BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg937338
Length=2530
Score E
Sequences producing significant alignments: (Bits) Value
AT3G46290.1 | Symbols: HERK1 | hercules receptor kinase 1 | chr... 3864 0.0
AT5G59700.1 | Symbols: | Protein kinase superfamily protein | ... 1687 0.0
AT5G61350.1 | Symbols: | Protein kinase superfamily protein | ... 185 1e-45
> AT3G46290.1 | Symbols: HERK1 | hercules receptor kinase 1 | chr3:17012728-17015885
FORWARD LENGTH=3032
Length=3032
Score = 3864 bits (2092), Expect = 0.0
Identities = 2396/2542 (94%), Gaps = 23/2542 (1%)
Strand=Plus/Plus
Query 1 TTATTCTCTATTGGGTCAAAATGGGTATTGAAAAGTTTGGAAA-TTTCATC-----TT-- 52
|||||||||||||||||||||||||||||||||||||| |||| ||||||| ||
Sbjct 136 TTATTCTCTATTGGGTCAAAATGGGTATTGAAAAGTTT-GAAACTTTCATCTTGATTTCA 194
Query 53 --GATTTCGATCTTGATTTGCATCTGCCATGGATTCACACCTCAAGATAATTACTTAATC 110
||||||||||||| |||| ||||||||||||||||||||| ||||||||||| |||
Sbjct 195 ACGATTTCGATCTTGCTTTGTATCTGCCATGGATTCACACCTGTGGATAATTACTTGATC 254
Query 111 AACTGTGGATCACCAAGCAATGGAACACTAATGGGTCGAATCTTTATGTCTGATAAGCTC 170
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 255 AACTGTGGATCACCAACCAATGGAACACTAATGGGTCGAATCTTTCTGTCTGATAAGCTC 314
Query 171 TCTTCGAACTTACTTACTTC-TCCCAAAGAGATTCTCGCAAGCGAAAGCGTTAATAACGC 229
|||||||| ||||||||||| | ||||||||||||||||||||| | ||| |||| |
Sbjct 315 TCTTCGAAGTTACTTACTTCGT-CCAAAGAGATTCTCGCAAGCGTAGGCG---GTAACTC 370
Query 230 TGGCTCAGACATTTACCAAACGGCGAGAGTCTTCACCGAAGTCTCTAGCTACAAATTCTC 289
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 371 TGGCTCAGACATTTACCACACGGCAAGAGTCTTCACCGAAGTCTCTAGCTACAAATTCTC 430
Query 290 TATCACTCGTGGTCGTCATTGGGTTCGTCTCTATTTCAATCCTTTTGACTACCAAAACTT 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 431 GGTCACTCGTGGTCGTCATTGGGTTCGTCTCTATTTCAATCCTTTTGACTACCAAAACTT 490
Query 350 CAAAATGGGTTCAGCTAAATTCGCAGTTTCGTCACAAAGTCATGTCCTTTTGAGTGATTT 409
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 491 CAAAATGGGTTCAGCTAAATTCGCGGTTTCTTCACAAAGTCATGTCCTTTTGAGTGATTT 550
Query 410 CAATGTTAAGAGTACGAGAGTTGTTAAAGAGTACTCTTTGAATGTGACTACCAATGATTT 469
|| ||||| |||| | | |||||| ||||||||||||||||| |||||||| ||||||||
Sbjct 551 CACTGTTACGAGTTCAAAAGTTGTCAAAGAGTACTCTTTGAACGTGACTACTAATGATTT 610
Query 470 AGTGCTCACGTTTACTCCCTCGGGTGGTTCGTTTGCGTTTGTGAACGCGATCGAGGTTAT 529
||||||||| ||||||||||| |||||||||||||||||||||| || |||||||||||
Sbjct 611 AGTGCTCACCTTTACTCCCTCTAGTGGTTCGTTTGCGTTTGTGAATGCTATCGAGGTTAT 670
Query 530 ATCGATTCCGGATACATTGATCACTGGTAGTCCAAGGTTTATAGGCAACCCTGTGCAGTT 589
||||||||| ||||| ||||| |||||||||||||||||| |||||||||||| ||||||
