BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg937502
Length=2829
Score E
Sequences producing significant alignments: (Bits) Value
AT3G47570.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1026 0.0
AT3G47580.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1026 0.0
AT3G47090.1 | Symbols: | Leucine-rich repeat protein kinase fa... 654 0.0
> AT3G47570.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:17527507-17530929 FORWARD LENGTH=3318
Length=3318
Score = 1026 bits (555), Expect = 0.0
Identities = 788/901 (87%), Gaps = 14/901 (2%)
Strand=Plus/Plus
Query 1931 GCATTGCTCCCTG-TGGAGAATAAGGTTGTTGCAGTCAAAGTTCTAAACATGGAGAGACG 1989
|||||||| |||| |||||| |||||||||||||| |||||| |||||||| |||||||
Sbjct 2259 GCATTGCT-CCTGACGGAGAAAAAGGTTGTTGCAGTGAAAGTTTTAAACATGCAGAGACG 2317
Query 1990 TGGAGCAAAGAAGAGCTTTATGGCAGAATGCGAATCCTTGAAAGACATAAGGCATCGTAA 2049
|||||| | ||||||||||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct 2318 TGGAGCGATGAAGAGCTTTATGGCAGAATGTGAATCCTTGAAGGACATAAGACATCGTAA 2377
Query 2050 TCTTGTAAAATTGTTGACAGCTTGTTCGAGTATTGATTTCCAAGGAAACGAATTTAGAGC 2109
|||||| ||| | |||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 2378 TCTTGTGAAACTATTGACAGCTTGTTCGAGTATTGATTTTCAAGGAAATGAATTTAGAGC 2437
Query 2110 TCTCATCTATGATTTCATGCCGAATGGAAGCTTGGATATGTGGCTGCATCCAGAGGAAAT 2169
|||||||||||| |||||||| |||||||| || |||||||||||||| ||||||||| |
Sbjct 2438 TCTCATCTATGAGTTCATGCCTAATGGAAGTTTAGATATGTGGCTGCACCCAGAGGAAGT 2497
Query 2170 AGAAGAGATTCATAGGCCCTCGAGAACCTTGACACTTCTTGAAAGGCTGAACATTGCCGT 2229
|||||||||||||||||||| ||||| ||||| |||||||||||||| ||||||||| |
Sbjct 2498 GGAAGAGATTCATAGGCCCTCAAGAACTTTGACCCTTCTTGAAAGGCTTAACATTGCCAT 2557
Query 2230 AGATGTGGCTTTTGTTTTGGACTATCTTCATGTCCACTGCCATGAACCTATAGCCCATTG 2289
||| ||||||| ||||||||| ||||| ||||| || || |||||||||||||| |||||
Sbjct 2558 AGACGTGGCTTCTGTTTTGGATTATCTCCATGTTCATTGTCATGAACCTATAGCTCATTG 2617
Query 2290 TGATCTAAAGCCAAGCAACGTCCTTCTAGACGATGACCTGACTGCCCATGTTAGCGACTT 2349
||||| ||||||||||||||||||||||||||||| || || ||||||||||| |||||
Sbjct 2618 CGATCTTAAGCCAAGCAACGTCCTTCTAGACGATGATCTAACCGCCCATGTTAGTGACTT 2677
Query 2350 TGGTCTGGCTCGGCTCCTCCTCAAATTTGACCGAG-AGTCCTTCCTCAATCAACTAAGCT 2408
|||||| ||||| || ||||||||||| ||| ||| |||||||| |||| ||||||||||
Sbjct 2678 TGGTCTAGCTCGTCTTCTCCTCAAATTCGAC-GAGGAGTCCTTCTTCAACCAACTAAGCT 2736
Query 2409 CAGCCGGAGTCAGAGGAACCATCGGCTATGCCGCTCCAGAATATGGAATGGGAGGGCAGC 2468
||||||| || ||||||||||||||||||||||| ||||| |||||| ||||||| ||||
