BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg937567
Length=1552
Score E
Sequences producing significant alignments: (Bits) Value
AT3G48170.1 | Symbols: ALDH10A9 | aldehyde dehydrogenase 10A9 |... 2579 0.0
AT1G74920.1 | Symbols: ALDH10A8 | aldehyde dehydrogenase 10A8 |... 856 0.0
> AT3G48170.1 | Symbols: ALDH10A9 | aldehyde dehydrogenase 10A9
| chr3:17786140-17790008 REVERSE LENGTH=1752
Length=1752
Score = 2579 bits (1396), Expect = 0.0
Identities = 1495/1544 (97%), Gaps = 2/1544 (0%)
Strand=Plus/Plus
Query 10 AGAGAGATAGTATGGCGATTACGGTGCCGAGACGGCAACTCTTCATCGGCGGTCAATGGA 69
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 80 AGAGAGAGAGTATGGCGATTACGGTGCCGAGACGGCAACTCTTCATCGGCGGTCAATGGA 139
Query 70 CTGAGCCCGTTCGCCGTAAAACTCTCCCTGTCGTCAATCCCGCCACCGAAGATATCATCG 129
|||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 140 CTGAGCCCGTTCTCCGTAAAACTCTCCCTGTTGTCAATCCCGCCACCGAAGACATCATCG 199
Query 130 GTTATATTCCAGCTGCAACTTCTGAAGATGTGGAGCTCGCTGTGGAAGCTGCTAGGAAAG 189
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 200 GTTATATTCCAGCTGCAACTTCTGAAGATGTGGAGCTTGCTGTGGAAGCTGCTAGGAAAG 259
Query 190 CATTTACTAGGAACAACGGAAAGGATTGGGCTAAAGCATCTGGTGCTGTTCGTGCCAAAT 249
||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 260 CATTTACTAGGAACAACGGAAAGGATTGGGCTAGAGCAACTGGTGCTGTTCGTGCCAAAT 319
Query 250 ACTTGCGTGCTATTGCAGCTAAGGTAATAGAGAGGAAGTCTGAACTAGCTAATCTTGAGG 309
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 320 ACTTGCGCGCTATTGCAGCTAAGGTAATAGAGAGGAAGTCTGAACTAGCTAATCTTGAGG 379
Query 310 CGATTGATTGTGGTAAACCACTAGATGAAGCAGCATGGGACATGGATGATGTTGCTGGAT 369
| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 380 CTATTGATTGCGGTAAACCTCTAGATGAAGCAGCATGGGACATGGATGATGTTGCTGGAT 439
Query 370 GTTTTGAATATTATGCTGACCTAGCTGAAGGCTTGGATGCAAAGCAGAAGGCTCCTCTTT 429
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 440 GTTTTGAATATTATGCTGACCTAGCTGAAGGCTTGGATGCAAAGCAGAAGACTCCTCTTT 499
Query 430 CTCTACCGATGGATACTTTTAAGGGTTATATTCTCAAGGAACCTATTGGTGTAGTTGGGC 489
|||| |||||||||||||||||||||||||||||||||||||| ||||| |||||| |||
Sbjct 500 CTCTTCCGATGGATACTTTTAAGGGTTATATTCTCAAGGAACCCATTGGCGTAGTT-GGC 558
Query 490 -TGATTACTCCATGGAACTATCCGTTATTGATGGCTGTCTGGAAAGTTGCTCCTTCACTT 548
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 559 ATGATTACTCCATGGAACTATCCGTTATTGATGGCTGTCTGGAAAGTCGCTCCTTCACTT 618
