BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg937390
Length=2290
Score E
Sequences producing significant alignments: (Bits) Value
AT3G46530.1 | Symbols: RPP13 | NB-ARC domain-containing disease... 1519 0.0
AT3G46710.1 | Symbols: | NB-ARC domain-containing disease resi... 1070 0.0
> AT3G46530.1 | Symbols: RPP13 | NB-ARC domain-containing disease
resistance protein | chr3:17130367-17133338 REVERSE LENGTH=2972
Length=2972
Score = 1519 bits (822), Expect = 0.0
Identities = 1303/1534 (85%), Gaps = 38/1534 (2%)
Strand=Plus/Plus
Query 8 CGATACTGAGAATATGGTAGATGCGATTGCGGGGTTTGTTGTGGGAAAGATCGGCAACTA 67
||||| |||||| |||||||||||||| ||| ||| |||||||||||||||||||||||
Sbjct 80 CGATATTGAGAAGATGGTAGATGCGATCACGGAGTTCGTTGTGGGAAAGATCGGCAACTA 139
Query 68 TCTCATTGAAGAAGCATCAATGTTGATGGCAGTCAAAGACGATCTAGAGGAGCTGAAGAC 127
|||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||
Sbjct 140 TCTCATTGAAGAAGCATCAATGTTTATGGCAGTCAAAGAGGATCTAGAAGAGCTGAAGAC 199
Query 128 AGAGTTGACGTGCATCCAAGGTTATCTCAAGGATGTTGAAGCACGAGAAAGAGAAGACGA 187
||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct 200 GGAGTTGACGTGCATCCATGGTTATCTCAAGGACGTTGAAGCGCGAGAAAGAGAAGATGA 259
Query 188 GGTCTCAAAAGAGTGGACAAAACTGATTTTAGATATCGCTTATGACATTGAGGATGTTTT 247
|||||||||||||||| |||||||| |||||||| ||||||||||| | || ||||||||
Sbjct 260 GGTCTCAAAAGAGTGGTCAAAACTGGTTTTAGATTTCGCTTATGACGTCGAAGATGTTTT 319
Query 248 GGACAGC-TATCACATGAAACTCGAAGAAAGATCACAAAGGCGAGGCTTCAAGAGATGGA 306
||||| | |||||| |||||||||||||||| ||||||||||||||||| | ||||| ||
Sbjct 320 GGACA-CTTATCACTTGAAACTCGAAGAAAGGTCACAAAGGCGAGGCTTGAGGAGATTGA 378
Query 307 CCAACAAATTAGGCAGGAAAATGGATTCGT-CTAGCATAGTTGATGATATCAGAACCCTC 365
|||||||| |||||||||| |||||| ||| | |||||||||||||||||||||| |||
Sbjct 379 CCAACAAAATAGGCAGGAAGATGGATGCGTAC-AGCATAGTTGATGATATCAGAATTCTC 437
Query 366 AAGGGAAGAATCCTAGATGTTACTCGCAAGCGGAAGACGTATGGCATAGGAAACTTCAAT 425
||| ||||||| | ||| | ||||||||| || |||| ||||| |||||| ||| ||
Sbjct 438 AAGAGAAGAATTTTGGATATCACTCGCAAGAGGGAGACTTATGGTATAGGAGGCTTGAAA 497
Query 426 GAGCCTCGAGGAGGAGAGAATAATTTAAGTTCAAGGGTAAGGGAGCTTCCGCATGCTCGA 485
||||||| |||||||| ||||| || ||||| || || || | |||| || |||||||
Sbjct 498 GAGCCTCAAGGAGGAGGGAATACTTCAAGTTTGAGAGTGAGACAACTTCGGCGTGCTCGA 557
Query 486 TTTGTTGATCAAGAAGAGCTTGTAGTTGGTGTGGAAGATGATGCTAAGATTCTTTTGGAA 545
| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 558 TCTGTTGATCAAGAAGAGGTTGTAGTTGGTTTGGAAGATGATGCTAAGATTCTTTTGGAA 617
Query 546 AAGCTTCTTGATGATAG-AGAGAACAAGAGATATATCATCTCCATATTCGGCATGGGAGG 604
|||||||||||| || | |||||| || |||| ||| ||||| || ||||| ||||||||
Sbjct 618 AAGCTTCTTGATTAT-GAAGAGAAAAATAGATTTATTATCTCGATCTTCGGTATGGGAGG 676
Query 605 TCTTGGAAAGACGGCTCTTGCTAGAAAGCTTTATAACTCTTGTGATGTGAA-GAATA-AT 662
||||||||||| || |||||||| ||||| || ||||| | |||||||| ||| | |
Sbjct 677 CCTTGGAAAGACTGCACTTGCTAGGAAGCTCTACAACTCAAGGGATGTGAAGGAA-AGA- 734
Query 663 TTTGAATACCGCACATGGACTTATGTTTCTCAAGAGTATAAAACCAAAGATATGCTTATG 722
|| ||||||||| ||||||||||||||||||||||||||||||| |||||| || |||
Sbjct 735 TTCGAATACCGCGCATGGACTTATGTTTCTCAAGAGTATAAAACTGGAGATATACTAATG 794
Query 723 GGAATCATAAGTTCTTTGGGAGTAATTTCTGGGGAAGATTTGGAAAAGATCAGGATGTTT 782
||||||| || ||||||||| | | |||||||||||| |||||||||||||| | ||||
Sbjct 795 AGAATCATTAGATCTTTGGGAATGACTTCTGGGGAAGAGTTGGAAAAGATCAGAAAGTTT 854
Query 783 TCGGAAGAGGACTTAGAAGTTTACCTTCACAGTCTTCTAGAAGGGAAAAAATATTTGGTG 842
| || || || ||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 855 GCAGAGGAAGAGTTAGAAGTTTACCTTTACGGTCTTCTAGAAGGGAAAAAATATTTGGTG 914
Query 843 GTGGTGGATGATATATGGGAGATAGAAGCGTGGGAGAGCCTGAAGAGAGCTTTACCA-GA 901
||||||||||||||||||||| |||||||||||| ||| | |||||||| ||||| |
Sbjct 915 GTGGTGGATGATATATGGGAGCGAGAAGCGTGGGACAGCTTAAAGAGAGCGTTACCTTGC 974
Query 902 GAATCATAGA-GGAAGTAGAGTCATCATCACAACGCGTATTAGAGCCGTGGCTGAAGGCA 960
|| ||| || |||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 975 -AACCAT-GAAGGAAGTAGAGTCATCATCACTACGCGTATTAAAGCCGTGGCTGAAGGCG 1032
Query 961 TGGACGAGAGAGTCTATGCTCACAACTTAAGGTTTCT-GACATTTGAAGAAAGCTGGAAA 1019
| || | |||| |||||||||| || |||||||| || ||| ||||||||||||||| |
Sbjct 1033 TAGATGGGAGATTCTATGCTCATAAGTTAAGGTT-CTTGACGTTTGAAGAAAGCTGGGAG 1091
Query 1020 CTGTTTGAACAGAA-AGCATTCGGGAATATGCAATGGGTCGATGAAGATCTT-CAGATGA 1077
|||||||||| || ||||||| ||||||| ||| || ||||||||| || | || |
Sbjct 1092 TTGTTTGAACA-AAGAGCATTCAGGAATATACAAAGGAAGGATGAAGAT-TTGCTGAAAA 1149
Query 1078 TTGGGAAAGAAATGATTAAAAAATGTGGTGGCTTACCGCTT-GCTATAGTCGTTCTTG-G 1135
|| ||||||||| || ||||||| | || ||||| ||| | |||||| ||||||| |
Sbjct 1150 CCGGAAAAGAAATGGTTCAAAAATGCAGAGGGTTACCACTTTG-TATAGTTGTTCTTGCG 1208
Query 1136 TGGG-TTTCTGTCGAGGAAAAGACCAAGAGACTGGAATGAGGCGTGTGGCAGTCTCTGGC 1194
||| ||| |||||||||| | |||||| || |||||||| | ||| |||| | |||