Sbjct 2737 CAGCCGGTGTTAGAGGAACCATCGGCTATGCCGCACCAGAGTATGGAGTGGGAGGACAGC 2796
Query 2469 CTTCAATACATGGTGATGTGTATAGCTTTGGGGTTTTCCTTTTGGAAATGTTCACTGGAA 2528
| || ||| |||||||||| ||||| |||||| || ||||||| ||||||||||||||||
Sbjct 2797 CATCTATAAATGGTGATGTATATAGTTTTGGGATTCTCCTTTTAGAAATGTTCACTGGAA 2856
Query 2529 AGCGACCAACCAATGAGTTATTTGGGGGAAACTTTACACT-ACACAGCTACACCAAATCA 2587
| |||||||||||||| ||||||| ||||||||||| || | |||||||||| || ||
Sbjct 2857 AAAGACCAACCAATGAGCTATTTGGAGGAAACTTTACCCTGA-ACAGCTACACTAAGTCG 2915
Query 2588 GCTTTGCCAGAAAGAGTTTTGGATGCTGCCGATGAATCAATTCTTCACATCGGTCTTAGA 2647
|| ||||| |||||| | ||||| || || ||||||||||||||||| ||||| |||
Sbjct 2916 GCATTGCCGGAAAGAATATTGGACATTGTAGACGAATCAATTCTTCACATTGGTCTCAGA 2975
Query 2648 GTCGGTTTTCCAATTGTTGTGTGCTTGA-AATTGGTTTTTGAGGTTGGACTTAGGTGCAG 2706
|||||||| || |||||| |||||||| ||| |||||||||||| || |||||||| |
Sbjct 2976 GTCGGTTTCCCTGTTGTTGAGTGCTTGACAAT-GGTTTTTGAGGTGGGCCTTAGGTGTTG 3034
Query 2707 TGAAGAATCTCCTACAAACCGGTTGGCAATGAGTGA-AGTCG-CAAAGGAGTTGATCTCA 2764
|||||||||||| | ||||||||||||| |||| | ||||| ||| |||||||||||||
Sbjct 3035 TGAAGAATCTCCGATGAACCGGTTGGCAACGAGT-ATAGTCGTCAA-GGAGTTGATCTCA 3092
Query 2765 ATCAAAGAGAGGTTCTTTAAAGCCAGAAGAACAACCCGACGTTGAAGTGTTTATGGTTTT 2824
|||| ||||||||||||||||||||| ||||| || | ||||||||||||| ||||||
Sbjct 3093 ATCAGAGAGAGGTTCTTTAAAGCCAGTAGAACGACTTGGCGTTGAAGTGTTT--GGTTTT 3150
Query 2825 G 2825
|
Sbjct 3151 G 3151
Score = 588 bits (318), Expect = 1e-166
Identities = 706/884 (80%), Gaps = 63/884 (7%)
Strand=Plus/Plus
Query 1082 TCAGGAGATATACCATCTTTTATAGGCAACCTCACT-TGGTTAGAGTCACTCT-ACTTGT 1139
||||||| ||||||| |||||||||||||| | ||| | |||||| |||| | | ||||
Sbjct 1368 TCAGGAGGTATACCAGCTTTTATAGGCAACATGACTAT-GTTAGAAACACT-TGATTTGT 1425
Query 1140 ACGACAAT-CTTTTCGTAGG-ATTCATTCCTCCGAGCCTCGGTAATTGTAGTCACCTGCT 1197
| ||||| |||| | ||| ||| ||||| | || || || || ||||||||||| ||
Sbjct 1426 CCAACAATGGTTTT-GAAGGTATT-GTTCCTACAAGTCTTGGCAACTGTAGTCACCTACT 1483
Query 1198 GGAATTGTGGATTGGGGATAATAAGTTGAATGGGACTATACCTCGGGAAATTATGCAAAT 1257
||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 1484 AGAATTGTGGATTGGGGATAATAAGTTGAATGGGACTATACCTCTGGAAATTATGAAAAT 1543
Query 1258 TTCACCC-CTTCTTAC-CCTA-AGCATCCCACGTAATTTCTT-GAAT-GGCTCTCTACCT 1312
| || | |||||| | |||| | ||| || | |||| ||| || | |||||||| ||
Sbjct 1544 T-CAGCAGCTTCTT-CGCCTAGA-CATGTCAGGAAATT-CTTTGA-TCGGCTCTCTCCC- 1597
Query 1313 GAAG-ATGTTGG-GCGACTAGAAAATCTTGTTACACTATCACTTGAAAATAATAAATTAT 1370
