BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg937473 Length=449 Score E Sequences producing significant alignments: (Bits) Value AT4G31115.2 | Symbols: | Protein of unknown function (DUF1997)... 183 9e-46 AT5G18500.1 | Symbols: | Protein kinase superfamily protein | ... 115 3e-25 AT5G17990.1 | Symbols: TRP1, pat1 | tryptophan biosynthesis 1 |... 104 7e-22 > AT4G31115.2 | Symbols: | Protein of unknown function (DUF1997) | chr4:15130075-15132035 FORWARD LENGTH=1181 Length=1181 Score = 183 bits (99), Expect = 9e-46 Identities = 119/129 (92%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 222 AGAAATTAATGGAGAAAAGAAGCTGACTTTCAATGAGTTTTTGAAAGACCCATCTGGCAT 281 ||| ||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||| Sbjct 450 AGAGATTAATGGAGAAAAGGAGCTGACTTTCAGTGAGTTTTTGAAACACCCATCTGGCAT 509 Query 282 GGAGGCTGTGATCAACGCTAAGGCTTTGCAGAGTTATCATTTAATTGAGGATACTGATAA 341 |||||||||||||||||| ||||||||||||||||| |||||| |||| |||| |||| | Sbjct 510 GGAGGCTGTGATCAACGCAAAGGCTTTGCAGAGTTACCATTTAGTTGATGATAGTGATGA 569 Query 342 TACTTACAG 350 ||||||||| Sbjct 570 TACTTACAG 578 > AT5G18500.1 | Symbols: | Protein kinase superfamily protein | chr5:6138489-6141630 FORWARD LENGTH=2007 Length=2007 Score = 115 bits (62), Expect = 3e-25 Identities = 64/65 (98%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 361 GTGCACAGAGACATTAAGTCTAGCAACATTCTGATTGATGACAAATTCAATTCTAAAATT 420 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1070 GTGCACAGAGACATTAAGTCTAGTAACATTCTGATTGATGACAAATTCAATTCTAAAATT 1129 Query 421 TCTGA 425 ||||| Sbjct 1130 TCTGA 1134 > AT5G17990.1 | Symbols: TRP1, pat1 | tryptophan biosynthesis 1 | chr5:5957213-5959905 FORWARD LENGTH=1676 Length=1676 Score = 104 bits (56), Expect = 7e-22 Identities = 77/87 (89%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 143 AGTTTTTGTC-GAACGAGGCAAACGATGCACTAATTAGTGCCTTTCTGGTTCTCCTGAGA 201 |||||||| | ||| ||||||||||| || || || ||||||||||| ||||| |||||| Sbjct 509 AGTTTTTG-CTGAATGAGGCAAACGAGGCGCTGATCAGTGCCTTTCTAGTTCTTCTGAGA 567 Query 202 GCTAAAGGAGAGACATACGAAGAAATT 228 ||||||||||||||||||||||| ||| Sbjct 568 GCTAAAGGAGAGACATACGAAGAGATT 594 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21363793325 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5