Sbjct 671 ATCGATTCCAGATACTTTGATTACTGGTAGTCCAAGGTTTGTAGGCAACCCTGCGCAGTT 730
Query 590 TCCGGATATGTCAATGCAGGGTCTTGAAACCATTCATAGAGTGAACATGGGCGGTCCACT 649
|||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||
Sbjct 731 TCCGGATATGTCAATGCAAGGTCTTGAAACCATTCATAGAGTCAACATGGGTGGTCCGCT 790
Query 650 TGTTGCGGCTAACAACGATACTCTTA-CGAGAACTTGGGTGCCTGATTCGGGGTTTCTGC 708
||||||| ||||||||||||| ||| ||||||||||||||||||| |||| ||||||||
Sbjct 791 TGTTGCGTCTAACAACGATACG-TTAACGAGAACTTGGGTGCCTGACTCGGAGTTTCTGC 849
Query 709 TTGAGAAGAATTTAGCTAAGACTGTGTCTAAGTTTTCAACTGTTAACTTTGTTCCAGGTT 768
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 850 TTGAGAAGAATTTAGCTAAGAGTATGTCTAAGTTTTCAACTGTTAACTTTGTTCCAGGTT 909
Query 769 ATGCAACAGAGGACTCTGCGCCAAGAACCGTATATGGTAGTTGTACTGAGATGAATTCCG 828
||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||
Sbjct 910 ATGCAACAGAGGACTCTGCTCCAAGAACTGTCTATGGTAGTTGTACTGAGATGAATTCCG 969
Query 829 CGGATAACCCGAATAGCATTTTCAATGTCACTTGGGAGTTCGATGTTGAGCCGGGTTTTC 888
| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 970 CTGATAACCCGAATAGCATTTTCAATGTGACTTGGGAGTTCGATGTTGACCCGGGTTTTC 1029
Query 889 AGTACTATTTCCGCTTCCACTTCTGCGATATTGTTAGCTTGTCTTTAAACCAGCTATATT 948
|||||||||||||||| || ||||||||||| ||||||||||| ||||||||||||||||
Sbjct 1030 AGTACTATTTCCGCTTTCATTTCTGCGATATCGTTAGCTTGTCGTTAAACCAGCTATATT 1089
Query 949 TCAATCTTTATGTTGACTCGATGGTCGCTGCTACGGATATTGATCTTAGCACTCTTGTGG 1008
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1090 TCAATCTTTATGTTGACTCAATGGTTGCTGCTACGGATATTGATCTTAGCACTCTTGTGG 1149
Query 1009 ATAACACTTTGGCTGGTGCATACTCGATGGACTTTGTCACGCAGACTCCAAAGGGTAGTA 1068
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 1150 ATAACACTTTGGCTGGTGCATATTCGATGGACTTTGTCACGCAGACGCCAAAGGGTAGTA 1209
Query 1069 ATAAAATCCGTGTGAGCATTGGTCCGTCGACTGTTCACACCGATTATCCAAACGCGATTG 1128
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1210 ATAAAGTCCGTGTGAGCATCGGTCCGTCGACTGTTCACACCGATTATCCAAACGCGATTG 1269
Query 1129 TGAACGGATTGGAGATCATGAAGATGAATAACTCTAAGGGTCAGCTAAGCACCGGGTCAT 1188
|||| ||||||||||| ||||||||||||||||||||||||||| ||||||| ||| |||
Sbjct 1270 TGAATGGATTGGAGATTATGAAGATGAATAACTCTAAGGGTCAGTTAAGCACTGGGACAT 1329
Query 1189 TTGTGCCTGGTAGTAGTTCAAGCAGTAAGCAGAGTAATATCGGGATGATTGTAGGTTCAG 1248
||||||||||||||||||||||||||||| || |||| ||||| |||||||||||||||
Sbjct 1330 TTGTGCCTGGTAGTAGTTCAAGCAGTAAG-AG--TAATCTCGGGTTGATTGTAGGTTCAG 1386
Query 1249 CCATTGGTTCGTTGCTCGCGGTTGTCTTCTTGGGAAGTTGCTTTGTGTTGTATAAGAAGC 1308
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1387 CCATTGGTTCGTTGCTCGCGGTAGTCTTCTTGGGAAGTTGCTTTGTGTTGTATAAGAAGC 1446
Query 1309 GGAAACGTGGCCAAGATGGTCATTCAAAGACTTGGATGCCGTTTTCAATAAACGGAACTT 1368