Query 549 GCTGCTGGGTGCACAGCAATACTGAAACCTTCAGAGTTGGCCTCCCTGACATGTTTGGAG 608
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 619 GCTGCTGGGTGCACGGCTATACTGAAACCTTCAGAGTTGGCCTCCCTGACATGTTTGGAG 678
Query 609 CTCGCTGATATTTGCCGCGAGGTGGGTCTACCACCTGGTGTTCTTAATATTCTGACTGGT 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 679 CTCGCTGATATTTGCCGCGAGGTGGGTCTACCACCTGGTGTTCTTAATATTCTGACTGGT 738
Query 669 TTAGGAACTGAAGCAGGTGCTCCGCTGGCATCGCATCCACATGTTGACAAGATTGTATTC 728
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 739 TTAGGAACTGAAGCAGGTGCTCCACTGGCATCGCATCCACATGTTGACAAGATTGTATTC 798
Query 729 ACTGGAAGCACAACAACTGGAAGCAGCATTATGACTTCCGCTGCCAAATTGGTTAAACCT 788
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 799 ACTGGAAGCACAACAACTGGAAGCAGCATTATGACTTCCGCTGCCAAATTGGTGAAACCA 858
Query 789 GTTTCCTTGGAGCTTGGGGGGAAAAGCCCTATCATTGTCTTTGATGATGTTGATATTGAT 848
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 859 GTTTCCTTGGAGCTTGGGGGTAAAAGCCCTATCATTGTCTTTGATGATGTCGATATTGAT 918
Query 849 AAAGCTGTGGAATGGACTATGTTTGGTTGTTTCTGGACGAATGGGCAGATTTGCAGTGCC 908
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 919 AAAGCTGTGGAATGGACTATGTTTGGTTGTTTCTGGACGAATGGGCAGATTTGTAGTGCC 978
Query 909 ACATCTCGACTTCTCGTGCATGAAAGGATTGCTGACGAATTTTTGGACAAGCTGGTAAAG 968
|||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 979 ACATCTCGACTTCTTGTGCATGAAAGGATTGCTGACGAGTTTTTGGACAAGCTGGTAAAG 1038
Query 969 TGGACAAAGAACATTAAGATTTCAGATCCTTTTGAAGAAGGCTGTAGGCTTGGTCCTGTT 1028
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1039 TGGACCAAGAACATTAAGATTTCAGATCCTTTTGAAGAAGGCTGTAGGCTTGGTCCTGTT 1098
Query 1029 GTCAGCAAAGGACAGTACGACAGAGTTCTGAAGTTTGTCTCAAACGCTAGTAATGAAGGT 1088
||||| |||||||||||||| |||||||| |||||||||||||||||||| |||||||||
Sbjct 1099 GTCAGTAAAGGACAGTACGAGAGAGTTCTAAAGTTTGTCTCAAACGCTAGGAATGAAGGT 1158
Query 1089 GCAACTGTCCTTTGTGGAGGAACTCGCCCTGAGCATTTAAAGAAGGGATACTTTGTTGAA 1148
|||||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 1159 GCAACTGTTCTTTGTGGAGGAGTTCGTCCTGAGCATTTAAAGAAGGGATACTTTGTTGAA 1218
Query 1149 CCTGCGATTATTTCAAATGTGACTACTTCAATGGAAATCTGGAGAGAGGAAGTCTTTGGT 1208
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1219 CCTGCGATTGTTTCAAATGTGACTACTTCAATGGAAATCTGGAGAGAGGAAGTCTTTGGT 1278
Query 1209 CCTGCTCTGTGTGTCAAAACATTTTCCACAGAGGATGAGGCAATTGAGCTGGCAAATGAC 1268