| || || | || ||| ||| ||||||||| |||||||||||||| ||||||||||||
Sbjct 1598 GCAGGATATCGGAGCG-CTACAAAATCTTGGTACACTATCACTTGGGGATAATAAATTAT 1656
Query 1371 CAGG-ACAACTTCCACAGACTTTGGGGACCTGTCTCT-CGATGGGAGAACTCTATCTAC- 1427
|||| | |||||||||| |||||||| | |||||| | | |||| | || ||| | |
Sbjct 1657 CAGGGA-AACTTCCACAAACTTTGGGAAACTGTCT-TACAATGG-A-AAGTCTTTTTTTG 1712
Query 1428 -AAGGAAATTTGTTTGATGGAGCCATTCCAGATATAAGAGGCTTGGTGGATATTAAAGAA 1486
|||||||||||||| |||||| ||||||||| ||| ||| ||||||| | ||||||||
Sbjct 1713 GAAGGAAATTTGTTTTATGGAGATATTCCAGATTTAAAAGGGTTGGTGGGTGTTAAAGAA 1772
Query 1487 ATTGATTTCTCGAACAATAATCTCTTTGGA-GTTATACCTGGATATCTT-GCAAATTTTT 1544
||||||| || |||||| |||||| |||| || ||||||| ||| ||| |||| ||||
Sbjct 1773 GTTGATTTGTCTAACAATGATCTCTCTGGAAGT-ATACCTGAATA-CTTTGCAAGCTTTT 1830
Query 1545 CCAAGTTGCAGTATCTCAATCTATCCATTAACAAT-TTCGAGGGAAGAG-TGCCAACAGA 1602
|||||||| |||||||||||||||| |||||||| || ||||||| || ||||| ||
Sbjct 1831 CCAAGTTGGAGTATCTCAATCTATCTTTTAACAATCTT-GAGGGAA-AGGTGCCAGT-GA 1887
Query 1603 AGGGAA-ATTTCAGAATGC-ATCT-CTAGTTTC-AGTATTTGGAAACAAAGATCTATGTG 1658
| |||| |||| ||||||| | || | |||||| | || |||| ||||| ||| ||||||
Sbjct 1888 AAGGAATATTTGAGAATGCTA-CTAC-AGTTTCCA-TAGTTGGGAACAATGATTTATGTG 1944
Query 1659 GCGGCATCA-GGGAGTTGCAACTAAAGCCATGC-TCAAGGCAAGAACCACCAATGG-GAA 1715
| || || | ||| ||| ||||||||||||||| | | |||| |||| | ||| |||
Sbjct 1945 GAGGTATTATGGG-GTTTCAACTAAAGCCATGCCTTTCG-CAAGCACCATCTGTGGTGAA 2002
Query 1716 GAAAGCATTCCTCTC-TTTCAAGGAAAGCTGTGATATGG-GTCAGTGTAAGCATAGCTTT 1773
||| |||||| |||| ||| ||| |||| |||||| ||| || || ||| ||||| ||||
Sbjct 2003 GAA-GCATTCATCTCGTTTAAAG-AAAGTTGTGAT-TGGAGTTAGCGTAGGCATAACTTT 2059
Query 1774 GCTTTTGCTGGTGTTCATAGCTTTAGTTTCTCT-ACGCTGGTTGAGAAAGAGAAAGA-GA 1831
||||||| || ||||||| |||| |||| || | | ||||||||||||||||||| ||
Sbjct 2060 GCTTTTGTTGTTGTTCATGGCTTCAGTTACTTTGATT-TGGTTGAGAAAGAGAAAGAAGA 2118
Query 1832 AACCTCCAGACCAATAATCCAACTCCTTCCACTATGGGGGTCTTTCATGA-AAGATTAGT 1890
| | | |||||||||||||||||||| ||| ||| ||||| ||||| ||||| |||
Sbjct 2119 A-CAAAGAAACCAATAATCCAACTCCTTCTACTTTGGAAGTCTTGCATGAGAAGATAAGT 2177
Query 1891 TATGGAGATCTTCAAAATGCAACAGA-TGGTTTCTCTTCAAGCA 1933
||||||||||||| ||||| || || ||| |||||||| ||||
Sbjct 2178 TATGGAGATCTTCGTAATGCGAC-GAATGGCTTCTCTTCGAGCA 2220
> AT3G47580.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:17532648-17536059 FORWARD LENGTH=3324
Length=3324
Score = 1026 bits (555), Expect = 0.0
Identities = 793/908 (87%), Gaps = 15/908 (2%)
