BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg937499
Length=2159
Score E
Sequences producing significant alignments: (Bits) Value
AT3G47090.1 | Symbols: | Leucine-rich repeat protein kinase fa... 850 0.0
AT3G47580.1 | Symbols: | Leucine-rich repeat protein kinase fa... 741 0.0
> AT3G47090.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:17341512-17344645 REVERSE LENGTH=3030
Length=3030
Score = 850 bits (460), Expect = 0.0
Identities = 751/888 (85%), Gaps = 34/888 (4%)
Strand=Plus/Plus
Query 1210 TAGGAAACATCACTCGGTTAGTATACCTCTATTTTTCCAACAATAGTTTTGATGGAACCA 1269
|||| ||| | |||| ||||||| | || ||||| ||||||||||||||||| |||| |
Sbjct 1289 TAGGCAACCTTACTCAGTTAGTAAAACTATATTTATCCAACAATAGTTTTGAAGGAATCG 1348
Query 1270 TTCCTCCGAGTCTTGGAAAATGTAGTCAGC-TACTAGACTTACGAG-TTGGGTATAATAA 1327
|||||||||||||||| | |||||||| | | || ||||||| || |||||||||||||
Sbjct 1349 TTCCTCCGAGTCTTGGTGATTGTAGTCA-CATGCTCGACTTAC-AGATTGGGTATAATAA 1406
Query 1328 GTTGAATGGGACTATACCTCAA-GAAATTATGGTAATTCGATCGCTTACTAC-CCTCAGC 1385
||| ||||||||||||||| || || || ||| ||| | | | ||| | | ||||| |
Sbjct 1407 GTTAAATGGGACTATACCT-AAGGAGATCATGCAAATCCCAACCCTT-GTTCACCTCAAC 1464
Query 1386 ATGTCAA-ATAATTATTT-ATCTGGCTCTCTAGCAAAAGATGTTGGACGATTACAGAATC 1443
||| || ||||| ||| | |||||||||| |||| ||| ||||| ||||||| ||||
Sbjct 1465 ATG-GAATCTAATTCTTTGA-GTGGCTCTCTACCAAACGATATTGGAAGATTACAAAATC 1522
Query 1444 TCGTTCGA-CTATCTGTTTCGG-CTAATAAATTATCAGGGGAGCTCCCACAGACTTTGGG 1501
| ||| || |||| | || || |||||| |||||||| | |||||||| ||||||||
Sbjct 1523 TTGTT-GAGCTAT-TACTTGGGAATAATAACTTATCAGGACATCTCCCACAAACTTTGGG 1580
Query 1502 AAACTGT-TTCTCGATGGAATTTATGTATCTACAAGGAAATTC-TTTTGATGGAGCCATT 1559
||| ||| || ||||||||| |||| ||||||||| |||| | |||||||||| |||||
Sbjct 1581 AAAATGTCTT-TCGATGGAAGTTATTTATCTACAA-GAAAACCATTTTGATGGAACCATT 1638
Query 1560 CCAGATATAAGAA-AGTTGGTGGGTGTTAAAGAA-GTTGATTTATCGAATAATAATCTGT 1617
|||||||||| || |||| ||||||||||| || |||||||| || || |||||||| |
Sbjct 1639 CCAGATATAA-AAGGGTTGATGGGTGTTAAA-AACGTTGATTTGTCAAACAATAATCTCT 1696
Query 1618 CCGGAAGTATACCTGTATATATTGCAAACTTCTCCTCGTTGCAATATCTTAATCTATCC- 1676
| ||||||||| ||| |||| ||| |||||| ||| |||| ||||||| |||||||||
Sbjct 1697 CTGGAAGTATATCTGAATATTTTGAAAACTTTTCCAAGTTGGAATATCTCAATCTATCCG 1756
Query 1677 ATTAACAATTTTGAGGGAATG-GTGCCAACAGAAGGAAAATTTCAGAACT-CTACTATAG 1734
