BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg937273 Length=215 Score E Sequences producing significant alignments: (Bits) Value AT3G45850.1 | Symbols: | P-loop containing nucleoside triphosp... 270 3e-72 AT3G45851.1 | Symbols: | unknown protein; Has 30201 Blast hits... 183 4e-46 > AT3G45850.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:16855612-16861527 REVERSE LENGTH=3675 Length=3675 Score = 270 bits (146), Expect = 3e-72 Identities = 152/155 (98%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 32 GGAAGCAAAACCCACTCTGGAGATTTGTAGACTTACAGAGAAGGATCAAGTTTCAGCAAT 91 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 155 GGAAGCAAAACCCACTCTGGAGATTTGAAGACTTACAGAGAAGGATCAAGTTTCAGCAAT 96 Query 92 GGTGGATTCGAAagagagagacttggagagagagagagagagTGTGACTTCAAGTGCATT 151 |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 95 GGTGGATTCGAAAGAGAGCGACTTGGAGAGAGAGAGAGAGAGTGTGACTTCAACTGCATT 36 Query 152 TATTGTTCCTTCTTCTCAAAGCAGAAGAAGAGATG 186 ||||||||||||||||||||||||||||||||||| Sbjct 35 TATTGTTCCTTCTTCTCAAAGCAGAAGAAGAGATG 1 > AT3G45851.1 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:16861431-16861535 FORWARD LENGTH=105 Length=105 Score = 183 bits (99), Expect = 4e-46 Identities = 103/105 (98%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 90 ATGGTGGATTCGAAagagagagacttggagagagagagagagagTGTGACTTCAAGTGCA 149 |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct 1 ATGGTGGATTCGAAAGAGAGCGACTTGGAGAGAGAGAGAGAGAGTGTGACTTCAACTGCA 60 Query 150 TTTATTGTTCCTTCTTCTCAAAGCAGAAGAAGAGATGAGAGATGA 194 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TTTATTGTTCCTTCTTCTCAAAGCAGAAGAAGAGATGAGAGATGA 105 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 9601140059 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5