BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg937505
Length=1043
Score E
Sequences producing significant alignments: (Bits) Value
AT3G47600.1 | Symbols: MYB94, ATMYBCP70, ATMYB94 | myb domain p... 1718 0.0
AT5G62470.2 | Symbols: MYB96 | myb domain protein 96 | chr5:250... 556 1e-157
AT1G08810.1 | Symbols: MYB60, AtMYB60 | myb domain protein 60 |... 292 3e-78
AT3G28910.1 | Symbols: ATMYB30, MYB30 | myb domain protein 30 |... 265 8e-70
AT5G15310.1 | Symbols: ATMYB16, ATMIXTA, MYB16 | myb domain pro... 111 1e-23
> AT3G47600.1 | Symbols: MYB94, ATMYBCP70, ATMYB94 | myb domain
protein 94 | chr3:17539338-17541230 REVERSE LENGTH=1486
Length=1486
Score = 1718 bits (930), Expect = 0.0
Identities = 1009/1047 (96%), Gaps = 5/1047 (0%)
Strand=Plus/Plus
Query 1 TATATACATAGAGAAGATTGAGATGGGAAGACCACCATGCTGTGACAAGATTGGAGTGAA 60
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 174 TATTTACATAGAGAAGATAGAGATGGGAAGACCACCATGCTGTGACAAGATTGGAGTGAA 233
Query 61 GAAAGGGCCATGGACACCAGAGGAAGATATCATCTTGGTTTCTTACATCCAAGAACATGG 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 234 GAAAGGACCATGGACACCAGAGGAAGATATCATCTTGGTTTCTTACATCCAAGAACATGG 293
Query 121 TCCTGGAAACTGGAGATCTGTGCCTACTCATACAGGTTTGAGGAGATGTAGCAAAAGTTG 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 294 TCCTGGAAACTGGAGATCTGTGCCTACTCACACAGGTTTGAGGAGATGTAGCAAAAGCTG 353
Query 181 TAGATTGAGGTGGACTAATTATCTTCGACCTGGGATTAAGCGTGGAAATTTCACCGAGCA 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 354 TAGATTGAGGTGGACTAATTATCTTCGACCTGGGATCAAGCGTGGAAATTTCACCGAGCA 413
Query 241 TGAAGAGAAGATGATTCTCCATCTTCAAGCTCTTTTGGGCAACAGGTGGGCAGCTATAGC 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 414 TGAAGAGAAGATGATTCTCCATCTTCAAGCTCTTTTGGGAAACAGGTGGGCAGCTATAGC 473
Query 301 ATCATACCTTCCAGAAAGGACAGACAATGATATAAAGAACTATTGGAACACTCATTTGAA 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 474 ATCATATCTTCCAGAAAGGACAGACAATGATATAAAGAACTATTGGAACACTCATTTGAA 533
Query 361 GAAAAAGCTCAAGAAGATGAATGATTCTTGTGATAGTACTATCAACAATGGCCTTGATGA 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 534 GAAAAAGCTCAAGAAGATGAATGATTCTTGTGATAGTACTATCAACAATGGCCTTGATAA 593
Query 421 TAAAGACTTCTCT-TCATCAAACAAAAACACTACTTCACATCAAAGCAGCAACCCCAGCA 479
|||||||||||| | |||||||||||||||||| |||||||||||||||||| |||| |
Sbjct 594 TAAAGACTTCTCCAT-ATCAAACAAAAACACTACCTCACATCAAAGCAGCAACTCCAGTA 652
Query 480 AAGGTCAATGGGAGAGAAGGCTTCAGACAGATATCAACATGGCTAAACAAGCTCTTTGTG 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 653 AAGGTCAATGGGAGAGAAGGCTTCAGACAGATATCAACATGGCTAAACAAGCTCTTTGTG 712
Query 540 ATGCCTTGTCTCTTGACAAACCACAAAACCCATCTAATTTCTCTATTACCGATCTTGGTT 599
||||||||||| |||||||||||||||||||| ||||||| |||||| ||||||||||||
Sbjct 713 ATGCCTTGTCTATTGACAAACCACAAAACCCAACTAATTTTTCTATTCCCGATCTTGGTT 772