|||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 1447 GGAAACGTGGCCAAGACGGTCATTCAAAGACTTGGATGCCGTTTTCGATAAATGGAACTT 1506
Query 1369 CGATGGGAAGCAAATACTCCAACGGAACTACGCTTACAAGTATAACTACCAATGCCAATT 1428
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1507 CGATGGGAAGCAAATACTCCAATGGAACTACGCTTACAAGTATAACTACCAATGCCAATT 1566
Query 1429 ACCGTATTCCCTTTGCTGCGGTTAAAGACGCTACAAATAACTTTGACGAGAGTCGCAACA 1488
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1567 ACCGTATTCCCTTTGCAGCGGTTAAAGACGCTACAAATAACTTTGACGAGAGCCGCAACA 1626
Query 1489 TCGGGGTGGGCGGTTTTGGTAAAGTCTACAAAGGAGAGCTTAATGACGGTACAAAGGTAG 1548
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1627 TCGGTGTAGGCGGTTTTGGTAAAGTCTACAAAGGAGAGCTTAATGACGGTACAAAGGTAG 1686
Query 1549 CTGTGAAAAGAGGAAACCCAAAATCTCAGCAAGGGCTTGCGGAATTCAGGACAGAAATCG 1608
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1687 CTGTGAAAAGAGGGAACCCAAAATCTCAGCAAGGGCTTGCGGAATTCAGGACAGAAATCG 1746
Query 1609 AGATGTTATCTCAGTTTCGTCACCGACATTTGGTCTCTCTGATCGGTTATTGTGACGAGA 1668
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 1747 AGATGTTATCTCAGTTTCGTCACCGCCATTTGGTTTCTCTGATCGGTTATTGTGACGAGA 1806
Query 1669 ACAATGAGATGATACTGATTTACGAGTATATGGAGAATGGAACGGTAAAGAGTCATCTTT 1728
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1807 ACAATGAGATGATACTAATTTACGAGTATATGGAGAATGGAACGGTAAAGAGTCATCTTT 1866
Query 1729 ATGGCTCAGGTCTTCCTAGCTTGACTTGGAAACAACGGCTTGAGATCTGCATTGGCGCGG 1788
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1867 ATGGCTCAGGTCTACCTAGCTTGACTTGGAAACAACGGCTTGAGATCTGCATTGGTGCAG 1926
Query 1789 CTAGAGGATTGCATTACCTTCACACGGGTGACTCGAAACCGGTCATTCACAGAGACGTGA 1848
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1927 CTAGAGGCTTGCATTACCTTCACACGGGTGACTCGAAACCGGTCATTCACAGAGACGTGA 1986
Query 1849 AATCTGCAAACATATTACTCGACGAGAACTTCATGGCTAAAGTTGCAGACTTTGGACTGT 1908
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1987 AATCTGCAAACATATTGCTTGACGAGAACTTCATGGCTAAAGTTGCAGACTTTGGACTGT 2046
Query 1909 CCAAGACTGGACCCGAGCTTGATCAAACTCATGTGAGTACTGCTGTCAAAGGAAGTTTTG 1968
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 2047 CCAAGACTGGACCCGAGCTTGATCAGACTCATGTAAGTACTGCTGTCAAAGGAAGTTTTG 2106
Query 1969 GATATCTTGACCCCGAGTACTTCAGAAGGCAACAGCTCACTGAGAAATCCGATGTTTACT 2028
| |||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
Sbjct 2107 GTTATCTTGACCCCGAGTACTTCAGAAGGCAACAGCTCACAGATAAATCCGATGTTTATT 2166
Query 2029 CCTTCGGGGTTGTTCTTTTTGAGGTTCTCTGTGCTAGACCTGTTATAGACCCAACACTTC 2088
||||||| |||||||| || |||||| | |||||||||||||||||||||||||||||||
Sbjct 2167 CCTTCGGAGTTGTTCTCTTCGAGGTTTTATGTGCTAGACCTGTTATAGACCCAACACTTC 2226