| ||||||||| ||||||| | || ||||||||||||| |||||| || | ||||| |||
Sbjct 1757 A-TAACAATTTCGAGGGAA-GAGTCCCAACAGAAGGAATATTTCA-AAATGCTACTTTAG 1813
Query 1735 TTT-TGCTATTTGGAAACAAAAATCTATGTGGAGGTATCAAGGAACTGAAACTAAAGCCA 1793
||| | |||| |||||||||||||| |||||| | ||||||||||||||||||||||||
Sbjct 1814 TTTCAG-TATTCGGAAACAAAAATCTTTGTGGAAGCATCAAGGAACTGAAACTAAAGCCA 1872
Query 1794 TGCATTGCGGTAGCACCACTAATGGAGACAAAGCA-CCTATCTCTTTTAAAGAAAGTTGT 1852
|||||||| |||||||| | ||||||||| ||| || ||||||||| ||||||||||
Sbjct 1873 TGCATTGCCCAAGCACCACCAGTGGAGACAAGGCATCC-ATCTCTTTTGAAGAAAGTTGC 1931
Query 1853 GATCGGGGTCAGCGTAGGCATAGCTTTCCTTTTGCTATTGTTCATAGTTTCTCTACGTTG 1912
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||
Sbjct 1932 GATTGGGGTCAGCGTAGGCATAGCTTTGCTTTTGCTATTGTTCATAGTTTCTCTAAGCTG 1991
Query 1913 GTTCATAAAAAGAAAGAAGAACCAGAAGACCAATAATTCAGCTGCGTCTACATTGGAGAG 1972
||||| |||||||||||| |||||||||| ||||||||||||| | | |||||||||||
Sbjct 1992 GTTCAAAAAAAGAAAGAACAACCAGAAGATCAATAATTCAGCTCCTTTTACATTGGAGAT 2051
Query 1973 TTTCCATGAAAAGATAAGTTATGGAGTTCTACGAAATGCGACAGATGGCTTCTCTTCAAG 2032
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 2052 TTTCCATGAAAAGCTAAGTTATGGAGATCTACGAAATGCGACAGATGGCTTCTCTTCGAG 2111
Query 2033 CAATATGGTTGGGTCAGGCAGTTTTGGTACTGTGTTTAAGGCATTGCT 2080
|||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 2112 CAATATAGTTGGGTCAGGTAGTTTTGGTACTGTGTTTAAGGCATTGCT 2159
Score = 701 bits (379), Expect = 0.0
Identities = 942/1202 (78%), Gaps = 86/1202 (7%)
Strand=Plus/Plus
Query 35 TTTACTTGCTTTGAGTACTCTTATGTTACTTGAAGCATATCGTTTTACTGATGAAACTGA 94
|||||||||||| | | |||| ||| ||| ||||||||| ||||||| ||||||| |||
Sbjct 15 TTTACTTGCTTTCAATGCTCTCATGCAACTCGAAGCATATGGTTTTACCGATGAAAGTGA 74
Query 95 TAGGCAAGCGTTGTTGGAGTTCAAGTCTCAAGTTTCTGAAGGCAGAAGAGATGTGTTGTC 154
||||||||||||||||||| |||||||||||||||||||| ||| ||| |||| |||||
Sbjct 75 TAGGCAAGCGTTGTTGGAGATCAAGTCTCAAGTTTCTGAAAGCAAAAGGGATGCCTTGTC 134
Query 155 CTCATGGAATAATTCATTCCCTCTTTGCCGCTGGAAAG-GGGTTAGATGTGGCCGCAAAC 213
| | |||||||| ||||||||||| ||| ||||| ||| |||||||||||||||||||||
Sbjct 135 CGCGTGGAATAACTCATTCCCTCTCTGCAGCTGG-AAGTGGGTTAGATGTGGCCGCAAAC 193
Query 214 ACAAGAGAGTCACAC-TTATGGACCTC-AACGGATTGCAGTTAGGCGGAGTGATATCACC 271
|||||||||| || | || |||||||| | ||||||||||| || ||||||||||||||