Sbjct 1209 -GGGCTTT-TGTCGAGGAAGACACCAAGCGAGTGGAATGATGTTTGTAACAGTTTATGGA 1266
Query 1195 GACGCCTAAAGGATAAATCTATTCATGT--CTTC-ACTGTGTTTGATCTAAGCTTCAAGG 1251
|||||||||||||| | || |||||||| | | | ||||||||||||||| |||||||
Sbjct 1267 GACGCCTAAAGGATGACTCCATTCATGTTGCCCCTATTGTGTTTGATCTAAGTTTCAAGG 1326
Query 1252 AGCTACGACATGAGTTGAAACTGTGCTTTCTTTACCTTAGTATCTTCCCAGAAGACTATG 1311
|||| || ||||||| ||||| || ||||| |||||||||||||||||||| |||||||
Sbjct 1327 AGCTGCGGCATGAGTCCAAACTCTGTTTTCTGTACCTTAGTATCTTCCCAGAGGACTATG 1386
Query 1312 AGATTAACGTAGAGAAGTTGATACGGTTACTTGTGGCAGAAGGGTTTATAGAAGAGGAT- 1370
||||| || ||||||||||||||| |||||||| |||||||| |||||| ||| ||||
Sbjct 1387 AGATTGACCTAGAGAAGTTGATACACTTACTTGTAGCAGAAGGTTTTATACAAGGGGATG 1446
Query 1371 AA-AGA-GATGATGGAAGATGTGGCTCGGTATTATATTGAAGAGCTGATAGACAGAAGTT 1428
|| ||| |||||||||||||||||||||||| || || |||||||||||||| ||||| |
Sbjct 1447 AAGAGATGATGATGGAAGATGTGGCTCGGTACTACATCGAAGAGCTGATAGATAGAAGCT 1506
Query 1429 TGGT-GAAAGCTGAAAGAATAGAGAGAGGAAAGGTAAT-TACTTGTA-AAGTCCATGATC 1485
| | ||| || | |||| ||| |||||||| || || | |||||| || |||||||||
Sbjct 1507 TACTTGAA-GCAGTGAGAAGAGAAAGAGGAAAAGTGATGT-CTTGTAGAA-TCCATGATC 1563
Query 1486 TTCTGAGAGACGTGGCTATCAAGAAAGCCAAAGA 1519
|||||||||||||||||||||||||| | |||||
Sbjct 1564 TTCTGAGAGACGTGGCTATCAAGAAATCTAAAGA 1597
Score = 298 bits (161), Expect = 2e-79
Identities = 407/516 (79%), Gaps = 56/516 (11%)
Strand=Plus/Plus
Query 1520 AAGAGAAGTGGTTCACCATCAGATCAATAGATACTTATCTGAGAAACACCGGAACAAACG 1579
||| |||||||||||||||||| |||| ||||||| ||||||||||| | |||||||||
Sbjct 1658 AAGGGAAGTGGTTCACCATCAGTTCAAGAGATACTCATCTGAGAAACGCAAGAACAAACG 1717
Query 1580 GATGCGATCCTTCTTATTCTTTGGAGAA-TCAGAGGATTTGGTAGGGCGTGATTTTGAAA 1638
||||||||||||||||| |||||||||| || || |||||||||||| |||||||||||
Sbjct 1718 GATGCGATCCTTCTTATACTTTGGAGAATTC-GACCATTTGGTAGGGCTTGATTTTGAAA 1776
Query 1639 CCATTTACTTAAAACTGAAGCTACTTCGAGTGCTTGATCTCGGAGGGGTTCGGTTTCCTT 1698
| | | ||||||||||||||||||||||| ||||| | || || ||||||
Sbjct 1777 -C----A--T-----TGAAGCTACTTCGAGTGCTTGATTTCGGAAGTCTTTGGCTTCCTT 1824
Query 1699 GTGAAGAAGGGAAGAGGAGTTTACCAGAAGTGATTGGGGATCTGATCCACTTGAGGTACC 1758
| || | | || | | ||||||||||||||||||||||||||
Sbjct 1825 -T--------TAA-A--A--TT------A---A-TGGGGATCTGATCCACTTGAGGTACC 1860
Query 1759 TTGGAATTGCTGATACTTTTCTCAGCAATTT--AC----CAGCTTTTATCTCCAACTTAC 1812
