||||| Sbjct 61 CAAACAAAAGGAAATGATCTTGCACCAATTCCATCGTCGGTATCACCAGAACCTCAATCA 120 Query 132 GATAACCAATTCTTTCTTGATCCAATAACTTGTATTCACGATGTGAAAACGATTCCAAAG 191 || ||||||||||||||||| ||| |||||||||||||||||||||||| | |||||||| Sbjct 121 GAGAACCAATTCTTTCTTGACCCACTAACTTGTATTCACGATGTGAAAAAGGTTCCAAAG 180 Query 192 TGTATGGATGCTGTGTTGCACTTTCGATTCAAGCAGGTCACAAAAAAGTGTTGCTATGCC 251 |||||||| || ||||||||||| |||||||| ||||||||||| |||||||| |||| | Sbjct 181 TGTATGGACGCAGTGTTGCACTTCCGATTCAAACAGGTCACAAAGAAGTGTTGTTATGTC 240 Query 252 ATGCTCTCTCTTCCCGAAAGTTG-TTTCGGGGTATTGTTTCCTATTCCTTATGTCTACCA 310 || ||||||||||||||||||| ||| ||| | |||||||||||||||||| ||||||| Sbjct 241 ATATTCTCTCTTCCCGAAAGTTGCTTT-GGGTTTTTGTTTCCTATTCCTTATCTCTACCA 299 Query 311 TCTTCTTCTTAAGGCTGCTTGCAAAATTACTTACTCACCAT 351 || |||||||||||||||||||||| ||||||||||||||| Sbjct 300 TCCTCTTCTTAAGGCTGCTTGCAAA-TTACTTACTCACCAT 339 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18448263883 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5