Query 2089 CAAGAGAAATGGTGAATCTTGCAGAATGGGCTATGAAATGGCAGAAGAAAGGACAACTAG 2148
||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 2227 CAAGAGAGATGGTGAATCTTGCAGAATGGGCTATGAAATGGCAGAAGAAAGGGCAACTGG 2286
Query 2149 ATCAGATCATCGATCAGTCGCTTCGCGGAAATATCAGACCCGATTCTTTAAGGAAATTTG 2208
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2287 ATCAGATCATCGACCAGTCGCTTCGCGGAAATATCAGACCCGATTCGTTAAGGAAATTTG 2346
Query 2209 CAGAAACAGGTGAGAAATGTTTGGCGGATTACGGAGTTGATAGGCCATCTATGGGAGATG 2268
| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 2347 CGGAAACAGGTGAGAAATGTTTAGCGGATTATGGAGTTGATAGGCCATCTATGGGAGATG 2406
Query 2269 TGTTGTGGAATCTTGAATACGCTCTGCAGCTACAAGAAGCAGTCGTCGATGGCGAACCAG 2328
||||||||||||||||||||||||||||||| |||||||||||| | ||||| |||||||
Sbjct 2407 TGTTGTGGAATCTTGAATACGCTCTGCAGCTTCAAGAAGCAGTCATTGATGGTGAACCAG 2466
Query 2329 AAGATAACAGCACGAATATGATCGGTGAATTACCTCCACAGATCAACAATTTCAGTCAGG 2388
||||||| |||||||||||||| |||||||||||||| |||||||| |||||||||||||
Sbjct 2467 AAGATAATAGCACGAATATGATTGGTGAATTACCTCCGCAGATCAATAATTTCAGTCAGG 2526
Query 2389 GAGACACAAGTGTTAACGTTCCAGGCACAGCGGGGC-AGTTCGAAGAATCGAGCATTGAT 2447
||||||| |||||||||||||| ||||||||||||| | ||||| ||||| || ||||||
Sbjct 2527 GAGACACTAGTGTTAACGTTCCGGGCACAGCGGGGCGA-TTCGAGGAATCTAGTATTGAT 2585
Query 2448 GATCTCTCTGGCGTTTCCATGAGTAAAGTATTCTCACAACTGGTGAAATCTGAGGGAAGA 2507
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2586 GATCTCTCTGGCGTTTCCATGAGTAAAGTATTCTCACAACTGGTGAAATCTGAAGGAAGA 2645
Query 2508 TAGTGAAAGATTTGAGCGATGC 2529
||||||||||||||||| ||||
Sbjct 2646 TAGTGAAAGATTTGAGCAATGC 2667
> AT5G59700.1 | Symbols: | Protein kinase superfamily protein
| chr5:24052385-24055425 REVERSE LENGTH=2861
Length=2861
Score = 1687 bits (913), Expect = 0.0
Identities = 1966/2463 (80%), Gaps = 117/2463 (5%)
Strand=Plus/Plus
Query 96 GATAATTACTTAATCAACTGTGGATCACCAAGCAATGGAACACT-AATGGGTCGAATCTT 154
||||||||| | ||||||||||||||| ||| ||| | || | | | ||||| | ||
Sbjct 228 GATAATTACCTCATCAACTGTGGATCATCAACCAACGTCACTGTCACT-AGTCGAGTGTT 286
Query 155 TATGTCTGATAAGCTCT-CTTCGAACTTACTTACTTCTCCCAAAGAGATTCTCGCAAG-C 212
||| |||||||| || | |||| ||||| || || ||||| || || || ||||| | |
Sbjct 287 TATCTCTGATAACCT-TGCTTCAAACTTTCTAACCTCTCCTAATGAAATCCTCGC-CGCC 344
Query 213 -GAAAGCGTTAA-T-AACGCTGGCTCAGACATTTACCAAACGGCGAGAGTCTTCACC-GA 268
| || || || | || | ||||| |||||||| ||||||||| |||||||| ||
Sbjct 345 AGTAATCG-CAATTCAA--AT---TCAGATATTTACCAGACGGCGAGAATCTTCACCGGA 398
Query 269 AGTCTCT-AGCTACAAATTCTCTATCACTCGTGGTCGTCATTGGGTTCGTCTCTATTTCA 327
| ||||| || |||| |||||| | || | || ||||| ||| |||||||| ||||||
Sbjct 399 A-TCTCTAAG-TACAGATTCTCCGTTGCTAGAGGCCGTCACTGGATTCGTCTCCATTTCA 456