||||||||| || || || | ||| | |||| | ||||| |||| ||||| ||||
Sbjct 1861 TTGGAATTGATGGTAATTCTATCAACGATTTTGATATAGCAGCTATTATATCCAAGTTAC 1920
Query 1813 GGTTTCTACAAACACTAGATGCATCTGGCAATGAATCCATC-AGGCAAACAATTGATCTC 1871
||||||||||||||||| || ||||| |||| | | |||| ||| ||||||| ||||||
Sbjct 1921 GGTTTCTACAAACACTATTTGTATCTGACAATTATTTCATCGAGG-AAACAATCGATCTC 1979
Query 1872 CGTAACCTCACATCACTGAGACATGTCATAGGAAAATTCGTTGGAGAATTACTAATAGGC 1931
||||| ||||||||| | ||||||||||||||||| || |||||| ||| || ||||||
Sbjct 1980 CGTAAGCTCACATCATTAAGACATGTCATAGGAAATTTTTTTGGAGGATTGCTTATAGGC 2039
Query 1932 GAC--ACCGTTAACCTTCAGACCTTGAGGTCTATCTCCTCCT-ACAGCTGGAGCAAACTA 1988
||| | || |||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct 2040 GACGTAGCG--AACCTTCAGACCTTGACGTCTATCTCCTT-TGACAGCTGGAACAAACTA 2096
Query 1989 AA-CCATGAGGTTT-TCATAAATCTTCGGGACTTGG 2022
|| || |||| || ||||||||||||| || ||||
Sbjct 2097 AAACC-TGAG-TTGCTCATAAATCTTCGAGATTTGG 2130
> AT3G46710.1 | Symbols: | NB-ARC domain-containing disease resistance
protein | chr3:17206489-17209032 REVERSE LENGTH=2544
Length=2544
Score = 1070 bits (579), Expect = 0.0
Identities = 1244/1548 (80%), Gaps = 113/1548 (7%)
Strand=Plus/Plus
Query 21 ATGGTAGATGCGATTGCGGGGTTTGTTGTGGGAAAGATCGGCAACTATCTCATTGAAGAA 80
|||||||||||||| | | |||||||||||||||||||| |||||||||||| ||||||
Sbjct 1 ATGGTAGATGCGATCACAGAGTTTGTTGTGGGAAAGATCGACAACTATCTCATCGAAGAA 60
Query 81 GCATCAATGTTGAT-GGCAGTCAAAGACGATCTAGAGGAGCTGAAGACAGAGTTGACGTG 139
|| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GCGCCAATGTTGATAGG-AGTCAAAGACGATCTAGAGGAGCTGAAGACAGAGTTGACGTG 119
Query 140 CATCCAAGGTTATCTCAAGGATGTTGAAGCACGAGA-AAGAGAAGACGAGGTCTCAAAAG 198
|||||||| ||||||||| ||||||||| | || || |||||| |||||||||||||
Sbjct 120 CATCCAAGTTTATCTCAAAAATGTTGAAGTTTGTGACAA-AGAAGATGAGGTCTCAAAAG 178
Query 199 AGTGGACAAAACTGATTTTAGATATCGCTTATGACATTGAGGATGTTTTGGACAGCTATC 258
|||||||||||||| ||||||| || ||||||||| | || ||||||||||||| ||||
Sbjct 179 AGTGGACAAAACTGGTTTTAGACATTGCTTATGACGTCGAAGATGTTTTGGACACCTATT 238
Query 259 A-CATGAAACTCGAAGAAAGA-TCACAAAGGCGAGGCTTCAAGAGATGGACCAACA-AAT 315
| ||||||| ||| ||||| | ||| || | |||||| | ||||| |||||||| |||
Sbjct 239 TTC-TGAAACTAGAAAAAAGACT-ACACAGACTAGGCTTGATGAGATTGACCAACATAAT 296
Query 316 TAG-GCAGGAA-AATGGATTCGT-CTAGCATAGTTGATGATATCAGAACCCTCAAGGGAA 372
|| | | || || |||| ||| | | |||| |||||||||||| ||||||||| |||
