BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg937250
Length=1134
Score E
Sequences producing significant alignments: (Bits) Value
AT3G45720.1 | Symbols: | Major facilitator superfamily protein... 1134 0.0
AT3G45680.1 | Symbols: | Major facilitator superfamily protein... 593 9e-169
AT3G45690.1 | Symbols: | Major facilitator superfamily protein... 547 7e-155
AT3G45700.1 | Symbols: | Major facilitator superfamily protein... 483 2e-135
> AT3G45720.1 | Symbols: | Major facilitator superfamily protein
| chr3:16785046-16786945 FORWARD LENGTH=1668
Length=1668
Score = 1134 bits (614), Expect = 0.0
Identities = 789/872 (90%), Gaps = 18/872 (2%)
Strand=Plus/Plus
Query 34 TCAATCCTATGCCAATCCCCATCAAAACTCCACCTCCGGATCTTGTATGCAGCCTTAGCT 93
||||||||||||||||| |||||||||||||||||| || ||||||||||||| ||||||
Sbjct 376 TCAATCCTATGCCAATCGCCATCAAAACTCCACCTCGGGGTCTTGTATGCAGCGTTAGCT 435
Query 94 CTAGTGACCGCTGGAACTGCTGGGATAAGGGTGGCTTTGGCATCTGCGGGTGCAAACCAA 153
|||||||| ||||||||| |||||| | ||||||||||||||||||| |||||||||||
Sbjct 436 CTAGTGACTGCTGGAACTTCTGGGACACGGGTGGCTTTGGCATCTGCTGGTGCAAACCAG 495
Query 154 TATGATAAACCTAGACACAAAGGAACCTTCTTCAACTGGTACTTCTTTACGGTAAATACA 213
||||||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||||
Sbjct 496 TATGATAAACCTAGAGACAAAGGAAGCTTCTTCAACTGGTACTTCCTCACGGTAAATACA 555
Query 214 GGCGCAATTATTAGCGCGACATCAATTGTGTATACGCAGGAGAACGCTAGCTGGAAG-CT 272
||||| ||||||||||||||| ||||||| ||||| |||||||| ||||||||| || ||
Sbjct 556 GGCGCGATTATTAGCGCGACAGCAATTGTATATACACAGGAGAATGCTAGCTGG-AGACT 614
Query 273 CGGGTTCGGTCTTTGTGCAGCTGCTAATTTGATCAGTTTCATAGTTTTTATCTCCGGGAA 332
|||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 615 CGGGTTTGGTCTTTGTGCAGCTGCTAATTTGATCAGTTTCATAGTTTTCATTTCCGGGAA 674
Query 333 GAGATTCTACAAGCATGACAAACCAATGGGAAGTCCCTTCACAAGCCTGATCCGCGTTTT 392
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 675 GAGATTCTACAAGCATGACAAACCAATGGGAAGTCCCTTCACAAGCCTTATCCGCGTCTT 734
Query 393 AGTCGCTGCTATACTGAAAATAAAAGCT-GTTATATCTTCTAAAGAAGAAGATTATCACC 451
||||||||||||||||||||| || | | || | ||||| |||||||||||||||||||
Sbjct 735 AGTCGCTGCTATACTGAAAATCAAGG-TAGTGACCTCTTCCAAAGAAGAAGATTATCACC 793
Query 452 GGGA-GCTAGAAAAAGA-TGGCAAGACTTCCGTTGGAATGCCTTCCAAGAGCTTCAGGTT 509
|||| | | |||||||| | |||||||| ||||||||||||||||||||||||||||
Sbjct 794 GGGAAGTT-GAAAAAGAATC-CAAGACTTGTATTGGAATGCCTTCCAAGAGCTTCAGGTT 851
Query 510 CTTGAACCGTGCAGCATTGAAGA-CTGATGAGGACTTAAATGA-GAAAGACGGCTCA-GT 566
||||||||||||||||| |||| | || ||||||||||| | ||| || |||| | ||