Query 328 ATCCTTTTGACTACCAAAACTTCAAAATGGGT-TCAGCTAAATTCGCAGTTTCGTCACAA 386
|||||||| | |||||||||||| |||| ||| ||||| |||||| | ||||| ||| ||
Sbjct 457 ATCCTTTTCAGTACCAAAACTTCCAAAT-GGTCTCAGCAAAATTCTCTGTTTCTTCAGAA 515
Query 387 AGTCATGTCCTTTTGAGTGATTTCAATGTTAAGAGTACGAGAGTTGTTAAAGAGTACTCT 446
| ||||| |||||||||||||||| || | |||| | |||||| | || || ||||||
Sbjct 516 ACACATGTTCTTTTGAGTGATTTCACTG-T--GAGTTCCAGAGTTATGAAGGAATACTCT 572
Query 447 TTGAATGTGA-CTACCAATGATTTAGTGCTCACGTTTACTCCCTCGGGTGGTTCGTTTGC 505
||||||| | |||| || || | | ||||||||||||||||||||||| ||| |||||
Sbjct 573 CTGAATGT-AGCTACGGATCATCTGGAGCTCACGTTTACTCCCTCGGGTGATTCATTTGC 631
Query 506 GTTTGTGAACGCGATCGAGGTTATATCGATTCCGGATACATTGATCACTGGTAG-TCCAA 564
|||| |||||||| |||||||| | ||| |||| ||||| ||| ||| |||| | |||
Sbjct 632 GTTTCTGAACGCGCTCGAGGTTGTTTCGGTTCCTGATACGTTGTTCAGTGGT-GATCCTT 690
Query 565 GGTTTATAGGCAACCCTGTGCAGTTTC-CGGATATGTCAAT-GCAGGGTCTTGAAACCAT 622
||| ||||| |||| | |||||| || | |||| || ||| | |||||| || |
Sbjct 691 CCTTTGCAGGCAGTCCTGGGAAGTTTCAGGGCT-TGTC-ATGGCAAGCTCTTGAGACGGT 748
Query 623 TCATAGAGTGAACATGGGCGGTCCACTTGTTGCGGCTAACAACGATACTCTTACGAGAAC 682
| |||||||||||||||||||||| | |||| || ||| |||||||||||| ||||||
Sbjct 749 TTATAGAGTGAACATGGGCGGTCCGCGTGTTACGCCTAGTAACGATACTCTTTCGAGAAT 808
Query 683 TTGGGTGCCTGATTCGGGGTTTCT-GCTTGAGAAGAATTTAGCTAAGACTGTGTCTAAGT 741
||||| ||||||||| | |||||| | ||||||||||| ||| ||||| ||||||||||
Sbjct 809 TTGGGAGCCTGATTCTGAGTTTCTAG-TTGAGAAGAATCTAGTTAAGAGTGTGTCTAAGA 867
Query 742 TTTCAACTGTTAACTT-TGTTCCAGGTTATGCAACAGAGGACTCTGCGCCAAGAACCGTA 800
|| || ||||| | || |||||| |||| ||| |||||||| |||| || ||||| ||
Sbjct 868 TTGCATCTGTTGA-TTATGTTCCTGGTTTTGCTACAGAGGAGACTGCTCCTAGAACTGTC 926
Query 801 TATGGTAGTTGTACTGAGATGAATTCCGCGGATAACCCGAATAGCATTTTCAATGTCACT 860
||||||| ||| || ||||||||||| |||||||||||| ||||| |||||||| |||
Sbjct 927 TATGGTACTTGCACCGAGATGAATTCTGCGGATAACCCGTCTAGCAACTTCAATGTGACT 986
Query 861 TGGGAGTTCGATGTTGAGCCGGGTTTTCAGTACTATT-TCCGCTTCCACTTCTGCGATAT 919
||||| ||||||||||| |||||||||||||||| || | || || || |||||||||||
Sbjct 987 TGGGATTTCGATGTTGACCCGGGTTTTCAGTACT-TTCTACGGTTTCATTTCTGCGATAT 1045
Query 920 TGTTAGCT--TGTCTTTAAACCAGCTATATTTCAATCTTTATGTTGACTCGATGG-TCGC 976
|| || | | || |||||||||| || |||||||||||||| ||||| |||| | |
Sbjct 1046 CGTGAG-TAAAG-CTCTAAACCAGCTTTACTTCAATCTTTATGTCGACTCTATGGAT-GT 1102
Query 977 TGCT-ACGGATATTGATCTTAGCACTCTTGTGGAT--AACACTTTG-GCTGGTGCATACT 1032
|| | | | || ||||||| || ||||| | || ||||||||| | ||||||||||
Sbjct 1103 TGTTGA-GAATCTTGATCTGAG--CTCTTATTTATCCAACACTTTGAG-TGGTGCATACG 1158
Query 1033 CGATGGACTTTGTCACGCA-GACTC--C-AAAGGGTAGTAATAA-AATCCGTGTGAGCAT 1087