Sbjct 297 AAGCG-AT-AAGAA-GGATGCGTACAA-CATACTTGATGATATCAAAACCCTCAAAAGAA 352
Query 373 GAATCCTAG-ATGTTACTCGCAAGCG-GAAGACGTATGGCATAGGAAACTTCAATGAGCC 430
||| | | | ||||||||||||| | || || |||||| ||||||||||| |||||||
Sbjct 353 GAA-CTTTGGATGTTACTCGCAAACTTGA-GATGTATGGGATAGGAAACTTTAATGAGCA 410
Query 431 TCGAGGAGGAGAGAATAATTTAAGTTCAAGGGTAAGGGA-GCTTCCGCATGCTCGATTTG 489
||||| || || || || || ||||||| ||||| | ||| || |||||||| ||
Sbjct 411 TCGAGTAGTAGCGAGTACTT------CAAGGGTGAGGGAAG-TTCGGCGTGCTCGATCTG 463
Query 490 TTGATCAAGAAGAGCTTGTAGTTGGTGTGGA-AGATGATGCTAAGATTCTTTTGGA-AAA 547
|||||| ||||||| |||||||||| || | ||||||||||||| |||||||| | |||
Sbjct 464 ATGATCAGGAAGAGCGTGTAGTTGGTTTG-ACAGATGATGCTAAGGTTCTTTTG-ACAAA 521
Query 548 GCTTCTTGATGAT-A-GAG-AGAACAAGAGATATATCATCTCCATATTCGGCATGGGAGG 604
||||||||||||| | | | | ||||||| |||||| ||||||||||||||||||| |||
Sbjct 522 GCTTCTTGATGATGATGGGGATAACAAGATATATATGATCTCCATATTCGGCATGGAAGG 581
Query 605 TCTTGGAAAGACGGCTCTTGCTAGAAAGCTTTATAACTCTTGTGATGTGAAGAATAAT-T 663
||| || ||||| ||||||| |||||||||| ||||||| | ||||||||| | || |
Sbjct 582 TCTCGGGAAGACTTCTCTTGCAAGAAAGCTTTTTAACTCTAGCGATGTGAAGGA-AAGCT 640
Query 664 TTGAATACCGCAC-ATGGACTTATGTTTCTCAAGAGTATAAAACCAA-AGATATGCTTAT 721
||||||| || | ||||||| |||||||| ||| | ||| || || |||||| |||||
Sbjct 641 TTGAATATCG-AGTATGGACTAATGTTTCTGGAGAATGTAATAC-AAGAGATATACTTAT 698
Query 722 GGGAATCATAAGTTCTTTGGGAGTAATTTCTG-GGGA-AGATTTGGAAAAGATCAGGATG 779
| |||||||||| ||||||| || || |||| |||| || || | ||||||| || |
Sbjct 699 GAGAATCATAAGCTCTTTGGAAGAAACATCTGAGGGAGAGCTT-G-AAAAGAT--GGCT- 753
Query 780 TTTTCGGAAGAGGACTTAGAAGTTTACCTTCAC-AGTCTTCTAGAAGGGAAAAAATAT-T 837
| | || | | ||||||||||||||||| | | ||||| ||| ||||| |||| |
Sbjct 754 ----CAGCAG-G-AGTTAGAAGTTTACCTTCATGA-TATTCTACAAGAGAAAAGATATCT 806
Query 838 TGGTGGTGGTGGATGATATATGGGAGA-TAGAAGCGTGGGAGAGCCTGAAGAGAGCTTTA 896
|| ||||||| |||||||||||||||| | ||||| | ||||||| ||||| |||| |||
Sbjct 807 TG-TGGTGGTAGATGATATATGGGAGAGT-GAAGCATTGGAGAGCTTGAAGCGAGCGTTA 864
Query 897 CCA-G-AGA-ATCATAGAGGAAGTAGAGTCATCATCACAACGCGTATTAGAGCCGTGGCT 953
|| | || |||| || | |||||||||||||||||| || ||||||||| |||||||
Sbjct 865 CCTTGCAGCTATCA-AG-G-AAGTAGAGTCATCATCACTACAAGTATTAGAGTCGTGGCT 921
Query 954 GAAGGCATGGACGAGAGAGTCTATGCTCACAACTTAAGGTTTCTGA-CATTTGAAGAAAG 1012
||||||| |||| |||||||||| | || ||| ||||||| || | | ||| |||||||