Sbjct 194 ACAAGAGAGTTACTCGTT-TGGACCTCGGA-GGATTGCAGTTGGGAGGAGTGATATCACC 251
Query 272 ATCTATTGGTAATCTTTCCTTTCTCATATCA-CTTAATCTCTCTGATAACTCTTTTGGTG 330
|||||||||||||||||| |||||||||| | ||| | |||||| |||||||||||||||
Sbjct 252 ATCTATTGGTAATCTTTCGTTTCTCATAT-ATCTTGACCTCTCTAATAACTCTTTTGGTG 310
Query 331 GCACCATCCCTCGAGAGGTTGGAAACTTGTTCAGACTTGAACATTTGGATATGAGCTTTA 390
| |||||||||| |||| | ||||||||||| |||||| || |||||| | || ||||||
Sbjct 311 GAACCATCCCTCAAGAGATGGGAAACTTGTTTAGACTTAAATATTTGGCTGTGGGCTTTA 370
Query 391 ATT-TCCTCAAAGAAGGGATTCCAATCAGTCTATATAACTGCTCTAGATTGGCGGAGTTT 449
||| || | ||| || ||||||| |||| | | ||||||||||||||| | | ||
Sbjct 371 ATTATC-TGGAAGGAGAGATTCCAGCCAGTTTGTCCAACTGCTCTAGATTGTTGTACCTT 429
Query 450 TATTTATTTTCAAATCA-TCTTGGAGGA-GGTGTTCCTTCAGAAATAGGGTCATTGACGA 507
||||||||||||| || |||||||| | ||||||||||||||| |||||||||||| ||
Sbjct 430 GATTTATTTTCAAA-CAATCTTGGAG-ACGGTGTTCCTTCAGAACTAGGGTCATTGA-GA 486
Query 508 A-GCT-CGTTGAAT-TAGATCTTGGCCAAAACGACTTGAAAGGGAAGCTCCCAGCATCTC 564
| ||| | || | | || ||||||| | ||||||| | ||||| ||| |||| | || |
Sbjct 487 AAGCTTCTTT-A-TCTATATCTTGGTCTAAACGACCTCAAAGGAAAGTTCCCCGTATTTA 544
Query 565 TAGGAAACTTGACATCACTCATGGAAGTT-AGCTTT--ACCACTAA-CAATATAGAAGGG 620
|| |||||||||| || || || | | | | ||| | | ||| || | | |||||
Sbjct 545 TACGAAACTTGACGTCTCTAATAGT-GCTCAACTTGGGAT-A-TAATCA-TCTGGAAGGA 600
Query 621 GAAATTCC-GAATGATATAGGTA-GATTGACTCAAATAGTGGCGCTT-CAATTATCAGCG 677
|||||||| || |||||||| || | | || |||||| ||| | ||| || ||| || |
Sbjct 601 GAAATTCCAGA-TGATATAGCTATGCT-GAGTCAAATGGTGTCTCTTACA-TTAACAATG 657
Query 678 AACAAATTCTCAGGTGTTTTTCCTCCTTCCATCTACAATTTGTCCACACTTTTGTTTTTA 737
||||| ||||| || |||||||||||| | ||||||| |||||| ||||| | ||||
Sbjct 658 AACAACTTCTCTGGCGTTTTTCCTCCTGCTTTCTACAACTTGTCCTCACTTGAGAATTTA 717
Query 738 AATATCTTTGGTTGTGGCTTT-TCGGGTAGTTT-AAGGCCTGATTTTGGTAATTTGCTAC 795
| || ||||| ||| ||| ||||||| || ||| ||||||||||||||| ||||||
Sbjct 718 TACCTCCTTGGTAATGG-TTTCTCGGGTAACTTGAAG-CCTGATTTTGGTAATCTGCTAC 775
Query 796 CAAACCTTGAACA-TATATATATGGGAGGGAATTATTTC-A-CAGGAGCCATTCCAATAA 852
||||| || | | | ||| | || | |||| | |||| | |||||||||| |||| ||
Sbjct 776 CAAACATTCATGAGT-TATCTTTGC-ATGGAAAT-TTTCTAACAGGAGCCATCCCAACAA 832
Query 853 CACTTCCCATTATCTCGAA-TCTTCAAGTGTTGGGAATGGAGGACAA-CAATCTAAGAGG 910