Strand=Plus/Plus
Query 1926 TTCAA-GCATTGCTCCCTG-TGGAGAATAAGGTTGTTGCAGTCAAAGTTCTAAACATGGA 1983
||||| ||||||||||| | ||||| ||| |||||||||| ||||||||||||||| |
Sbjct 2191 TTCAAGGCATTGCTCCC-GACGGAGAGCAAGATTGTTGCAGTGAAAGTTCTAAACATGCA 2249
Query 1984 GAGACGTGGAGCAAAGAAGAGCTTTATGGCAGAATGCGAATCCTTGAAAGACATAAGGCA 2043
|||||||||||| | ||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct 2250 GAGACGTGGAGCTATGAAGAGCTTTATGGCAGAATGTGAATCCTTGAAAGACACAAGGCA 2309
Query 2044 TCGTAATCTTGTAAAATTGTTGACAGCTTGTTCGAGTATTGATTTCCAAGGAAACGAATT 2103
|||||||||||| ||||| |||||||||| | |||| |||||||||||||||||||||
Sbjct 2310 TCGTAATCTTGTGAAATTACTGACAGCTTGCGCTAGTACTGATTTCCAAGGAAACGAATT 2369
Query 2104 TAGAGCTCTCATCTATGATTTCATGCCGAATGGAAGCTTGGATATGTGGCTGCATCCAGA 2163
||||| || |||||||| | | |||||||||||||| |||||||||||||||| |||||
Sbjct 2370 CAGAGCGCTTATCTATGAGTACTTGCCGAATGGAAGCGTGGATATGTGGCTGCACCCAGA 2429
Query 2164 GGAAATAGAAGAGATTCATAGGCCCTCGA-GAACCTTGACACTTCTTGAAAGGCTGAACA 2222
|||| | |||||||| | ||||||| | | ||||||||||||||||||||||||| || |
Sbjct 2430 GGAAGTCGAAGAGATACGTAGGCCC-CCACGAACCTTGACACTTCTTGAAAGGCTTAATA 2488
Query 2223 TTGCCGTAGATGTGGCTTTTGTTTTGGACTATCTTCATGTCCACTGCCATGAACCTATAG 2282
||| | |||| ||||||| ||||||||||||||||||||| ||||| ||||| |||||||
Sbjct 2489 TTGTCATAGACGTGGCTTCTGTTTTGGACTATCTTCATGTTCACTGTCATGAGCCTATAG 2548
Query 2283 CCCATTGTGATCTAAAGCCAAGCAACGTCCTTCTAGACGATGACCTGACTGCCCATGTTA 2342
| ||||| ||||| ||||||||||||||||||||||| ||||| |||| ||||||||||
Sbjct 2549 CTCATTGCGATCTCAAGCCAAGCAACGTCCTTCTAGAAGATGATTTGACCGCCCATGTTA 2608
Query 2343 GCGACTTTGGTCTGGCTCGGCTCCTCCTCAAATTTGACCGA-GAGTCCTTCCTCAATCAA 2401
| || ||||||||||||||||| || |||||||| || | | ||||| ||||| || |||
Sbjct 2609 GTGATTTTGGTCTGGCTCGGCTTCTACTCAAATTCGA-CAAGGAGTCATTCCTTAACCAA 2667
Query 2402 CTAAGCTCAGCCGGAGTCAGAGGAACCATCGGCTATGCCGCTCCAGAATATGGAATGGGA 2461
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2668 CTAAGCTCAGCCGGAGTTAGAGGAACCATCGGCTATGCCGCACCAGAATATGGAATGGGA 2727
Query 2462 GGGCAGCCTTCAATACATGGTGATGTGTATAGCTTTGGGGTTTTCCTTTTGGAAATGTTC 2521
|| || || ||||||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct 2728 GGACAACCATCAATACATGGTGATGTGTATAGCTTTGGGGTTCTCCTTTTAGAAATGTTC 2787
Query 2522 ACTGG-AAAGCGACCAACCAATGAGTTATTTGGGGGAAACTTTA-CACTACACAGCTACA 2579
|| || ||| |||||||| ||||||||||||||||||| |||| ||||||| |||||||
Sbjct 2788 ACCGGGAAA-CGACCAACTGATGAGTTATTTGGGGGAAA-TTTAACACTACATAGCTACA 2845
Query 2580 CCAAATCAGCTTTGCCAGAAAGAGTTTTGGATGCTGCCGATGAATCAATTCTTCACATCG 2639