Sbjct 852 TTTGAACCGTGCAGCATTAAAGAGC-GAAAAGGACTTAAATCAAGAA-GATGGCTTATGT 909
Query 567 TAATAACATCT-GGAGGCTATGTTCTGTTGAGGAAGTAGAAGATTTGAAATCTGTTCTCA 625
| |||| || ||||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 910 CA-TAACC-CTTGGAGGTTATGTTCTGTTGAGGAAGTAGAAGATTTTAAATCTGTTCTCA 967
Query 626 GAGTTCTCCCTCTATGGTTAGCAATTCT-ATTCGTTGGAAATTCCATTGGTTTTCAAGCA 684
||||||| ||||||||||||||||| || ||||||||||| |||||||||| | ||||||
Sbjct 968 GAGTTCTTCCTCTATGGTTAGCAAT-CTTATTCGTTGGAACTTCCATTGGTGTCCAAGCA 1026
Query 685 AGCATGACGGTTCTACAAGCTCTGGTAACAGACCGAGGACTCGGCTCTAGATTCAAAGTT 744
|||||||||||||| |||||||||||||||||||||||||||| ||||| ||| |||||
Sbjct 1027 AGCATGACGGTTCTCCAAGCTCTGGTAACAGACCGAGGACTCGACTCTAAATTTAAAGTC 1086
Query 745 CCGGCCGGGTCACTGCAAGTAATAGTACTCATCTCATCATGCGTCTTTCTTGTGCTCAAT 804
||||||||||| || |||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1087 CCGGCCGGGTCTCTACAAGTAATAGTACTCATCTCTTCATGCGTCTTTCTCGTGCTCAAT 1146
Query 805 AACTGGACTATGTATCCCATGTATCAGAAGATAACCCATAAACAGCTAACACCGCTTCAA 864
||||||||||| |||||||| |||||||||||||| ||||||||||| ||||| || |||
Sbjct 1147 AACTGGACTATTTATCCCATCTATCAGAAGATAACTCATAAACAGCTGACACCACTGCAA 1206
Query 865 CAAGTCGGTATAGGCCAAGTTTTCAACATCCT 896
||||||||||||||||||||||||||||||||
Sbjct 1207 CAAGTCGGTATAGGCCAAGTTTTCAACATCCT 1238
Score = 320 bits (173), Expect = 2e-86
Identities = 211/229 (92%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 904 TGGCTCTTTCCTCCTCTCGTGATAGTTGGAATTGGCGATGCCTTCCATTATATGGCGAAT 963
||||| || || ||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 1315 TGGCTGTTACCACCTCTTGTGATAGTTGGAATTGGCGATGCCTTTCATTATATGGCGAAT 1374
Query 964 GTAGCAGTGTTCTATGGAGAGTTCCCTGAGTCTCAA-AGGAACACAGCAACCTGTGTGAC 1022
|| |||||||||||||||||||||||||||||| | |||||||||||||||| ||||||
Sbjct 1375 GTTGCAGTGTTCTATGGAGAGTTCCCTGAGTCT-ATGAGGAACACAGCAACCTCTGTGAC 1433
Query 1023 CTCGGTGGCGATTGGAATCTCCTTCTATTTAAGTATAGCTCTAATCAACCTGATACAGAG 1082
|||||||||| |||||||||||||||||||||||| ||||||||| ||| ||||||||||
Sbjct 1434 CTCGGTGGCGTTTGGAATCTCCTTCTATTTAAGTACAGCTCTAATAAACTTGATACAGAG 1493
Query 1083 GGACCACCACGTTGTTACCAGACGACATTAACCATGGGAGAGTGGACAA 1131
| |||||| ||| ||||||||||||||||||||| ||||||||||||||
Sbjct 1494 G-ACCACCGCGTGGTTACCAGACGACATTAACCACGGGAGAGTGGACAA 1541
Score = 56.5 bits (30), Expect = 5e-07
Identities = 30/30 (100%), Gaps = 0/30 (0%)
Strand=Plus/Plus
Query 3 TTAGGTATTTCAGTGACTTCTTATGGATGG 32
||||||||||||||||||||||||||||||
Sbjct 100 TTAGGTATTTCAGTGACTTCTTATGGATGG 129
> AT3G45680.1 | Symbols: | Major facilitator superfamily protein