|||||||||||||| |||||||| ||||| ||||||||||||||| |||| |||||||||
Sbjct 1279 CCTGCTCTGTGTGTGAAAACATTCTCCACCGAGGATGAGGCAATTCAGCTTGCAAATGAC 1338
Query 1269 TCTCAATATGGATTAGCCGGCGCAGTATTATCAAATGATCTGGACCGCTGTGATCGTGTT 1328
||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||
Sbjct 1339 TCTCAATATGGATTAGCAGGCGCAGTATTATCAAATGATCTGGAGCGGTGTGATCGTGTT 1398
Query 1329 AGTAAGGCTTTCCAGGCGGGAATAGTATGGGTCAACTGCTCTCAGCCATGCTTCTGCCAA 1388
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1399 AGTAAGGCTTTCCAGGCGGGAATAGTGTGGGTCAACTGCTCTCAGCCATGCTTCTGCCAA 1458
Query 1389 GCTCCATGGGGTGGAACCAAACGCAGTGGATTTGGCCGTGAATTGGGAGAATGGGGACTT 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1459 GCTCCATGGGGTGGAACCAAACGCAGTGGATTTGGCCGTGAATTGGGAGAATGGGGACTT 1518
Query 1449 GAGAACTACTTGAGTGTGAAGCAGGTGACACAGTATATCTCTGATGAACCATGGGGATGG 1508
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1519 GAGAACTACTTGAGTGTGAAGCAGGTGACTCAGTATATCTCTGATGAACCATGGGGATGG 1578
Query 1509 TACAAACCTCCTTCCAAGCTCTGAGACAAACACTACTTCCTGAT 1552
||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1579 TACAAACCTCCTTCCAAGCTCTGAGACAAACACTAGTTCCTGAT 1622
> AT1G74920.1 | Symbols: ALDH10A8 | aldehyde dehydrogenase 10A8
| chr1:28139009-28142744 REVERSE LENGTH=1843
Length=1843
Score = 856 bits (463), Expect = 0.0
Identities = 1136/1455 (78%), Gaps = 70/1455 (5%)
Strand=Plus/Plus
Query 100 TCGTCAATCCCGCCACCGAAGATATCATCGGTTATATTCCAGCTGCAACTTCTGAAGATG 159
|||| ||||| || || ||||| |||| ||| ||||||| || || || | || || |
Sbjct 251 TCGTTAATCCAGCTACTGAAGAGGTCATTGGTGATATTCCTGCAGCTACAACGGAGGACG 310
Query 160 TGGA-GCTCGCTGTGGAA-GCTGCTAGGAA-AGCATTTA-CTAGGAA-CAACGGAAAGGA 214
|||| | | ||||| || |||||| ||| |||| ||| | ||||| || ||||| ||
Sbjct 311 TGGATG-TTGCTGT-CAACGCTGCT-CGAAGAGCA-TTATCAAGGAATAAAGGGAAA-GA 365
Query 215 TTGGGCTAAAGCATCTGGTGCTGTTCGTGCCAAATACTTGCGTGCTATTGCAGCTAAGGT 274
|||||| |||||| |||| ||||||||||| || || || ||||||||||| ||||||||
Sbjct 366 TTGGGCCAAAGCACCTGGAGCTGTTCGTGCTAAGTATTTACGTGCTATTGCTGCTAAGGT 425
Query 275 -AATAGAGAGGAAGTCTGAACTAGCTAATCTTGAGGCGATTGATTGTGGTAAACCACTAG 333
||| || || ||| | || || || || || |||||| ||||||||||||||||| | |
Sbjct 426 AAAT-GAAAGAAAGACGGATCTGGCAAAGCTCGAGGCGCTTGATTGTGGTAAACCATTGG 484
Query 334 ATGAAGCAGCATGGGACATGGATGATGTTGCTGGATGTTTTGAATATTATGCTGACCTAG 393
