BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg937247 Length=441 Score E Sequences producing significant alignments: (Bits) Value AT3G45700.1 | Symbols: | Major facilitator superfamily protein... 357 5e-98 AT3G45710.1 | Symbols: | Major facilitator superfamily protein... 124 5e-28 > AT3G45700.1 | Symbols: | Major facilitator superfamily protein | chr3:16778713-16781198 FORWARD LENGTH=1829 Length=1829 Score = 357 bits (193), Expect = 5e-98 Identities = 249/276 (90%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 128 GCCGTCTCATGTCAGTGATATGGCTGTTTCCTGCTCTCGTGA-TAGTTGGGATAGGCGAG 186 ||| ||||||||||||| |||||||| ||||||||||||||| || ||| ||||| ||| Sbjct 1323 GCCATCTCATGTCAGTGCTATGGCTGGTTCCTGCTCTCGTGATTA-ATGGAATAGGTGAG 1381 Query 187 GCCTTTCATTTTCCCA-CGAGTATTGCAATATTCTATGGAGAATTCCCTGAGTCCCTGAG 245 |||||||||||| ||| | | ||||||||||||||||||||||||||||||||| || || Sbjct 1382 GCCTTTCATTTT-CCAGCAAATATTGCAATATTCTATGGAGAATTCCCTGAGTCTCTAAG 1440 Query 246 GAATACTGCGACTTCATTGACCTCGTTGGTGATGGGAATCTCTTTCTATCTGTGCACTGC 305 ||| || |||||||||||||||||| |||||||||||||||||||||||||| |||| || Sbjct 1441 GAACACAGCGACTTCATTGACCTCGGTGGTGATGGGAATCTCTTTCTATCTGAGCACAGC 1500 Query 306 TCTTATTGATCTGATCCAGAGAACCACCAAGTGGTTACCAAATGACATAAACCACGGAAG 365 |||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1501 TCTTATCGATGTGATCCAGAGGACCACCAAGTGGTTACCAAATGACATAAACCACGGAAG 1560 Query 366 AGTTGACAATGTCTACTGGGTTTTAGTCATTTTAGG 401 ||||||||||| |||| ||| ||||||||| |||| Sbjct 1561 GGTTGACAATGTTTACTTGGTATTAGTCATTATAGG 1596 Score = 84.2 bits (45), Expect = 9e-16 Identities = 93/114 (82%), Gaps = 12/114 (11%) Strand=Plus/Plus Query 4 TTCCTCTTATTCTCTGCCATGGCTGATTCAAACTTTAGTGACAAAGAAGCGCATTACTCT 63 |||| ||| ||||||||||||||| ||||| ||| | ||||||||||||||| | || Sbjct 35 TTCCACTTGTTCTCTGCCATGGCTAATTCAGACTCTGGTGACAAAGAAGCGC---A-TC- 89 Query 64 AGCGATCCAAGTAGAAAGCGTGGTGGCTGGATCACTTTACCGTTCATGCTTGTT 117 || | | ||| |||| |||||||||||||||||||||||||||||| ||| Sbjct 90 -GC--T-C---TAGCAAGCATGGTGGCTGGATCACTTTACCGTTCATGCTCGTT 136 > AT3G45710.1 | Symbols: | Major facilitator superfamily protein | chr3:16782643-16784735 FORWARD LENGTH=1877 Length=1877 Score = 124 bits (67), Expect = 5e-28 Identities = 102/118 (86%), Gaps = 5/118 (4%) Strand=Plus/Plus Query 4 TTCCTCTTATTCTCTGCCATGGCTGATTCAAACTTTAGTGACA---AAGAAGCGCATTAC 60 ||| |||| |||||| |||||||||||||||| | | |||||| ||| ||||||| | Sbjct 59 TTCATCTTGTTCTCTACCATGGCTGATTCAAAATCTGGTGACACGGAAGTAGCGCATCGC 118 Query 61 TCTAGCGATCCAAGTAG-AAAGCGTGGTGGCTGGATCACTTTACCGTTCATGCTTGTT 117 |||||||||||||| | |||||||||||||||||||||||||||||||||||| ||| Sbjct 119 TCTAGCGATCCAAG-CGAAAAGCGTGGTGGCTGGATCACTTTACCGTTCATGCTAGTT 175 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20961651333 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5