| chr3:16770933-16773030 FORWARD LENGTH=1861
Length=1861
Score = 593 bits (321), Expect = 9e-169
Identities = 702/882 (80%), Gaps = 41/882 (5%)
Strand=Plus/Plus
Query 34 TCAATCCTATGCCA-ATCC-CCATCAAAACTCCACCTCCGGATCTTGTATGCAGCCTTAG 91
||| ||||||| || | || || ||||||||||||||| |||||||||| |||||||||
Sbjct 441 TCAGTCCTATG-CACA-CCGCCGTCAAAACTCCACCTCGGGATCTTGTACACAGCCTTAG 498
Query 92 CTCTAGTGACCGCTGGAACTGCTGGGATAAGGGTGGCTTTGGCATCTGCGGGTGCAAACC 151
|| |||||||| ||||| | | ||||| | || | | ||||||| |||||||||||||
Sbjct 499 CTTTAGTGACCACTGGAGCAGGTGGGACACGGTTCACCATGGCATCCGCGGGTGCAAACC 558
Query 152 AATATGATAAACCT--AGACACAAAGGAACCTTCTTCAACTGGTACTTCTTTACGGTAAA 209
||||||| |||||| ||| || |||||| ||||||||||||||||||| | || || |
Sbjct 559 AATATGAGAAACCTAAAGA-AC-AAGGAAGCTTCTTCAACTGGTACTTCCTCACACTATA 616
Query 210 TACAGGCGCAATTATTAGCGCGACATCAATTGTGTATACGCAGGAGAACGCTAGCTGGAA 269
| || || |||| | | || ||| ||||||| |||| || || || |||||||||||
Sbjct 617 CGCTGGAGCTATTACTGGTGCAACAGCAATTGTATATATACAAGACAATGCTAGCTGGAA 676
Query 270 GCTCGGGTTCGGTCTTTGTGCAGCTGCTAATTTGATCAGTTTCATAGTTTTTATCTCCGG 329
|| ||||| ||||| || || |||||||||||||||||||||||||||||| |||| ||
Sbjct 677 ACTAGGGTTTGGTCTCTGCGCGGCTGCTAATTTGATCAGTTTCATAGTTTTTGTCTCTGG 736
Query 330 GAAGAGATTCTACAAGCATGACAAACCAATGGGAAGTCCCTTCACAAGCCTGATCCGCGT 389
|||||||| |||||||||||||||||||||||||||||||||||| || || ||||||||
Sbjct 737 GAAGAGATACTACAAGCATGACAAACCAATGGGAAGTCCCTTCACGAGTCTAATCCGCGT 796
Query 390 TTTAGTCGCTGCTATACTGAAAATAAAAGCTGTTATATCTT-CTAAAGAAGAAGATTATC 448
| ||||| |||||| | | |||| || ||||| ||||| | | || |||||||| ||||
Sbjct 797 TGTAGTCTCTGCTACAGTAAAAAGGAAGGCTGTAATATCATGC-AACGAAGAAGACTATC 855
Query 449 A-C-CG--GGAGCTAGAAAAAGATGG-CAAGACTTCCGTTGGAATGCCTTCCAAGAGCTT 503
| | | || || ||||| || || ||||||||| | || |||||| |||||||||||
Sbjct 856 ATCACTATGGT-CTCGAAAAGGA-GGTCAAGACTTCTGCTGCAATGCCATCCAAGAGCTT 913
Query 504 CAGGTTCTTGAACCGTGCAGCATTGAAGACTGATGAGGACTTAAATGAGAAAGACGGCTC 563
||||||||||||||| || || |||| ||| | || || |||||| ||||||| || ||
Sbjct 914 CAGGTTCTTGAACCGCGCCGCTTTGATGACCAAAGATGATTTAAATCAGAAAGAAGGATC 973
Query 564 AGTTAATAACATCTGGAGGCTATGTTCTGTTGAGGAAGTAGAAGATTTGAAATCTGTTCT 623
|||||| ||||||||||||||||| ||||| | |||||||||||||| ||| | ||||
Sbjct 974 AGTTAACAACATCTGGAGGCTATGCTCTGTACAAGAAGTAGAAGATTTCAAAGCCATTCT 1033
Query 624 CAGAGTTCTCCCTCTATGGTTAGCAATTC-TATTCGTTG-GAAATTCC-ATTGGTTTT-C 679
| ||||| | |||||||||||| |||| | | ||||| | | | | || || ||| | |
Sbjct 1034 CCGAGTTTTTCCTCTATGGTTATCAAT-CATCTTCGT-GAGTACT-CCTAT-GGTGATGC 1089