Query 600 ATGGTCCATCATCTTCTTCTTCCTCTaccaccaccaccaccaccac-A--AGAAACACTA 656
||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||
Sbjct 773 ATGGTCCATCATCTTCTTCGTCCTCTACCACCACCACCACCACCACCACGAGAAACACTA 832
Query 657 ATCCATACCCATCTGGGGTCTATGCTTCAAGCGCAGAGAACATCGCTCGTTTGCTTCAGA 716
||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||
Sbjct 833 ATCCATACCCATCTGGGGTCTATGCTTCAAGTGCTGAGAACATTGCTCGTTTGCTTCAGA 892
Query 717 ATTTTATGAAAGACACACCAAAGACCTCGGTGCCCTCGCCGGTTGCAGCCACCGGGATGG 776
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 893 ATTTTATGAAAGACACACCAAAGACCTCGGTGCCCTTGCCGGTTGCAGCCACCGAGATGG 952
Query 777 CTATCACCACGGCGGCTTCGAGCCCTAGCACAACCGAAGGAGACGGAGAAGGGATTGACC 836
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 953 CTATCACCACGGCAGCTTCGAGCCCTAGCACAACCGAAGGAGACGGAGAAGGGATTGACC 1012
Query 837 ATTCTTTATTCAGCTTCAACTCCATGGATGAAGCTGAAAAGAAGCCAAAACTAATAGACA 896
||||||| ||||||||||||||||| |||||||||||| ||||||| ||||||||||||
Sbjct 1013 ATTCTTTGTTCAGCTTCAACTCCATAGATGAAGCTGAAGAGAAGCCTAAACTAATAGACC 1072
Query 897 ATGACATTAATGGTCTAATTACACAAGGCTCTCTTTCTTTGTTCGAGAAATGGCTCTTTG 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1073 ATGACATTAATGGTCTAATTACACAAGGCTCTCTTTCTTTGTTCGAGAAATGGCTCTTTG 1132
Query 957 ATGAGCAAAGCCATGATATGATCATCAATAACATGTCACTAGAGGGTCAAGAAGTGTTGT 1016
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1133 ATGAGCAAAGCCACGATATGATCATCAATAACATGTCACTAGAGGGTCAGGAAGTGTTGT 1192
Query 1017 TCTAGAAAGCAAAAAAGTTTGACGATT 1043
||||||||||| ||||||||||||||
Sbjct 1193 TCTAGAAAGCATTAAAGTTTGACGATT 1219
> AT5G62470.2 | Symbols: MYB96 | myb domain protein 96 | chr5:25078991-25081101
REVERSE LENGTH=1745
Length=1745
Score = 556 bits (301), Expect = 1e-157
Identities = 466/542 (86%), Gaps = 25/542 (5%)
Strand=Plus/Plus
Query 23 ATGGGAAGACCACCATGCTGTGACAAGATTGGAGTGAAGAAAGGGCCATGGACACCAGAG 82
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 244 ATGGGAAGACCACCTTGCTGTGAAAAGATTGGAGTGAAGAAAGGGCCATGGACACCAGAG 303
Query 83 GAAGATATCATCTTGGTTTCTTACATCCAAGAACATGGTCCTGGAAACTGGAGATCTGTG 142
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 304 GAAGACATCATCTTGGTTTCTTACATCCAAGAACATGGTCCTGGAAACTGGAGATCTGTC 363
Query 143 CCTACTCATACAGGTTTGAGGAGATGTAGCAAAAGTTGTAGATTGAGGTGGACTAATTAT 202
|| || || ||||||||||| ||||||||||| || || |||||||| ||||||||||||
Sbjct 364 CCAACACACACAGGTTTGAGAAGATGTAGCAAGAGCTGCAGATTGAGATGGACTAATTAT 423
Query 203 CTTCGACCTGGGATTAAGCGTGGAAATTTCACCGAGCATGAAGAGAAGATGATTCTCCAT 262
|||||||| || ||||||||||||||||| || |||||||||||||||| ||| | |||
Sbjct 424 CTTCGACCCGGTATTAAGCGTGGAAATTTTACTGAGCATGAAGAGAAGACAATTGTTCAT 483
Query 263 CTTCAAGCTCTTTTGGGCAACAGGTGGGCAGCTATAGCATCATACCTTCCAGAAAGGACA 322
