BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg937476 Length=1825 Score E Sequences producing significant alignments: (Bits) Value AT3G47400.1 | Symbols: | Plant invertase/pectin methylesterase... 2828 0.0 > AT3G47400.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr3:17465590-17468118 FORWARD LENGTH=2054 Length=2054 Score = 2828 bits (1531), Expect = 0.0 Identities = 1730/1828 (95%), Gaps = 5/1828 (0%) Strand=Plus/Plus Query 1 ATAGCCAAGAACTTC-AAAAAATGCTTAGAGGCATCTTCCACATTTGCCTCTTGGCCTCA 59 ||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 19 ATACCCAAGAACTTCAAAAAAATGCTTAGAGGCATCTTTCACATTTGCCTCTTGGCCTCA 78 Query 60 TTTCTTCTTCTACCGTTCTCCTCTGCTGTACACGATAGTGGCTTCACCGGTGGTACCGAT 119 ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| Sbjct 79 TTTCTTCTTCTACCGTTCTCCTCCGCCGTACATGATAGTGGCTTCACCGGTGGTACCGAT 138 Query 120 GCTCCTCCTCCGTGGGACCATAATGTTTCCACACCACCAGAAGCCTCACCATCCCCAACC 179 |||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| Sbjct 139 GCTCCTCCTCCGTGGGACCATAATGTTTCCCCACCACCAGAAACCGCACCATCCCCAACC 198 Query 180 CCCACCTCGAGTCCTTCTACCGCCTCTCCACCGTCTCCCGGACCAGTGGCTGCACCATCT 239 |||||||||||||| ||||| |||| || || ||||| ||||| |||||||| |||||| Sbjct 199 CCCACCTCGAGTCCCTCTACAACCTCACCGCCATCTCCTGGACCGGTGGCTGCGCCATCT 258 Query 240 CCGATCAACAACGGCTCTGTCTCTGGAGACATGACATGGTGGTGCAACAAGACTCCACAC 299 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 259 CCGATCAACAACGGCTCTGTCTCCGGGGACATGACATGGTGGTGCAACAAGACTCCACAC 318 Query 300 GCTGAGACATGCAATTACTACTTCCGGAAGAGCTCACAAAACAACATTAACATACGACCA 359 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 319 GCTGAGACATGCAATTACTACTTCCGGAAGAGCTCACAAAACAACATTAACCTACGACCA 378 Query 360 CCAAGGTTCCGGTCCGAGTTCTTACGAATGCTGGTCAAGATAGCACTTGACCAAGCCGTA 419 |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct 379 CCAAGGTTCCGGTCCGAGTTCTTACGGATGCTGGTCAAGGTAGCACTTGACCAAGCCGTG 438 Query 420 ATCACACACAGTCAAACCGTTAAGTTCGGACCAAGCTGCACCAACAACCAAAGGAAAGCC 479 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 439 ATCACACACAGTCAAACCGTTAAGTTTGGACCGAGCTGCACCAACAACCAAAGGAAAGCC 498 Query 480 GCTTGGTCAGACTGCGTAAAGCTCTTTCAAAACACGGTGACTCAGCTAAACCGAACGCTC 539 |||||||||||||||||||| ||||| |||||||||||| ||||||| |||||||||||| Sbjct 499 GCTTGGTCAGACTGCGTAAATCTCTTCCAAAACACGGTGGCTCAGCTGAACCGAACGCTC 558 Query 540 AAGGGACTTAACCCGGCGGCTAAGGA-TGATGTCAAGTGTACAGACTTCGACGCACAGAC 598 ||||||||||||||||||||| || ||||||||| ||||| |||||||||||||| || Sbjct 559 AAGGGACTTAACCCGGCGGCT-TCGAGTGATGTCAAATGTACGGACTTCGACGCACAAAC 617 Query 599 TTGGCTCAGCACGGCTCAAACCAACATTGAAACGTGCCGGTCCGGATCCGAGGATCTTAA 658 ||||||||||||||||| |||||||| || |||||||| |||||||||||||||||||| Sbjct 618 GTGGCTCAGCACGGCTCAGACCAACATCGAGACGTGCCGTTCCGGATCCGAGGATCTTAA 677 Query 659 CGTCTCAGATTTCGTCATGCCGGCGATATCTAACAAGAACTTGTCGGATTTGATTGGAAA 718 |||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct 678 CGTCTCGGATTTCGTCATGCCGGTGATATCCAACAAGAACTTGTCGGATTTGATTGGAAA 737 Query 719 CTGCTTGGCCGTCAATGGAGTTCTCATGAAGCAACATAATCATACGACTGCTGCTAACCA 778 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 738 CTGCTTGGCCGTCAATGGAGTTCTCATGAAGCAACATGATCATACGACTACTGCTAACCA 797 Query 779 CAAAGAATACTTCCCAAGCTGGGTTTCAAGACACGAGAGAAAATTACTCGTATCAGCCAC 838 ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| | Sbjct 798 CAAAGAATACTTCCCAAGCTGGGTTTCAAGACATGAGAGACGATTACTCGTATCAGCCTC 857 Query 839 TTTAGCGAAATCGATG-CCTCACCTAGTGGTGGCACAAGACAGGTCCGGCCATTTCCGGT 897 |||||||||||||| | || |||||||||||||||||||||||||||||||||||||||| Sbjct 