||||| ||| ||| || || ||| || |||| ||||| | | | || || | | |||
Sbjct 833 CACTTGCCAATATTTC-AACTCTGGAAATGTTTGGAATTG-GTAAAAACAGGATGACAGG 890
Query 911 TAGTAT-TCCTCC-AAGTTTTGGACAAGTACCA-AACTTGCAAT-CTCTA-AATTTTCGT 965
||||| || ||| || ||| ||| || || | || ||||| | | ||| || || |
Sbjct 891 AAGTATCTC-TCCCAACTTT-GGAAAACTAG-AGAATTTGCATTAC-CTAGAACTT--G- 943
Query 966 GCTAACCAATT----GGGTAGTCGCTCTTTTGGAGATCTTG-ATTTTCTTGGTGCTTTAA 1020
||||| |||| ||| ||| ||||||||||||||||| |||| |||| |||||| |
Sbjct 944 -CTAAC-AATTCTTTGGGAAGTTACTCTTTTGGAGATCTTGCATTT-CTTGATGCTTTGA 1000
Query 1021 CTAATTGCTCTCAACTACAAGTGGT-AGAC-GT-AGGTGAAAATTGGCTTGGGGGTGACT 1077
|||||||||| || | || | ||| | | || || | | ||| |||||||||||| ||
Sbjct 1001 CTAATTGCTCCCATTTGCATG-GGTTAT-CTGTGAGTT-ACAATAGGCTTGGGGGTG-CT 1056
Query 1078 T-GCCTA-ATTCCATTGCCAATCTGTCTA-GGAACCTCAT-GTATTT-AAGCCTTCAAAC 1132
| ||||| || |||||| |||| |||| | ||||| ||| || ||| || |||| |||
Sbjct 1057 TTGCCTACAT-CCATTGTCAATATGTCCACGGAAC-TCACCGT-TTTGAA-CCTT-AAAG 1111
Query 1133 CAATT-TCATCTCTGGAAGCATCCCTCATGACATTGGGAATCTCATAAGCCTACAATCAC 1191
|| |||| | ||||||||| |||||||| ||||| ||||||||| ||||||||||||
Sbjct 1112 GAAACCTCATTTATGGAAGCATTCCTCATGATATTGGAAATCTCATAGGCCTACAATCAC 1171
Query 1192 TT 1193
||
Sbjct 1172 TT 1173
> AT3G47580.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:17532648-17536059 FORWARD LENGTH=3324
Length=3324
Score = 741 bits (401), Expect = 0.0
Identities = 957/1217 (79%), Gaps = 72/1217 (6%)
Strand=Plus/Plus
Query 7 AAAGTTTGAGAAGCATGAAAGTGTTTAATTTACTTGCTTTGAGTACTC-TTATGTTACTT 65
||| ||||||||| |||||| | ||| ||||||| |||| ||| ||| || |||||||
Sbjct 26 AAACTTTGAGAAGGATGAAACTATTTCTTTTACTTTCTTTCAGTGCTCATT-TGTTACTG 84
Query 66 GAAGCATATCGTTTTACTGATGAAACTGATAGGCAAGCGTTGTTGGAGTTCAAGTCTCAA 125
| |||| || | ||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 85 GGAGCAGATGGGTTTACCGATGAAACTGATAGGCAAGCATTGTTGGAGTTCAAGTCTCAA 144
Query 126 GTTTCTGAAGGCAGAAGAGATGTGTTGTCCTCATGGAATAATTCATTCCCTCTTTGCCGC 185
||||||||||||| ||||||||| || |||||||||||||| ||||||||||| ||| |
Sbjct 145 GTTTCTGAAGGCAAAAGAGATGTCTTATCCTCATGGAATAACTCATTCCCTCTATGCAAC 204
Query 186 TGGAAAG-GGGTTAGATGTGGCCGCAAACACAAGAGAGTCACAC-TTATGGACCTCAACG 243
||||| | |||||| |||||| || |||||||||||||| || | || || ||||| |
Sbjct 205 TGGAA-GTGGGTTACATGTGGTCGTAAACACAAGAGAGTTACTCATT-TGAACCTCGGGG 262