|||||||| ||||| |||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 484 CTTCAAGCCCTTTTAGGCAACAGATGGGCAGCCATAGCATCATACCTTCCAGAAAGGACA 543
Query 323 GACAATGATATAAAGAACTATTGGAACACTCATTTGAAGAAAAAGCTCAAGAAGATGAAT 382
|||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| |||
Sbjct 544 GACAATGATATAAAGAACTATTGGAACACTCACTTGAAGAAGAAGCTCAAAAAGATTAAT 603
Query 383 GATTCTTGTGATAGTACTATCAACAATGGCCT-TGATGATAAAGACTTCTCTTCATCAAA 441
|| ||| |||| || | || || |||| | | | || || || || | |||
Sbjct 604 GAATCTGGTGA-AGAAG-AT-AATGATGGTGTCTCTTCATCAA-ACA-CTAGT--TCA-- 654
Query 442 CAAAAACACTACTTCACATCAAAGCAGCAACCCCAGCAAAGGTCAATGGGAGAGAAGGCT 501
||||| | || || |||||||| | | | ||||||||||||||| ||||| ||
Sbjct 655 CAAAAG-A--AC--CA--TCAAAGCA-CTA----A-CAAAGGTCAATGGGAAAGAAGACT 701
Query 502 TCAGACAGATATCAACATGGCTAAACAAGCTCTTTGTGATGCCTTGTCTCTT-GACAAAC 560
||||||||| || |||||||| ||||||||||||||||| ||||||||| || |||||||
Sbjct 702 TCAGACAGACATTAACATGGCAAAACAAGCTCTTTGTGAGGCCTTGTCT-TTAGACAAAC 760
Query 561 CA 562
||
Sbjct 761 CA 762
> AT1G08810.1 | Symbols: MYB60, AtMYB60 | myb domain protein 60
| chr1:2819065-2820395 REVERSE LENGTH=1123
Length=1123
Score = 292 bits (158), Expect = 3e-78
Identities = 302/368 (82%), Gaps = 24/368 (7%)
Strand=Plus/Plus
Query 21 AGATGGGAAGACCACCATGCTGTGACAAGAT-TGGAGTGAAGAAAGGGCCATGGACACCA 79
||||||| || || ||||||||||||||||| ||| | |||||||| |||||||| ||
Sbjct 65 AGATGGGTAGGCCTCCATGCTGTGACAAGATAGGGA-TCAAGAAAGGACCATGGACTCCT 123
Query 80 GAGGAAGATATCA-TCTTGGTTTCTTACATCCAAGAACATGGTCCTGGAAACTGGAGATC 138
|| |||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 124 GAAGAAGATATCATTCTT-GTTTCTTACATTCAAGAACATGGTCCTGGAAACTGGAGATC 182
Query 139 TGTGCCTACTCATACA--GGTTTGAG-GAGATGTAGCAAAAGTTGTAGATTGAGGTGGAC 195
|| || || || ||| || || | |||||| ||||||||||||||| |||| |||||
Sbjct 183 AGTTCCCAC-CA-ACACTGGGTT-ATTGAGATGCAGCAAAAGTTGTAGACTGAGATGGAC 239
Query 196 TAATTATCTTCGACCTGGGATTAAGCGTGGAAA-TTT-CACCGAGCATGAAGAGAAGA-T 252
|||||||| ||||||| ||||| |||||||| ||| | || |||||||| | || |
Sbjct 240 AAATTATCTGAGACCTGGAATTAAACGTGGAAACTTTACTCCT--CATGAAGA-AGGAAT 296
Query 253 GATTC-TCCATCTT-CAAGCTCTT-TTGGGCAACAGGTGGGCAG-CTATAGCATCATACC 308
||| | | || ||| ||||| ||| ||||| |||| ||||| | | ||||| |||||||
Sbjct 297 GAT-CATTCA-CTTGCAAGC-CTTATTGGGTAACAAATGGGC-GTCCATAGCTTCATACC 352
Query 309 TTCCAGAAAGGACAGACAATGATATAAAGAACTATTGGAACACTCATTTGAAGAAAAAGC 368
| ||| |||| || ||||||||||| |||||||| |||||||| ||||| ||||| ||||
Sbjct 353 TACCACAAAGAACGGACAATGATATCAAGAACTACTGGAACACACATTTAAAGAAGAAGC 412
Query 369 TCAAGAAG 376
|||| |||
Sbjct 413 TCAACAAG 420
> AT3G28910.1 | Symbols: ATMYB30, MYB30 | myb domain protein 30
| chr3:10911157-10913190 FORWARD LENGTH=1592
Length=1592
Score = 265 bits (143), Expect = 8e-70
Identities = 265/324 (82%), Gaps = 8/324 (2%)
Strand=Plus/Plus