Query 680 AAGCAAGCATGACGGTTCTACAAGCTCTGGTAACAGACCGAGGACTCGGCTC-TAGATT- 737
|| ||||| ||| || || |||||||| || || ||||| ||||| || || || |||
Sbjct 1090 AAACAAGCTTGATTGTACTCCAAGCTCTAGTCACGGACCGCGGACTTGG-TCCTA-ATTT 1147
Query 738 CAAAGTTCCGGCCGGGTCACTGCAAGTAATAGTACTCATCTCAT-CATGCGTCT-TTCTT 795
|||||| |||||||| || || ||||||||| || ||||| | | ||||| | | || |
Sbjct 1148 CAAAGTCCCGGCCGGTTCCCTCCAAGTAATAATAATCATCAC-TGCATGCAT-TGTTATC 1205
Query 796 GTGC-TCAATAACTGGACTATGTATC-CCA-TGTATCA-GAAGATAACCCATAAACAGCT 851
| | | || |||||| || ||| | ||| |||| || |||| |||| ||||| |||
Sbjct 1206 AT-CATGAACAACTGG-CT-TGTCTTTCCAATGTA-CAAGAAGCTAACTCATAAGTTGCT 1261
Query 852 AACACCGCTTCAACAAGTCGGTATAGGCCAAGTTTTCAACAT 893
|||||||||||| |||||||||||||||| ||| ||| |||
Sbjct 1262 GACACCGCTTCAAAAAGTCGGTATAGGCCAGGTTCTCACCAT 1303
> AT3G45690.1 | Symbols: | Major facilitator superfamily protein
| chr3:16776268-16778150 FORWARD LENGTH=1551
Length=1551
Score = 547 bits (296), Expect = 7e-155
Identities = 696/881 (79%), Gaps = 60/881 (7%)
Strand=Plus/Plus
Query 34 TCAATCCTATGCCAATCCCCATCAAAACTCCACCTCCGGATCTTGTATGCAGCCTTAGCT 93
||||| |||||| |||| |||||||||||||| ||| ||||||||||| ||||||||||
Sbjct 373 TCAATTCTATGCGAATCGCCATCAAAACTCCAGCTCGGGATCTTGTATATAGCCTTAGCT 432
Query 94 CTAGTGACCGCTGGAACTGCTGGGATAAG-GG-TGGCTTTGGCATCTGCGGGTGCAAACC 151
||||||| | |||| | ||| || || | || | | || ||||| |||||||||||||
Sbjct 433 CTAGTGATCATTGGATCAGCT-GG-TACGCGGTTTACCTTAGCATCCGCGGGTGCAAACC 490
Query 152 AATATGATAAACCT--AGACACAAAGGAACCTTCTTCAACTGGTACTTCTTTACGGTAAA 209
||||||| |||||| ||| || |||||| ||| ||||||||||||||| | || | |
Sbjct 491 AATATGAGAAACCTAAAGA-AC-AAGGAAGCTTTTTCAACTGGTACTTCCTCACACTCTA 548
Query 210 TACAGGCGCAATTATTAGCGCGACATCAATTGTGTATACGCAGGAGAACGCTAGCTGGAA 269
|| || || |||| | | || ||| ||||||| ||||| ||||| || |||||||||||
Sbjct 549 CACTGGAGCTATTACTGGTGCAACAGCAATTGTATATACACAGGAAAATGCTAGCTGGAA 608
Query 270 GCTCGGGTTCGGTCTTTGTGCAGCT-GCTAATTTGATCAGTTTCATAGTTTTTATCTCCG 328
|| |||||||||||||| || | | |||||||||||||||||||||||||| |||| |
Sbjct 609 ACTTGGGTTCGGTCTTTGCGCCG-TCGCTAATTTGATCAGTTTCATAGTTTTCGTCTCTG 667
Query 329 GGAAGAGATTCTACAAGCATGACAAACCAATGGGAAGTCCCTTCACAAGCCTGATCCGCG 388
| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 668 GCAAGAGATACTACAAGCATGACAAACCAATGGGAAGTCCCTTCACAAATCTGATCCGCG 727
Query 389 TTTTAGTCGCTGCTATACTGAAAATA--AAAGCTGTTATATCTTCTAAAGAAGAAGATTA 446
|| |||||||||||| | ||||| | |||||||| || || |||| ||||||||| ||
Sbjct 728 TTGTAGTCGCTGCTACAA-GAAAA-AGGAAAGCTGTGATTTCATCTAGAGAAGAAGACTA 785
Query 447 TCACCG-GGAGCTAGAAAAAGATGGCAAGACTTCCGT-TGGAATGCCTTCCAAGAGCTTC 504