Sbjct 922 GAAGGCAGGGACAAGAGAGTCTACACCCATAACATAAGGTT-CTTAACGTTTAAAGAAAG 980
Query 1013 CTGGAAACT-GTTTGA-ACAGAAAGCATTCGGGA-ATATGC--AATGGGTCGATGAAGAT 1067
|||||| || |||||| | |||||||||| | | |||| | || || ||||| ||||
Sbjct 981 CTGGAA-CTTGTTTGAGA-AGAAAGCATTTAG-ATATAT-CTTAAAGG-TCGATCAAGAA 1035
Query 1068 CTTCAGATGATTGGGAAAGAAATGATTAAAAAATGTGGTGGCTTACCGCTTGCTATAGTC 1127
|| |||| || || ||||||||| || ||||||||||||| ||||||| | ||| |||
Sbjct 1036 CTGCAGAAAATCGGAAAAGAAATGGTTCAAAAATGTGGTGGATTACCGCGTACTACAGTG 1095
Query 1128 GTTCTTGGTGGGTTTCTGTCGAGGAA-AAGACCAAGA-GACTGGAATGAGGCGTGTGG-C 1184
||||||| ||| || |||| ||||| ||| |||| | || ||||| || | ||||| |
Sbjct 1096 GTTCTTGCCGGGCTTATGTCCAGGAAGAAG-CCAA-ACGAGTGGAACGATG--TGTGGTC 1151
Query 1185 -AGTCTCTGGCGACGCCTAAAGGAT-A-AATCTATTCATGTCTTCACTGTGTTTGATCTA 1241
||| | || || | |||||||| | || | |||||||||| || | ||||||| |||
Sbjct 1152 CAGT-T-TG-CGT-G--TAAAGGATGACAA-C-ATTCATGTCTCCAGTTTGTTTGACCTA 1203
Query 1242 AGCTTCAAGGAGCTACGACATGAGTTGAAA-CTGTGCTTTCTTTACCTTAGTATCTTCCC 1300
||||||||||| | |||||||||| ||| || ||||||||||||||||| |||||||
Sbjct 1204 AGCTTCAAGGATATGGGACATGAGTT-AAAGCTCTGCTTTCTTTACCTTAGCGTCTTCCC 1262
Query 1301 AGAAGACTATGAGATTAACGTAGAGAAGTTGATACGGTTACTTGTGGCAGAAGGGTTTAT 1360
|| ||||||||| | |||||||||| ||||||| ||||||||| ||||||||||||||
Sbjct 1263 CGAGGACTATGAGGTCGACGTAGAGAAATTGATACAGTTACTTGTAGCAGAAGGGTTTAT 1322
Query 1361 AGAAGAGGATAAAGAGATGA---TGGAAGATGTGGCTCGGTATTATATTGAAGAGCTGAT 1417
| |||||||| ||||||||| |||||||||||||| | |||||||||||||| ||| |
Sbjct 1323 ACAAGAGGATGAAGAGATGACGATGGAAGATGTGGCTAGATATTATATTGAAGATCTGGT 1382
Query 1418 AG-ACAGAAGTTTGGTGAAAG-C-TGAAA-GAATAGAGAGAGGAAAGGTAAT-TACTTGT 1472
| ||| ||| || ||| ||| | ||||| ||| ||| || ||||| | || | ||| |
Sbjct 1383 -GTACATAAGCTTAGTGGAAGTCGTGAAAAGAA-AGAAAG-GGAAAC-TGATGT-CTTTT 1437
Query 1473 A-AAGTCCATGATCTTCTGAGAGACGTGGCTATCAAGAAAGCCAAAGA 1519
| || ||||||||||| | ||||| | ||||||||||| |||||||
Sbjct 1438 AGAA-TCCATGATCTTGTAAGAGAATTTACTATCAAGAAATCCAAAGA 1484
Score = 435 bits (235), Expect = 1e-120
Identities = 535/675 (79%), Gaps = 40/675 (6%)
Strand=Plus/Plus
Query 1633 TTGAAACCATTTAC-TTAAAACTGAAGCTACTTCGAGTGCTTGATCTCGGAGGGGTTCGG 1691
||||||||| |||| || ||||||||| |||||||||||||| |||| ||||| |||
Sbjct 1649 TTGAAACCA-TTACTTTGAAACTGAAGTTACTTCGAGTGCTTAATCTTGGAGGACTTCAT 1707