858 TTTAGCGAAATCGA-GTCCCCACCTAGTGGTGGCACAAGACAGGTCCGGCCATTTCCGGT 916 Query 898 CGATCCAAGCTGCCATAAACTTCGCAGCAAAAAGGAGATTCAAGTCAAGATTTGTGATAT 957 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct 917 CGATCCAAGCTGCCATAAACTTCGCAGCGAGAAGGAGATTCAAGTCAAGATTTGTGATAT 976 Query 958 ATGTGAAGAAAGGTGTTTACCGAGAGAACATTGATGTCGGAAATGATAACCACAACATCA 1017 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 977 ATGTGAAGAAAGGTGTTTACCGAGAGAACATTGATGTCGGCAATGATAACCACAACATCA 1036 Query 1018 TGCTAGTCGGTGATGGCGAGAGAAAAACAATCATCACAAGTGGCCGAAGCGTCCAGCACG 1077 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1037 TGCTCGTCGGAGATGGCGAGAGAAAAACAATCATCACAAGTGGCCGAAGCGTCCAGCATG 1096 Query 1078 GCTACACCACCTATAACTCTGCAACCGCCGGCTTTGGAGGCCAAAGGTTCGTAGCAAAAG 1137 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct 1097 GCTACACCACCTATAACTCTGCAACCGGCGGCTTTGGAGGCCAAAGGTTTGTAGCAAAAG 1156 Query 1138 ACATGACATTCATCAACACGGCGGGGCCATTACGTGGGCAAGCTGTGGCGGTTCGATCAT 1197 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 1157 ACATGACATTCATCAACACGGCCGGGCCATTACGTGGGCAAGCTGTTGCGGTTCGATCAT 1216 Query 1198 CCTCTGACCTCGCTGTTTTCTACCGTGTTGGTATCCATGGCTTCCAAGACACGCTCTACA 1257 ||||||||||| |||||||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct 1217 CCTCTGACCTCTCTGTTTTCTACCGTGTCGGTATCCATGGATTCCAAGACACCCTCTACA 1276 Query 1258 TTCACTCACAACGTCAGTTCTTTAGGGAATGTTACATCTCAGGCACCATCGACTTTATCT 1317 | || |||||||| |||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 1277 TCCATTCACAACGCCAGTTCTTTAGGGAATGTTATATCTCAGGCACCATCGACTTCATCT 1336 Query 1318 TTGGAAATGCAGCTGTTGTGTTCCAGAACTGCATGATTCTTGTCCGAAGACCTCTCCATG 1377 | ||||||||||||||||| |||||||||||||||||||| ||||| | ||||| |||| Sbjct 1337 TCGGAAATGCAGCTGTTGTCTTCCAGAACTGCATGATTCTCGTCCGGCGCCCTCTTCATG 1396 Query 1378 GCCAAGCCAACATCATAACCGCACAAGGTCGCGGTGACCCTTTTCAAAATACAGGGATAA 1437 ||||||||||||||||||| || |||||||| |||||||||||||| || ||||| |||| Sbjct 1397 GCCAAGCCAACATCATAACAGCTCAAGGTCGTGGTGACCCTTTTCAGAACACAGGAATAA 1456 Query 1438 CCATCCATAGCTCAAGGATAATCGCGGCATCTGATTTGAAGCCTGTGATTCGAGCTTACA 1497 | |||||||||||||||||||| || || |||||||||||||||||||| |||||||||| Sbjct 1457 CAATCCATAGCTCAAGGATAATTGCAGCTTCTGATTTGAAGCCTGTGATCCGAGCTTACA 1516 Query 1498 AGACCTATTTAGGCCGACCGTGGCAAGCTTATTCACGCGTCACAATCATGAAGACCTATA 1557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1517 AGACCTATTTAGGCCGACCGTGGCAAGCTTATTCACGCGTCACAATCATGAAGACCTATA 1576 Query 1558 TAGATAACTCGATCAGCCCCTTGGGATGGTCTCCTTGGTTAAGAGGATCCAATTTTGCTC 1617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1577 TAGATAACTCGATCAGCCCCTTGGGATGGTCTCCTTGGTTAAGAGGATCCAATTTTGCTC 1636 Query 1618 TTAATACAGTTTTCTATGGAGAGTATAAAAATTTTGGGCCGGGGTCTTCCACAAGATGGC 1677 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1637 TTAATACAGTTTTCTATGGAGAGTATAAAAATTTTGGACCGGGGTCTTCCACAAGATGGC 1696 Query 1678 GGGTCCGGTGGAAAGGATTCCACGCCATAACGAGCACCGCGGTTGCTTCTCGGTTTACTG 1737 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1697 GGGTCCGGTGGAAAGGATTCCACGCCATAACGAGCACCGCGGTTGCTTCTCGGTTTACGG 1756 Query 1738 TGGGAAGTCTTATCGCCGGCGGCTCATGGTTGCCAGCCACTGGCGTGCCGTTCAAGTCAG 1797 | ||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct 1757 TTGGAAGCCTTATAGCCGGCGGTTCATGGTTGCCAGCCACTGGCGTGCCTTTCAAGTCAG 1816 Query 1798 GGTTGTGAGGAGAGTCAGCATGTCCTAT 1825 |||||||||||||||||||||||||||| Sbjct 1817 GGTTGTGAGGAGAGTCAGCATGTCCTAT 1844 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 90310780455 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5