||||| || ||| | || ||| |||||||| || | || |||||| |||||||||||
Sbjct 786 TCACCATGG-GCTTGGAAGAGAAGGCAAGACATCT-TCTGCAATGCCCTCCAAGAGCTTT 843
Query 505 AGGTTCTTGAACCGTGCAGCATTGAAGACTGATGAGGACTTAAATGAGAAAGACGGCTCA 564
|||||||| ||||||||||||||||| || || || | | || | |||
Sbjct 844 AGGTTCTTTAACCGTGCAGCATTGAAAACCGA--AG-A-T-----GA------C---TCA 885
Query 565 GTTAATAACATCTGGAGGCTATGTTCTGTTGAGGAAGTAGAAGATTTGAAATCTGTTCTC 624
|||||||||| ||||||||||||||||||| | |||||||||||||| ||| | ||| ||
Sbjct 886 GTTAATAACAACTGGAGGCTATGTTCTGTTCAAGAAGTAGAAGATTTTAAAGCCGTTTTC 945
Query 625 AGAGTTCTCCCTCTATGGTTAGCAATTC-TATTCGTTGGAAATTCCATTGGTTTT-CAAG 682
||||||||||||| | |||| || | | |||||| | | | |||| ||| |||
Sbjct 946 CGAGTTCTCCCTCTGTTACTAGCCAT-CATCTTCGTTAGTACTCCCAT-GGTGACGCAAA 1003
Query 683 CAAGCATGACGGT-TCTACAAGCTCTGGTAACAGACCGAGGACTCGG-C-TCTAGATTCA 739
||||| ||| | | |||||||||| || |||||||| || ||||| | || | ||||
Sbjct 1004 CAAGCTTGATTATAT-TACAAGCTCTAGTCACAGACCGCGGTCTCGGGCCTC-AC-TTCA 1060
Query 740 AAGTTCCGGCCGGGTCACTGCAAGTAATAGTACTCATCTCAT-CATGCGTCTTTCTTGTG 798
|| | ||||||||||| || ||||| |||||| ||||| | | |||| | || || |
Sbjct 1061 AAATCCCGGCCGGGTCCCTCCAAGTCATAGTAATCATCAC-TGCATG--TATTG-TTAT- 1115
Query 799 CTCAAT-AAC--TGGACTATGT--ATCCCATGTATCAGAAGATAACCCATAAAC-AGCTA 852
|| ||| ||| | | || ||| |||||||||| |||||| || ||||||| | | |
Sbjct 1116 CTTAATGAACAATTGCCT-TGTCTATCCCATGTACCAGAAGCTAGCCCATAAGCCAT-TG 1173
Query 853 ACACCGCTTCAACAAGTCGGTATAGGCCAAGTTTTCAACAT 893
|||||||||||| |||||||||||||||| ||||||| |||
Sbjct 1174 ACACCGCTTCAAAAAGTCGGTATAGGCCACGTTTTCATCAT 1214
> AT3G45700.1 | Symbols: | Major facilitator superfamily protein
| chr3:16778713-16781198 FORWARD LENGTH=1829
Length=1829
Score = 483 bits (261), Expect = 2e-135
Identities = 681/876 (78%), Gaps = 59/876 (7%)
Strand=Plus/Plus
Query 34 TCAATCCTATGCCAATCCCCATCAAAACTCCACCTCCGGATCTTGTATGCAGCCTTAGCT 93
||||| |||||||||| ||||||||||| || || |||||||||||||||||||||||
Sbjct 419 TCAATTTTATGCCAATCACCATCAAAACTACAACTTGGGATCTTGTATGCAGCCTTAGCT 478
Query 94 CTAGTGACCGCTGGAACTGCTGGGATAAG-GGTGGC-T-TTGGCATCTGCGGGTGCAAAC 150
||||||| | ||||||| |||||| | | ||| | | |||||||| || |||||||||
Sbjct 479 CTAGTGATCACTGGAACAGCTGGG--ACGCGGT-TCATCTTGGCATCCGCAGGTGCAAAC 535
Query 151 CAATATGATAAACCT--AGACACAAAGGAACCTTCTTCAACTGGTACTTCTTT-ACGGTA 207
|||||| | |||||| ||| || |||||| ||||||||||||||||| ||| || ||
Sbjct 536 CAATATAAGAAACCTAAAGA-AC-AAGGAAGGTTCTTCAACTGGTACTT-TTTCACACTA 592
Query 208 AATACAGGCGCAATTATTAGCGCGACATCAATTGTGTATACGCAGGAGAACGCTAGCTGG 267