|||| | ||| |||||||||| ||| || || ||| || || | ||||||||||| |
Sbjct 2846 CCAAGTTAGCGTTGCCAGAAAAAGTATTCGAAATTGCAGACAAAGCGATTCTTCACATTG 2905
Query 2640 GTCTTAGAGTCGGTTTTCCA-ATTGTTGTGTGCTTGAAATTGGTTTTTGAGGTTGGACTT 2698
|||||||||| ||||| || | || || |||||||| | ||||||| ||||| ||||||
Sbjct 2906 GTCTTAGAGTTGGTTT-CCGTACTGCTGAGTGCTTGACACTGGTTTTGGAGGTGGGACTT 2964
Query 2699 AGGTGCAGTGAAGAATCTCCTACAAACCGGTTGGCAATGAGTGAAGTCGCAAAGGAGTTG 2758
|||||| ||||||||| |||||| ||||||||||||| ||||||||||||||| ||||||
Sbjct 2965 AGGTGCTGTGAAGAATATCCTACGAACCGGTTGGCAACGAGTGAAGTCGCAAAAGAGTTG 3024
Query 2759 ATCTCAATCAAAGAGAGGTTCTTTAAAGCCAGAAGAACAACCC-GACGTTGAAGTGTTTA 2817
|||||||||| ||| |||||||||||| ||||||||||| || ||||||||||| ||||
Sbjct 3025 ATCTCAATCAGAGAAAGGTTCTTTAAAACCAGAAGAACA-CCTAGACGTTGAAGTTTTTA 3083
Query 2818 TGGTTTTG 2825
||||||||
Sbjct 3084 TGGTTTTG 3091
> AT3G47090.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:17341512-17344645 REVERSE LENGTH=3030
Length=3030
Score = 654 bits (354), Expect = 0.0
Identities = 822/1040 (79%), Gaps = 64/1040 (6%)
Strand=Plus/Plus
Query 23 ATGAGAGTGTTTCTTTTACTTTCTTTGAATGCTCTCATGTTACTTGAAGCATATGGTTTT 82
|||||| | |||||||||||| |||| |||||||||||| ||| |||||||||||||||
Sbjct 1 ATGAGACTATTTCTTTTACTTGCTTTCAATGCTCTCATGCAACTCGAAGCATATGGTTTT 60
Query 83 ACCGATGAATCTGATAGGCAAGCGTTGTTCGAGTTCAAATCTCAAGTTTCTCTAGGCAAA 142
||||||||| |||||||||||||||||| ||| |||| |||||||||||| | |||||
Sbjct 61 ACCGATGAAAGTGATAGGCAAGCGTTGTTGGAGATCAAGTCTCAAGTTTCTGAAAGCAAA 120
Query 143 AGAGCTGTTTTGTCCTCATGGGATAACACCGTCCATGTGTGCAACTGG-ACTGGGGTTAC 201
|| | || |||||| | ||| ||||| | ||| | | |||| |||| | | ||||||
Sbjct 121 AGGGATGCCTTGTCCGCGTGGAATAACTCATTCCCTCTCTGCAGCTGGAAGT-GGGTTAG 179
Query 202 ATGTGGCCGCAAACACAAGAGAGTTACTCGTTTGGAGCTTGGAGGATTGCAATTAGGCGG 261
|||||||||||||||||||||||||||||||||||| || ||||||||||| || || ||
Sbjct 180 ATGTGGCCGCAAACACAAGAGAGTTACTCGTTTGGACCTCGGAGGATTGCAGTTGGGAGG 239
Query 262 AATGATATCACCATCTATTGGTAATCTTTCCTTTCTCATATGGCTTAATCTCTCTGGTAA 321
| |||||||||||||||||||||||||||| |||||||||| ||| | |||||| |||
Sbjct 240 AGTGATATCACCATCTATTGGTAATCTTTCGTTTCTCATATATCTTGACCTCTCTAATAA 299
Query 322 CTCTTTTGTTGGTACCATCCCTCACGAGGTGGGAAACTTGTTTAGGCTTGAACACTTGGA 381
|||||||| ||| ||||||||||| ||| |||||||||||||||| ||| || | ||||
Sbjct 300 CTCTTTTGGTGGAACCATCCCTCAAGAGATGGGAAACTTGTTTAGACTTAAATATTTGGC 359
Query 382 TATGAACTTTAATTATATC-AAGGGAGATATTCCAGCCAGTTTGGCTAATTGCTCTAGAT 440