||||||| ||||||| || || || | ||| | | ||| || |||||||||||||||
Sbjct 1159 CGATGGATTTTGTCA--CAGGA-TCAGCAAAACTG-ACTAA-AAGAATCCGTGTGAGCAT 1213
Query 1088 TGGTCCG-TCGACTGTTCACACCGATTATCCAAAC-GCGATTGTGAACGGATTGGAGATC 1145
||| || |||| ||||||||| ||||| || || |||||| |||||||||| ||||||
Sbjct 1214 CGGT-CGATCGAGTGTTCACACGGATTA-CCCTACTGCGATTCTGAACGGATTAGAGATC 1271
Query 1146 ATGAAGATGAATAACTCTAAGGGTCAGCTAAGCACCGGGTCATTTGTG-CC--TGGTAGT 1202
||||||||||||||||| || ||||||| || | || ||||| || || ||||
Sbjct 1272 ATGAAGATGAATAACTCCAAAAGTCAGCTCAGTATTGGAACATTTTTGCCCAGTGGTTCA 1331
Query 1203 AGTTCAAGCAGTAAGCAGAGTAATATCGGGATGATTGTAGGTTCAGCCATTGGTTCGTTG 1262
||||||| || |||| | || ||| | || ||||| | |||| | | || || || |||
Sbjct 1332 AGTTCAACCACTAAG-A-AG-AATGTTGGTATGATCATTGGTTTAACGATCGGCTCATTG 1388
Query 1263 CTCGCGGTT-GT-CTTCTTGGGAAGTTGCTTTGTGTTGTATAAGAAGCGGA-AACGTGGC 1319
|| || || || || || ||| ||| ||||||| |||| ||||| | || ||| | |
Sbjct 1389 CTTGC-TTTAGTGGTT-TTAGGAGGTTTCTTTGTGCTGTACAAGAAAC-GAGGACGAGAC 1445
Query 1320 CAAGATGGTCATTCAAAGACTTGGATGCCGTTT-TCAAT-AAACGGAACTTCGATGGGAA 1377
||||||||| |||||||||||||||| || ||| || || || ||||| | |
Sbjct 1446 CAAGATGGTAATTCAAAGACTTGGATTCC-TTTGTC-ATCCAATGGAACAAC--T----- 1496
Query 1378 GCAAATACTCCAACGGAACTACGCTTACAAGTATAACTACCAATGCCAATTACCGTATTC 1437
| || ||| || |||||||| ||| |||||||| || ||||| ||| ||| || |||
Sbjct 1497 TC--ATCCTCAAATGGAACTACACTTGCAAGTATAGCTTCCAATTCCAGTTATCGAATT- 1553
Query 1438 CCTTTGCT-GCGGTTAAAGACGCTACAAATAACTTTGACGAGAGTCGCAAC-ATCGGGGT 1495
|||||| | || |||||||| || ||||||| |||||| |||| ||| | | || || ||
Sbjct 1554 CCTTTGGTAGCAGTTAAAGAGGCCACAAATAGCTTTGATGAGAATCG-AGCAATTGGAGT 1612
Query 1496 GGGCGGTTTTGGTAAAGTCTACAAAGGAGAGCTTAATGACGGTACAAAGGTAGCTGTGAA 1555
|| |||||||||||||| ||||||||||||||| | ||||||||||| |||||||| ||
Sbjct 1613 TGGTGGTTTTGGTAAAGTGTACAAAGGAGAGCTTCACGACGGTACAAAAGTAGCTGTTAA 1672
Query 1556 AAGAG-GAAACCCAAAATCTCAGCAAGGGCTTGCGGAATTCAGGACAGAAATCGAGATGT 1614
||||| | || || || ||||||||||| ||||| || ||||||||||||||||| ||||
Sbjct 1673 AAGAGCG-AATCCTAAGTCTCAGCAAGGACTTGCAGAGTTCAGGACAGAAATCGAAATGT 1731
Query 1615 TATCTCAGTTTCGTCACCGACATTTGGTCTCTCTGATCGGTTATTGTGACGAGAACAATG 1674
| || || || ||||| || |||||||| ||| ||||||| || || |||||||| || |
Sbjct 1732 TGTCACAATTCCGTCATCGCCATTTGGTTTCTTTGATCGGATACTGCGACGAGAATAACG 1791
Query 1675 AGATGATACTGATTTACGAGTATATGGAGAATGGAACGGTAAAGAGTCATCTTTATGGCT 1734
||||||| ||| ||||||| ||||||||||||||||| | |||||||| ||||| || |
Sbjct 1792 AGATGATTCTGGTTTACGAATATATGGAGAATGGAACATTGAAGAGTCACCTTTACGGTT 1851
Query 1735 CAGGTCTTCCTAGCTTGACTTGGAAACAACGGCTTGAGATCTGCATTGGCGCGGCTAGAG 1794