Query 1692 TTTCCTTGTGAA-GA-A-GGGAAGAGGAGTTTACCAGAAGTGATTGG-GGATCTGA-TCC 1746
||| |||| || || | | ||||||||||||| ||||| || || | | | |||
Sbjct 1708 TTTATTTGTCAAGGATATAGCCCTTGGAGTTTACCAGATGTGATCGGAGG-T-TTAGTCC 1765
Query 1747 ACTTGAGGTACCTTGGAATTGCTGATACTTTTCTCAGCAATTTACCAGCTTTTATCTCCA 1806
|||||||||||||||| || || ||||| || | | ||| ||||||| ||| |||||||
Sbjct 1766 ACTTGAGGTACCTTGGGATCGCCGATACCGTTGTGAACAACTTACCAGATTTCATCTCCA 1825
Query 1807 ACTTACGGTTTCTACAAACACTAGATGCATCTGGCAATGAATCCATCAG-GCAAACAATT 1865
|||||||||||||||| |||||||||||||| ||| | | ||| || | || || | |
Sbjct 1826 ACTTACGGTTTCTACAGACACTAGATGCATCAGGC-A--ACTCCTTC-GAGCGAATGACT 1881
Query 1866 GATCTCCGTAACCTCACATCACTGAGACATGTCA-TAGGAAAATTCGTTGGAGAATTACT 1924
||||| |||||||||||||||| || ||| ||| | |||| |||| | |||||||| ||
Sbjct 1882 GATCTAAGTAACCTCACATCACTAAGGCATCTCACT-GGAAGATTCATCGGAGAATTGCT 1940
Query 1925 AATAGGCGACACCGTTAACCTTCAGACCTTGAGGTCTATCTCCTCCTACAGCTGGAGCAA 1984
||||||||| | || || ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1941 TATAGGCGACGCAGTGAATCTTCAGACCTTGAGGTCTATCTCCTCCTATAGCTGGAGCAA 2000
Query 1985 ACTAAACCATGAGGTTT-TCATAAATCTTCGGGACTTGGAAATCTTTGA-TTCCA--TGT 2040
|||||| |||||| || |||||||||||||||||||||| |||| || ||||| | |
Sbjct 2001 ACTAAAACATGAG-TTACTCATAAATCTTCGGGACTTGGAGATCTACGAGTTCCACATAT 2059
Query 2041 GGGTGGATCAGAGAGGAGTTTCTTTGGACTTGGCTTCCTTCTCTAAACTGAAAAATCTTC 2100
| || || | | |||| |||||||||| | |||||| || ||||| ||||||||||
Sbjct 2060 TGAACGACCAAATAAAAGTTCCTTTGGACTTAGTTTCCTTATCGAAACTCAAAAATCTTC 2119
Query 2101 GTGCCTTGACGCT-GAAGGTA-TCAACCTTCAAG-TTATCTTCAGAATCGGAAGAAACAG 2157
||| ||||| | | |||| || | |||||| | |||| ||| || |||||||||
Sbjct 2120 GTGTCTTGAAGATTGAAG-TAGTGT-CCTTCA-GCTTATTTTC-----CG-AAGAAACAG 2170
Query 2158 TTCGGTTCCAAAC-CCTTGTTGAGCTGACACTGCGTTGCGATATAAGGAGACTTCCCA-A 2215
|||| ||| || | |||||| |||| ||||||| |||||| |||| |||||||||| |
Sbjct 2171 TTCGTTTCGAA-CTCCTTGTCAAGCTAACACTGCATTGCGACGTAAGAAGACTTCCCAGA 2229
Query 2216 GGACATGGATGTGATCTTTCCTAGTCTTGAGTCACTTACACTTGTCAGATTATGTCTCGA 2275
| |||||||| |||||||||| ||||||||||| || |||||||| | | || || | |
Sbjct 2230 G-ACATGGATTTGATCTTTCCCAGTCTTGAGTCCCTGACACTTGTAACAA-ATCTC-CAA 2286
Query 2276 GGAAGATCCAATGCC 2290
| |||| ||||||||
Sbjct 2287 G-AAGACCCAATGCC 2300
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 113654033880
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5