|| || || |||| | || ||||| ||||||| ||| | ||||| || |||||||||
Sbjct 593 TATGGTGGAGCGATTACTGGCACGACAGCAATTGTATATGCACAGGACAATGCTAGCTGG 652
Query 268 AAGCTCGGGTTCGGTCTTTGTG-CAGCTGCTAATTTGATCAGTTTCAT-AGTTTTTATCT 325
||||| || |||||||| || | | |||||||| |||||||||||||| | |||| ||
Sbjct 653 AAGCTTGGATTCGGTCTCTGCGTC-GCTGCTAACTTGATCAGTTTCATCA-TTTTCGTCG 710
Query 326 CCGGGAAGAGATTCTACAAGCATGACAAACCAATGGGAAGTCCCTT-CACAAGCCTGA-T 383
| ||||||||| ||||| |||||||| |||| |||||||| |||| ||||| || | |
Sbjct 711 CTGGGAAGAGACTCTACGAGCATGACCAACCTTTGGGAAGT-CCTTATACAAGTCT-AGT 768
Query 384 CCGCGTTTTAGTCGCTGCTATACTGAAAATAAAAGCTGTTATATC-TTCTAAAGAAGAAG 442
||||||||||||||||||| | ||||| ||| ||||| || || | | ||||| ||||
Sbjct 769 TCGCGTTTTAGTCGCTGCTACAATGAAACGAAAGGCTGTGATTTCATAC-AAAGACGAAG 827
Query 443 A-T-T-ATCACCGGGAGCTAGAAAAAGATG-GCAAGACTTCCGTTGGAATGCCTTCCAAG 498
| | | ||||||| ||||| |||||||| | |||||||| |||| |||||| ||||||
Sbjct 828 ACTATCATCACCGCGAGCTCGAAAAAGA-GACCAAGACTTATGTTGCAATGCCCTCCAAG 886
Query 499 AGCTTCAGGTTCTTGAACCGTGCAGCATTGAAGACTGATGAGGACTTAAATGAGAAAGAC 558
||||||||||||||||||||||||||||||||||| | || | | || |||
Sbjct 887 AGCTTCAGGTTCTTGAACCGTGCAGCATTGAAGAC--A-GA--A-------G-GA--GAC 931
Query 559 GGCTCAGTTAATAACATCTGGAGGCTATGTTCTGTTGAGGAAGTAGAAGATTTGAAATCT 618
||| ||||||||| ||||||||||| |||||| |||||||||||||||| ||| |
Sbjct 932 ---TCAAATAATAACATGTGGAGGCTATGCTCTGTTCAGGAAGTAGAAGATTTCAAAGCC 988
Query 619 GTTCTCAGAGTTCTCCCTCTATGGTTAGCAATTC-TATTCGTTGGAAATTCCATTG-GTT 676
|||||| || || ||||||| ||| | | | | | ||| | | | || | | | |
Sbjct 989 GTTCTCCGACTTGTCCCTCTCTGGACATCTGT-CATGTTCCTCAGCGCTCCCCTAGCGGT 1047
Query 677 TTCAAGCAAGCATGACGGTTCTACAAGCTCTGGTAACAGACCG-AGGACTCGGCTCTAGA 735
||| |||||||| || || |||||| |||| | ||||| | ||| ||| | | |
Sbjct 1048 G-CAAATGAGCATGACTGTCCTCCAAGCTATGGTCATGGACCGTAA-ACTTGGCCC-ACA 1104
Query 736 -TTCAAAGT-TCCGGCCGGGTC-ACTGCAAGTAATAGTACTCATCTCATC-ATGCGTCTT 791
|||||||| || | | ||||| | ||||||| |||| |||| |||| | |||||||||
Sbjct 1105 CTTCAAAGTCTCTG-CTGGGTCTA-TGCAAGTCATAGCACTCGTCTC-TGGATGCGTCTT 1161
Query 792 TCTTGTGCTCAATAACTGGACTATGTATCCCATGTATCAGAAGATAACCCATAAACAGCT 851
| | | || || |||||||||| |||||||||||||||||| ||| || |||| |||
Sbjct 1162 TATCATACTTAACAACTGGACTACCTATCCCATGTATCAGAAGCTAATCCGCAAACCGCT 1221
Query 852 AACACCGCTTCAACAAGTCGGTATAGGCCAAGTTTT 887
|||||||| ||| ||||||| || ||||| |||||
Sbjct 1222 GACACCGCTACAAAAAGTCGGGATCGGCCACGTTTT 1257
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55622203860
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5