||||||||| |||||||| |||||| ||||| |||||||| |||||||| | || ||||
Sbjct 1852 CAGGTCTTCTTAGCTTGAGTTGGAAGCAACGTCTTGAGATATGCATTGGATCAGCAAGAG 1911
Query 1795 GATTGCATTACCTTCACACGGGTGACTCGAAACCGGTCATTCACAGAGACGTGAAATCTG 1854
|||||||||| || ||||| |||||| ||||||| || |||||||||||||| ||||| |
Sbjct 1912 GATTGCATTATCTCCACACCGGTGACGCGAAACCCGTGATTCACAGAGACGTCAAATCCG 1971
Query 1855 CAAACATATTACTCGACGAGAACT-TCATGGCTAAAGTTGCAGACTTTGGACTGTCCAAG 1913
| |||||||| || |||||||| | ||||||||||||||||||||||||||||||| |||
Sbjct 1972 CCAACATATTGCTTGACGAGAA-TCTCATGGCTAAAGTTGCAGACTTTGGACTGTCTAAG 2030
Query 1914 ACTGGACCCGAGCTTGATCAAACTCATGTGAGTACTGCTGTCAAAGGAAGTTTTGGATAT 1973
|| ||||| ||| | ||||| |||||||||||||| || |||||||||||||| ||||||
Sbjct 2031 ACCGGACCGGAGATCGATCAGACTCATGTGAGTACCGCGGTCAAAGGAAGTTTCGGATAT 2090
Query 1974 CTTGACCCCGAGTACTTCAGAAGGCAACAGCTCACTGAGAAATCCGATGTTTACTCCTTC 2033
||||| || || ||||||||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct 2091 CTTGATCCAGAATACTTCAGAAGACAACAGCTCACAGAGAAATCAGATGTTTACTCTTTT 2150
Query 2034 GGGGTTGTTCTTTTTGAGGTTCTCTGTGCTAGACCTGTTATAGACCCAACACTTCCAAGA 2093
|| || ||| | || ||||||||||| || ||||||||||||||||| |||||| | |||
Sbjct 2151 GGAGTGGTTATGTTCGAGGTTCTCTGCGCGAGACCTGTTATAGACCCGACACTTACTAGA 2210
Query 2094 GAAATGGTGAATCTTGCAGAATGGGCTATGAAATGGCAGAAGAAAGGACAACTAGATCAG 2153
|||||||||||||| || |||||||| ||||||||||||||||||||||| || || ||
Sbjct 2211 GAAATGGTGAATCTAGCGGAATGGGCAATGAAATGGCAGAAGAAAGGACAGCTTGAACAC 2270
Query 2154 ATCATCGATCAGTCGCTTCGCGGAAATATCAGACCCGATTC-TTTAAGGAAA-TTTGCAG 2211
|||||||| | ||| || || || || |||||||| || || || | |||| || | |
Sbjct 2271 ATCATCGACCCGTCACTGCGGGGTAAGATCAGACCTGACTCGCTT-A-GAAAGTTCGGTG 2328
Query 2212 AAACAGGTGAGAAATGTTTGGCGGATTACGGAGTTGATAGGCCATCTATGGGAGATGTGT 2271
||||||| ||||||||||| || || || ||||| ||||| ||||| |||||||||||||
Sbjct 2329 AAACAGGGGAGAAATGTTTAGCTGACTATGGAGTCGATAGACCATCAATGGGAGATGTGT 2388
Query 2272 TGTGGAATCTTGAATACGCTCTGCAGCTACAAGAAGCAGTCGTCGATGGCGAACCAGAAG 2331
|||||||||||||||||||| |||||||||||||||| ||||| ||||| || |||||||
Sbjct 2389 TGTGGAATCTTGAATACGCTTTGCAGCTACAAGAAGCTGTCGTTGATGGTGATCCAGAAG 2448
Query 2332 ATAACAGCACGAATATGATCGGTGAATTACCTCCACAGATCAACAATTTCAGTCAGGGAG 2391
| |||||| || ||||||||||| ||||||| || | |||| ||| || || ||||
Sbjct 2449 A---CAGCACAAACATGATCGGTGAGTTACCTCTACGGTTCAATGATTACAACCATGGAG 2505
Query 2392 ACACAAGTGTTAACGTTCCAG--GC-ACAGCGGGGCAGTTCGA--A-GAA---TCGAGCA 2442
|||| ||||||||| || | | || | || ||| | ||| || | ||| |||||
Sbjct 2506 ACACGAGTGTTAACTTTTCTGTAGCTAAAGAGGGACGGTTTGATGAAGAAGAATCGAGTG 2565
Query 2443 TTGATGATC-TCTCTGGCGTTTCCATGAGTAAAGTATTCTCACAACTGGTGAAATCTGAG 2501