Query 53 GGAGTGAAGAAAGGGCCATGGACACCAGAGGAAGATATCATCTTGGTTTCTTACATCCAA 112
||||||||||||||||||||||| || || ||||||||||| || || |||||||||||
Sbjct 317 GGAGTGAAGAAAGGGCCATGGACTCCTGAAGAAGATATCATTTTAGTCACTTACATCCAA 376
Query 113 GAACATGGTCCTGGAAACTGGAGATCTGTGCCTACTC-ATACAGGTTTGAGGAGATGTAG 171
|||||||||||||| || |||||| |||| ||||| | |||| || || ||||| ||
Sbjct 377 GAACATGGTCCTGGTAATTGGAGAGCTGTTCCTAC-CAATACTGGGCTGCTTAGATGCAG 435
Query 172 CAAAAGTTGTAGA-TTGAGGTGGACTAATTATCTT-CGACCTGGGATTAAGCGTGGAAAT 229
||| ||||||||| || || ||||| || ||| || | || || || || | || |||
Sbjct 436 CAAGAGTTGTAGACTT-AGATGGACAAACTAT-TTAAGGCCAGGAATCAAAAGAGGCAAT 493
Query 230 TTCACCGAGCATGAAGAGAAGATGATTCTCCATCTTCAAGCTCTTTTGGGCAACAGGTGG 289
||||| || |||||||| ||||||||| | ||||| ||||| || || || || || |||
Sbjct 494 TTCACAGAACATGAAGAAAAGATGATTGTTCATCTCCAAGCCCTCTTAGGAAATAGATGG 553
Query 290 GCAGCTATAGCATCATACCTTCCAGAAAGGACAGACAATGATATAAAGAACTATTGGAAC 349
|| || || || ||||| |||||| |||||||||||||||| || |||||||||||||||
Sbjct 554 GCTGCAATTGCGTCATATCTTCCACAAAGGACAGACAATGACATTAAGAACTATTGGAAC 613
Query 350 ACTCATTTGAAGAA-AAAGCTCAA 372
|||||||||||||| ||| |||||
Sbjct 614 ACTCATTTGAAGAAGAAA-CTCAA 636
> AT5G15310.1 | Symbols: ATMYB16, ATMIXTA, MYB16 | myb domain protein
16 | chr5:4974671-4976227 FORWARD LENGTH=1325
Length=1325
Score = 111 bits (60), Expect = 1e-23
Identities = 262/356 (74%), Gaps = 28/356 (8%)
Strand=Plus/Plus
Query 23 ATGGGAAGACCACCATGCTGTGACAAGATT-GGAGTGAAGAAAGGGCCATGGACACCAGA 81
||||| ||| |||| || |||||||| ||| || |||||||||| || |||||||||||
Sbjct 224 ATGGGTAGATCACCGTGTTGTGACAA-ATTGGGTTTGAAGAAAGGACCTTGGACACCAGA 282
Query 82 GGAAGAT-ATCATCTTGGTT-TCTTACATCCAAGAACATGGTCCTGGAAACTGGAGATC- 138
||| ||| | | ||| || |||| || |||||||||||| ||||| ||| | ||
Sbjct 283 GGAGGATCAGAAACTT--TTAGCTTATATTGAAGAACATGGTCATGGAAGTTGGCGTTCA 340
Query 139 TGTGCCTACTCATA-CAGGT-TTGAGGAGATGTAGCAAA-AGTTGTAGATTGAGGTGGAC 195
| ||||| | | | ||| | | |||| | ||| ||||||||| | || |||||
Sbjct 341 T-TGCCT-GAGAAAGCTGGTCTCCA-TCGATG-CGGAAAGAGTTGTAGACTAAGATGGAC 396
Query 196 TAATTATCTTCGACCTGGGATTAAGCGTGG-AAATTTC-ACCGAGCATGAAG-AGAAGAT 252
||| || || |||||| || || | || ||| ||| || | || |||| | || |
Sbjct 397 TAACTACCTAAGACCTGACATCAAAAGAGGCAAA-TTCAACTTA-CAAGAAGAACAA-AC 453
Query 253 GATTCTCCATCTTCAAGCTCTTTTGGGCAACAGGTGGGCAGCTATAGC-A-TCATACCTT 310
||| |||| || || ||||| || || ||||| ||| |||| || || | |||| ||
Sbjct 454 CATTATCCAACTCCATGCTCTGTTAGGAAACAGATGGTCAGCGATTGCTACTCAT---TT 510
Query 311 -CCAGAA-AGGACAGACAATGATATAAAGAACTATTGGAACACTCATTTGAAGAAA 364
||| || || |||||||| || || ||||||||||||||||||||||||||||||
Sbjct 511 GCCA-AAGAGAACAGACAACGAGATCAAGAACTATTGGAACACTCATTTGAAGAAA 565
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51138361646
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5