Query 244 GATTGCAGTTAGGCGG-AGT-GATATCACCATCTATTGGTAATCTTTCCTTTCTCATATC 301
|||| ||||| ||||| | | | ||||||||||||| |||||| | || |||||||||||
Sbjct 263 GATTACAGTTGGGCGGGA-TAG-TATCACCATCTATCGGTAATGTATCGTTTCTCATATC 320
Query 302 ACTTAATCTCTCTGATAACTCTTTTGGTGGCACCATCCCTCGAGAGGTTGGAAACTTGTT 361
|||| |||| ||||||||| ||||||| || | ||||||||||||||| |||||||||||
Sbjct 321 ACTTGATCTGTCTGATAACGCTTTTGGGGGTATCATCCCTCGAGAGGTGGGAAACTTGTT 380
Query 362 CAGACTTGAACATTTGGATATGAGCTTT-AATTTCCTCAA-AGA-AGGGATTCCAATCAG 418
||||||||||| ||| ||||| || || |||| | || | || |||||||||| ||
Sbjct 381 TAGACTTGAACACTTGTATATG-GCCTTCAATT-C-TCTAGAGGGAGGGATTCCAGCCAC 437
Query 419 TCTATATAACTGCTCTAGATTGGCGGAGTTTTATTTATTTTCAAATCATCTTGGAGGAGG 478
||||| |||||||||||||||| | | || |||||| |||||||| |||| || |||
Sbjct 438 TCTATCTAACTGCTCTAGATTGTTGAACCTTGATTTATATTCAAATCCTCTTAGACAAGG 497
Query 479 TGTTCCTTCAGAAATAGGGTCATTGACGAAGCTCGTTGAATT-AGATCTTGGCCAAAACG 537
||||||||| ||| |||||||||||||||| |||||| | || ||||||||| | ||||
Sbjct 498 TGTTCCTTCTGAACTAGGGTCATTGACGAAACTCGTT-ATTTTAGATCTTGGTCGAAACA 556
Query 538 ACTTGAAAGGGAAGCTCCC-AGCATCTCTAGGAAACTTGACATCACTCA--TGGAAGTTA 594
|| ||||||| |||||||| || |||||||||||||||||| || | | | | ||
Sbjct 557 ACCTGAAAGGCAAGCTCCCTAG-ATCTCTAGGAAACTTGACCTCTTTAAAATCGC--TTG 613
Query 595 GCTTTACC-ACTAACAATATAGAAGGGGAAATTCC-GAATGATAT-AGGTAGATTGACTC 651
|||| || | ||||||||||||||| ||| |||| || ||| || || |||| ||| ||
Sbjct 614 GCTTCACAGA-TAACAATATAGAAGGAGAAGTTCCAGA-TGA-ATTAGCTAGACTGAGTC 670
Query 652 AAATAGTGGCG-CTTCAATTATCAGCGAACAAATTCTCAGGTGTTTTTCCTCCTTCCATC 710
|||| |||| | ||| |||||| ||||||||||| || ||||||||||| |||||
Sbjct 671 AAATGGTGG-GTCTTGGGTTATCAATGAACAAATTCTTTGGCGTTTTTCCTCCCGCCATC 729
Query 711 TACAATTTGTCCACACTTTTGTTTTTAAATA-TCTTTGGTTGTGGCTTTTCGGGTAGTTT 769
|||||||||||| ||||| | ||| | |||||||| ||||||| |||||||| |
Sbjct 730 TACAATTTGTCCGCACTTGAGGACTTAT-TCCTCTTTGGTAGTGGCTTCTCGGGTAGCCT 788
Query 770 AAGGCCTGATTTTGGTAATTTGCTACCAAACCTT-GA-ACATATATATATGGGAGGGAAT 827
|| |||||||||||||||| ||||||||||| || | | || | || |||||| |||
Sbjct 789 AAAGCCTGATTTTGGTAATCTGCTACCAAACATTCGTGAGTTA-A-ATCTGGGAGAAAAT 846
Query 828 TATTTCACAGG-AGCCATTCCAATAACACTTCCCATTATCTCGAA-TCTTCAAGTGTTGG 885
|| | | || ||||||||||| ||||||| ||| ||| || || ||| ||| ||| |
Sbjct 847 GATCT-AGTGGGAGCCATTCCAACAACACTTTCCAATATTTC-AACTCTACAAAAGTTTG 904