| || |||||||||| | |||| ||| ||||||||||||||| | || ||||||||||
Sbjct 360 TGTGGGCTTTAATTATCTGGAAGG-AGAGATTCCAGCCAGTTTGTCCAACTGCTCTAGAT 418
Query 441 TGTTGGAGCTTCAGATTAATT--CAAATCA-TCTTGGAGGATG-TGTTCCTTCAGAACTA 496
||||| | ||| |||| ||| |||| || |||||||| | | ||||||||||||||||
Sbjct 419 TGTTGTACCTT--GATTTATTTTCAAA-CAATCTTGGAG-ACGGTGTTCCTTCAGAACTA 474
Query 497 GGGTCATTGACGAA-GCTTGTT-ACTTTAGATCTTTATGGAAACAACCTAAAAGGAAAGC 554
|||||||||| ||| |||| || | | || ||||| | |||| |||| |||||||||
Sbjct 475 GGGTCATTGA-GAAAGCTTCTTTA-TCTATATCTTGGTCTAAACGACCTCAAAGGAAAGT 532
Query 555 TCCCTG-ATTTTCTAGGTAACTTAACATCCCTTAA-AGAAGTTGGATTTGG-AGGTAA-C 610
|||| | |||| || | ||||| || || || || || | | | |||| | ||| |
Sbjct 533 TCCCCGTATTTA-TACGAAACTTGACGTCTCT-AATAGT-GCTCAACTTGGGATATAATC 589
Query 611 AATATAGAAGGAAGAA-TTCCGGATAATATAGTTA-GATTGACTCGAATGGTGTATCTTG 668
| | | |||||| ||| |||| ||| |||||| || | | || || |||||||| ||||
Sbjct 590 A-TCTGGAAGGA-GAAATTCCAGATGATATAGCTATGCT-GAGTCAAATGGTGTCTCTT- 645
Query 669 AC-TTATCACGGAACAGTTTCT-TAGGTGTTTTTCCTCCCCCTATT-TACAACTTGTCCT 725
|| ||| || ||||| |||| | || ||||||||||| || || |||||||||||||
Sbjct 646 ACATTAACAATGAACAACTTCTCT-GGCGTTTTTCCTCCTGCT-TTCTACAACTTGTCCT 703
Query 726 CACTTTATGT-TTTAAACATC-TTCGGTAATAGTTTCTCGGGTAGTCT--AAGGGCTGAT 781
||||| | | |||| || || || |||||| |||||||||||| || ||| |||||
Sbjct 704 CACTTGA-GAATTTATACCTCCTT-GGTAATGGTTTCTCGGGTAA-CTTGAAGC-CTGAT 759
Query 782 TTTGGTAATTTGCTACCCAACCTTCAA-AGGCTT-T-TTATAGGAAGGAATCATTT-C-A 836
||||||||| ||||||| ||| |||| || || | || | | | |||| |||| | |
Sbjct 760 TTTGGTAATCTGCTACCAAACATTCATGAG--TTATCTT-T-GCATGGAA--ATTTTCTA 813
Query 837 -CAGGAGCCATTCCAACTACACTTCCCAATATCTCAAATCTTCAAATGTTGGGAATGGAG 895
|||||||||| ||||| |||||| ||||||| |||| ||| ||||||| ||||| | |
Sbjct 814 ACAGGAGCCATCCCAACAACACTTGCCAATATTTCAACTCTGGAAATGTTTGGAATTG-G 872
Query 896 TATAA-CAATCTGACAGGAGGTAT-TCCTTCGAGCTTTGGAAAATTATG-GAAGTTAAAA 952
|| || || |||||||| |||| || | | | |||||||||| || | ||| || |
Sbjct 873 TAAAAACAGGATGACAGGAAGTATCTC-TCCCAACTTTGGAAAACTA-GAGAATTTGCAT 930
Query 953 GAATTATCACTT-CATAGCAATTTTTTGGGTAGTGGCTCTTTTGGAGATCTTG-AGTTTC 1010
| || |||| | || ||||| |||||| ||| ||||||||||||||||| | ||||
Sbjct 931 TACCTAGAACTTGC-TAACAATTCTTTGGGAAGTTACTCTTTTGGAGATCTTGCA-TTTC 988
Query 1011 TTGGTGCTTTGACTAACTGC 1030
||| |||||||||||| |||
Sbjct 989 TTGATGCTTTGACTAATTGC 1008
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 140567774286
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5