|||||||| | || || ||||||||||||||||| ||||| || ||| | |||||||||
Sbjct 2566 TTGATGATAGT-TCAGGTGTTTCCATGAGTAAAGTTTTCTCGCAGCTGATCAAATCTGAG 2624
Query 2502 GGA 2504
|||
Sbjct 2625 GGA 2627
> AT5G61350.1 | Symbols: | Protein kinase superfamily protein
| chr5:24667973-24670501 FORWARD LENGTH=2529
Length=2529
Score = 185 bits (100), Expect = 1e-45
Identities = 433/590 (73%), Gaps = 38/590 (6%)
Strand=Plus/Plus
Query 1741 TTCCTAGCTTGACTTGGAAACAACGGCTTGAGATCTGCATTGGCGCGGCTAGAGGATTGC 1800
|||||| |||| | ||||| ||||| || |||||||||||||| | || | ||| | |
Sbjct 1862 TTCCTACCTTGTCCTGGAAGCAACGTCTAGAGATCTGCATTGGATCAGCGCGTGGACTCC 1921
Query 1801 ATTACCTTCACACGGGTGAC-TCGAAACCGG-TCATTCACAGAGACGTGAA-ATCTGCAA 1857
| || || |||||||||| | || | || |||| ||| | ||||| || | | | |
Sbjct 1922 ACTATCTCCACACGGGTG-CAGCG-CAGGGGATCATCCACCGCGACGTCAAGA-CCACCA 1978
Query 1858 ACATATTAC-TCGACGAGAACTTCA-TGGCTAAAGTTGCAGACTTTGGACTGTC-CAAGA 1914
|||| | | | ||||||||| | | | ||||||||| | || |||||||| || ||||
Sbjct 1979 ACATCCT-CTTGGACGAGAACCT-AGTCGCTAAAGTTTCTGATTTTGGACTTTCAAAAGA 2036
Query 1915 CTGGAC-CCGAGCTTGATCAAACTCATGTGAGTACTGCTGTCAAA-GGAAGTTTTGGATA 1972
| | | || | | ||| || ||||| ||||| || || ||| || ||||| || ||
Sbjct 2037 -T-G-CGCCTA--TGGATGAAGGGCATGTAAGTACCGCGGT-AAAGGGTAGTTTCGGGTA 2090
Query 1973 TCTT-GACCCCGAGTACTTCAGAAGGCAACAGCTCACTGAGAAATCCGATGTTTACTCCT 2031
| || |||||||| |||||| | || ||||| |||||||| ||||||||||||||||| |
Sbjct 2091 T-TTAGACCCCGAATACTTCCGCAGACAACAACTCACTGATAAATCCGATGTTTACTCAT 2149
Query 2032 TCGGGGTTGTTCTT-TTTGAGGTTCTCTGTGCTAGACCTGTTATAGACCCAACACTT-CC 2089
|||| | || | || || |||||||| || || || || || ||| |||| ||| || ||
Sbjct 2150 TCGGTG-TGGTGTTATTCGAGGTTCTTTGCGCGAGGCCAGTGATAAACCC-ACAGTTACC 2207
Query 2090 AAGAGAA-ATGGTGAATCTT-GCAGAATGGGCTATGAAATGGCAGAAG-AAAGGACA-AC 2145
|||||| | || || ||| ||||||| |||||||| | ||| || ||||| |
Sbjct 2208 TAGAGAACA-AGTTAA-CTTAGCAGAATATGCTATGAATTTGCA-TAGAAAAGG-TATGT 2263
Query 2146 TAGATCAGATCATCGATCAGTCGCTTCG-CGGAAATATCAG-ACCCGATTCTTTAAGGAA 2203
| || | |||||||| | | ||| |||| || || | || || ||||||||
Sbjct 2264 TGGAGAAAATCATCGACCCG-AAAATCGTGGGAACGATTAGTAAAGGA-TCGTTAAGGAA 2321
Query 2204 ATTTGCAGAAACAGGTGAGAAATGTTTGGCGGATTACGGAGTTGATAGGCCATCTATGGG 2263
||| | || | | || ||||||||||| || ||||| |||||| | || |||||
Sbjct 2322 ATTCGTGGAGGCTGCAGAAAAATGTTTGGCAGAGTACGGTGTTGATCGACCGGGAATGGG 2381
Query 2264 AGATGTGTTGTGGAATCTTGAATACGCTCTGCAGCTACAAGAAGCAGTCG 2313
|||||||||||||||||||||||| ||| ||||||| ||||||||| |||
Sbjct 2382 AGATGTGTTGTGGAATCTTGAATATGCTTTGCAGCTTCAAGAAGCA-TCG 2430
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 125567858329
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5