Query 886 GAATGGAGGACAACA--ATCTA-AG-AGGTAGTAT-TCCTCCAAGTTTTGGACAAGTACC 940
|||| | | |||| || | || ||||| ||| ||| || ||| ||| |||||||
Sbjct 905 GAATCAACAAAAACATGATG-ACAGGAGGTA-TATATCCG--AACTTT-GGAAAAGTACC 959
Query 941 AAACTTGCAAT-CTCTAAATTTTCGTGCTAA-CCAATTGGGTAGTCGCTCTTTTGGAGAT 998
| ||||||| | ||| || || ||| || || | || ||| | |||||||||||
Sbjct 960 GAGTTTGCAATAC-CTAGATCTTAGTGAGAATCCTCTAGGA-AGTTACACTTTTGGAGAT 1017
Query 999 CTTGATTTTCTTGGTGCTTTAACTAATTGCTCTCAACTACAAGTGGTA-GACGTAGGTGA 1057
||||| ||| ||| | |||| ||||||||| | || | ||| | || | || ||| |
Sbjct 1018 CTTGAATTTATTGATTCTTTGACTAATTGCACCCATTTGCAACTCTTAAGT-GTTGGTTA 1076
Query 1058 AAATTGGCTTGGGGGTGACTTGCCTA-ATTCCATTGCCAATCTGTCTAG-GAACCTCATG 1115
| | |||||||||||| |||||||| || ||||||||||| |||| | |||| ||||
Sbjct 1077 CACTAGGCTTGGGGGTGCCTTGCCTACAT-CCATTGCCAATATGTCCACAGAAC-TCATC 1134
Query 1116 TA-TTTAAGCCTTC-A--AA-CCAATTTCATCTCTGGAAGCATCCCTCATGACATTGGGA 1170
| ||||| |||| | || ||| ||| | | ||||||||| ||||| || |||||||
Sbjct 1135 -AGTTTAAACCTTATAGGAAACCACTTT--T-T-TGGAAGCATTCCTCAAGATATTGGGA 1189
Query 1171 ATCTCATAAGCCTACAA 1187
|||||||| ||||||||
Sbjct 1190 ATCTCATAGGCCTACAA 1206
Score = 673 bits (364), Expect = 0.0
Identities = 723/893 (81%), Gaps = 38/893 (4%)
Strand=Plus/Plus
Query 1210 TAGGAAACATCACTCGGTTAG-TATACCTCTATTTTTCCAACAATAGTTTTGATGGAACC 1268
|||| ||| | |||| |||| ||| || ||||| ||||||||||||||||| ||||
Sbjct 1328 TAGGCAACCTAACTCAATTAGAAATA-CTATATTTGTCCAACAATAGTTTTGAGGGAATT 1386
Query 1269 ATTCCTCCGAGTCTTGGAAAATGTAGTCAGC-TACTAGACTTACG-AGTTGGGTATAATA 1326
||||||||||||| || || |||||||| | | || || ||||| | |||||||||| |
Sbjct 1387 GTTCCTCCGAGTCTCGGGAAGTGTAGTCA-CATGCTTGATTTACGCA-TTGGGTATAACA 1444
Query 1327 AGTTGAATGGGACTATACCTCAA-GAAATTATGGTAATTCGATCGCTTACTACCCTCAGC 1385
||||||||||||||||||| || ||||||||| ||| | | | ||| || ||| |||
Sbjct 1445 AGTTGAATGGGACTATACC-GAAGGAAATTATGCAAATCCCAACCCTTGTTAACCTAAGC 1503
Query 1386 ATGTCAA-ATAATTATTT-ATCTGGCTCTCTAGCAAAAGATGTTGGACGAT-TACAGAAT 1442
||| || ||| | ||| | | ||||||||| |||| ||| ||||| | | |||| |||
Sbjct 1504 ATG-GAAGGTAACTCTTTGAGC-GGCTCTCTACCAAATGATATTGGAAG-TCTACAAAAT 1560
Query 1443 CTCGTTCGACTATCTGTTTCG-GCTAATAAATTATCAGGGGAGCTCCCACAGACTTTGGG 1501
|| || |||||| || | | ||||| || ||||| | |||||||| || |||||
