BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg937378 Length=697 Score E Sequences producing significant alignments: (Bits) Value AT1G51460.1 | Symbols: | ABC-2 type transporter family protein... 431 5e-120 > AT1G51460.1 | Symbols: | ABC-2 type transporter family protein | chr1:19076982-19081433 REVERSE LENGTH=2285 Length=2285 Score = 431 bits (233), Expect = 5e-120 Identities = 273/293 (93%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 402 GATTCTTCTTTCTCTCTTCACCAACTACATGAAACTTCGAACACATTGGATCCTCTAGAT 461 ||||| |||||||||||||||||||||||||||||| | |||||||| |||||||| ||| Sbjct 951 GATTCATCTTTCTCTCTTCACCAACTACATGAAACTACAAACACATTAGATCCTCTGGAT 1010 Query 462 GATATACCAACAGCAGAAATTAGAACAACTCTTGTCAGAAAATTCAAGTGTTCAGTATAT 521 ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| | ||| Sbjct 1011 GATATACCAACTGCAGAAATTAGAACAACACTTGTCAGAAAATTTAAGTGTTCACTTTAT 1070 Query 522 GCAGCAGCTTCAAAAGCAAGAATTCAAGAAATAACATTGATAGAGGGGCTTGTCACAGAA 581 ||||||||||||| ||||||||||||||||||| ||| ||||| |||| ||||||||||| Sbjct 1071 GCAGCAGCTTCAAGAGCAAGAATTCAAGAAATAGCATCGATAGTGGGGATTGTCACAGAA 1130 Query 582 AGGAAAATGGGAAGCCAAACAAATTGGTGGAAACAACTCAGAATACTTACTCAGCGATCT 641 ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1131 AGGAAAAAGGGGAGCCAAACTAATTGGTGGAAACAACTCAGAATACTTACTCAGCGATCT 1190 Query 642 TTAATCAACATGAGTAGAGACTTGGGGTACTACTGAATGCGGATTGCAGTCTA 694 || |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1191 TTCATCAACATGAGTAGAGACTTGGGGTACTACTGGATGCGGATTGCAGTCTA 1243 Score = 255 bits (138), Expect = 3e-67 Identities = 147/151 (97%), Gaps = 1/151 (1%) Strand=Plus/Plus Query 111 CTTACCAGAGAAGAGATCAGTGACATTGCGGAAGCTACAATCACTGACATGGGTCTTGAA 170 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 456 CTTACCAGAGAAGAGATCAGTGACATTGTGGAAGCTACAATCACTGACATGGGTCTTGAA 515 Query 171 GAATGTTCAGACAGGACCATTGGAAACTGGCATTTGCGTGGAATAAGCGGAGGAGAGAAG 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 516 GAATGTTCAGACAGGACCATTGGAAACTGGCATTTGCGTGGAATAAGCGGAGGAGAGAAG 575 Query 231 AAACGGCTCAGTATTGCCCTCGAGATTCTTA 261 |||||||| ||||||||||||||| | |||| Sbjct 576 AAACGGCTTAGTATTGCCCTCGAGGT-CTTA 605 Score = 222 bits (120), Expect = 3e-57 Identities = 139/148 (94%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 253 AGATTCTTAGAAACATAGCAAGCAGTGGCAAAACTGTGATTTCTTTAATCCATCAGCCGA 312 |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 679 AGATTCTTAGAAACATAGCAAGCAGTGGCAAAACTGTGGTTTCTTCGATCCATCAGCCGA 738 Query 313 GTGGTGAGGTTTTCGCCCTCTTTGATGACATGCTACTTCTGGT-TGGAGGAGAAACCGTT 371 ||||||||||||||||||||||||||||| ||||||||||| | |||||||||||| ||| Sbjct 739 GTGGTGAGGTTTTCGCCCTCTTTGATGACCTGCTACTTCTG-TCTGGAGGAGAAACTGTT 797 Query 372 TACTTTGGCCAAGCAGAATCTTCAACAA 399 ||||||||| ||||||||||| |||||| Sbjct 798 TACTTTGGCGAAGCAGAATCTGCAACAA 825 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 33757346784 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5