BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg937273

Length=215
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G45850.1 | Symbols:  | P-loop containing nucleoside triphosp...   270    3e-72
  AT3G45851.1 | Symbols:  | unknown protein; Has 30201 Blast hits...   183    4e-46


> AT3G45850.1 | Symbols:  | P-loop containing nucleoside triphosphate 
hydrolases superfamily protein | chr3:16855612-16861527 
REVERSE LENGTH=3675
Length=3675

 Score =  270 bits (146),  Expect = 3e-72
 Identities = 152/155 (98%), Gaps = 0/155 (0%)
 Strand=Plus/Minus

Query  32   GGAAGCAAAACCCACTCTGGAGATTTGTAGACTTACAGAGAAGGATCAAGTTTCAGCAAT  91
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct  155  GGAAGCAAAACCCACTCTGGAGATTTGAAGACTTACAGAGAAGGATCAAGTTTCAGCAAT  96

Query  92   GGTGGATTCGAAagagagagacttggagagagagagagagagTGTGACTTCAAGTGCATT  151
            |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct  95   GGTGGATTCGAAAGAGAGCGACTTGGAGAGAGAGAGAGAGAGTGTGACTTCAACTGCATT  36

Query  152  TATTGTTCCTTCTTCTCAAAGCAGAAGAAGAGATG  186
            |||||||||||||||||||||||||||||||||||
Sbjct  35   TATTGTTCCTTCTTCTCAAAGCAGAAGAAGAGATG  1


> AT3G45851.1 | Symbols:  | unknown protein; Has 30201 Blast hits 
to 17322 proteins in 780 species: Archae - 12; Bacteria - 
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses 
- 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:16861431-16861535 
FORWARD LENGTH=105
Length=105

 Score =  183 bits (99),  Expect = 4e-46
 Identities = 103/105 (98%), Gaps = 0/105 (0%)
 Strand=Plus/Plus

Query  90   ATGGTGGATTCGAAagagagagacttggagagagagagagagagTGTGACTTCAAGTGCA  149
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct  1    ATGGTGGATTCGAAAGAGAGCGACTTGGAGAGAGAGAGAGAGAGTGTGACTTCAACTGCA  60

Query  150  TTTATTGTTCCTTCTTCTCAAAGCAGAAGAAGAGATGAGAGATGA  194
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  61   TTTATTGTTCCTTCTTCTCAAAGCAGAAGAAGAGATGAGAGATGA  105



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 9601140059


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5