Sbjct 1561 CTTGTAAAACTATCACTTGAGAAC-AATAAGTTTTCAGGACATCTCCCACAAACCTTGGG 1619
Query 1502 AAACTGTTTCTCGATGGAATTTA-TGTATCTACAAGGAAATTCTTTTGATGGAGCCATTC 1560
||| ||| || |||||||| | | | ||||||||||||||||||||||||||| ||||
Sbjct 1620 AAATTGTCTCGCGATGGAA-CAACTTTTTCTACAAGGAAATTCTTTTGATGGAGCAATTC 1678
Query 1561 CAGATATAAGAAAGTTGGTGGGTGTTA-AAGAAGTTGATTTATCGAATAATAATCTGTCC 1619
|| |||||||| |||| ||||||| | ||| ||||||||| || || ||| |||| ||
Sbjct 1679 CAAATATAAGAGGGTTGATGGGTGTAAGAAG-AGTTGATTTGTCAAACAATGATCTATCG 1737
Query 1620 GGAAGTATACCTGTATATATTGCAAACTTCTCCTCGTTGCAATATCTTAATCTATCCATT 1679
||||||||||||| |||| |||||||||||||| |||| ||||||| |||||||| |||
Sbjct 1738 GGAAGTATACCTGAATATTTTGCAAACTTCTCCAAGTTGGAATATCTCAATCTATCTATT 1797
Query 1680 AACAATTTTGA-GGGAATGGTGCC-AACAGAAGGAAAATTTCAGAACTCTACTATAG-TT 1736
||||||||| | ||||| |||||| || ||||||| |||||||||||||| |||| ||
Sbjct 1798 AACAATTTT-ACGGGAAAGGTGCCTTCCA-AAGGAAATTTTCAGAACTCTACAATAGTTT 1855
Query 1737 TTGCTATTTGGAAACAAAAATCTATGTGGAGGTATCAAGGAACTGAAACTAAAGCCATGC 1796
||| |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct 1856 TTG-TATTTGGAAACAAAAACCTATGTGGAGGCATCAAGGATCTGAAACTAAAGCCATGC 1914
Query 1797 ATTGCGGTAGCACCACTAATGGAGACAAAGCACCT-ATCTCTTTTAAAGAAAGTTGTGAT 1855
| || || ||||| | ||||||||||||| | |||| |||||||||||||| ||
Sbjct 1915 CTCGCCCAAGAACCACCAGTGGAGACAAAGCA-TTCCTCTCATTTAAAGAAAGTTGCAAT 1973
Query 1856 CGGGGTCAGCGTAGGCATAGCTTTCCTTTTGCTATTGTTCATAG-TT---T--CTCTACG 1909
|| ||| ||||||||||||| || ||||| ||| |||||| || | ||| |
Sbjct 1974 TTTAGTAAGCATAGGCATAGCTTTGCTATTGCTGTTGGTCATAGCTTCGATGGTTCTGTG 2033
Query 1910 TTGGTTCATAAAAAGAAAGAAGAACCAGAAGACCAATAATTC-AGCTGCGTCTACA-TTG 1967
|||||||| |||||||| |||||||||| |||| ||||| | | | | |||| | |||
Sbjct 2034 TTGGTTCAGAAAAAGAAGGAAGAACCAGCAGACAAATAA-CCTGGTTCCTTCTA-AGTTG 2091
Query 1968 GAGAGTTTCCATGAAAAGATAAGTTATGGAGTTCTACGAAATGCGACAGATGGCTTCTCT 2027
|||| ||||||||| |||||||| ||||||| |||||||||||||||| |||||||||||
Sbjct 2092 GAGATTTTCCATGAGAAGATAAGCTATGGAGATCTACGAAATGCGACAAATGGCTTCTCT 2151
Query 2028 TCAAGCAATATGGTTGGGTCAGGCAGTTTTGGTACTGTGTTTAAGGCATTGCT 2080
||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 2152 TCAAGCAATATGGTTGGGTCAGGTAGTTTTGGTACTGTGTTCAAGGCATTGCT 2204
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 107077762485
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5