||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||| |
Sbjct 485 ATGAAGCAGTATGGGATATGGATGATGTTGCTGGATGTTTTGAATTTTATGCTGACCTTG 544
Query 394 CTGAAGGCTTGGATGCAAAGCAGAAGGCTCCTCTTTCTCTACCGATGGATACTTTTAAGG 453
||||||| || ||||| |||||||| || || | || || || ||||| | |||||||
Sbjct 545 CTGAAGGATTAGATGCTAAGCAGAAAGCACCAGTCTCGCTTCCCATGGAGAGTTTTAAGA 604
Query 454 GTTATATTCTCAAGGAACCTATTGGTGTAGTTGGG-CTGATTACTCCATGGAACTA-TCC 511
||||| |||| ||| ||||| | || || | |||| || ||||| |||||||| || ||
Sbjct 605 GTTATGTTCTGAAGCAACCTCTCGGAGTTG-TGGGACTTATTACACCATGGAATTACCCC 663
Query 512 GTTATTGATGGCTGTCTGGAAAGTTGCTCCTTCACTTGCTGCTGGGTGCACAGCAATACT 571
|| ||||||||||| ||||| || |||||||| |||||||| |||||||| || || ||
Sbjct 664 CTT-TTGATGGCTGTTTGGAAGGTGGCTCCTTCCCTTGCTGCAGGGTGCACTGCGATTCT 722
Query 572 GAAACCTTCAGAGTTGGCCTCCCTGACATGTTTGGAGCTCGCTGATATTTGCCGCGAGGT 631
|| || |||||| |||| || | || ||||||||||| ||||||||||| || || ||
Sbjct 723 CAAGCCATCAGAGCTGGCATCAGTTACTTGTTTGGAGCTTGCTGATATTTGTCGAGAAGT 782
Query 632 GGGTCTACCACCTGGTGTTCTTAATATTCTGACTGGTTTAGGAACTGAAGCAGGTGCTCC 691
||||| || ||||| || || ||| || |||||||||| || | ||||| ||||||||
Sbjct 783 TGGTCTTCCTCCTGGGGTCCTCAATGTTTTGACTGGTTTCGGTTCGGAAGCTGGTGCTCC 842
Query 692 GCTGGCATCGCATCCACATGTTGACAAGATTGTATTCACTGGAAG-CACAACAACTGGAA 750
||||||| ||||| || |||||||||| ||| |||||||| | | || ||||
Sbjct 843 TTTGGCATCACATCCTGGCGTGGACAAGATTGCATTTACTGGAAGTTTC-GCCACAGGAA 901
Query 751 G-CAGCATTATGACTTCCGCTGC-CAAATTGGTTAAACCTGTTTCCT-TGGAGCTTGGGG 807
| || | ||||| ||||||| | | ||||| || ||||||| || |||| ||||| |
Sbjct 902 GTAAG-GTCATGACAGCCGCTGCTC-AGTTGGTGAAGCCTGTTT-CTATGGAACTTGGTG 958
Query 808 GGAAAAGCCCTATCATTGTCTTTGATGATGTTGATATTGATAAAGCTG-TGGAATGGACT 866
|||| |||||| ||||||| |||||||| |||||| |||||||||||| | |||||| ||
Sbjct 959 GGAAGAGCCCTCTCATTGTGTTTGATGACGTTGATCTTGATAAAGCTGCT-GAATGGGCT 1017
Query 867 ATGTTT-GGTTGTTTCTGGACGAATGGGCAGATTTGCAGTGCCACATCTCGACTTCTCGT 925
| ||| ||||| |||||||| ||||| || || |||||||| || || || ||||| ||
Sbjct 1018 CT-TTTCGGTTGCTTCTGGACAAATGGTCAAATCTGCAGTGCAACTTCCCGCCTTCTTGT 1076
Query 926 GCATGAAAGGATTGCTGA-C-GAATTTTTGGACAAGCTGGTAAAGTGGA-CAAAGAACAT 982
|| ||||| || || | | || || | || ||||| ||||| |||| | ||||||||
Sbjct 1077 TCACGAAAGCATCGC--ATCTGAGTTCATAGAGAAGCTTGTAAAATGGAGC-AAGAACAT 1133
Query 983 TAAGATTTCAGATCCTTTTGAAGAAGGCTGTAGGCTTGGTCCTGTTGTCAGCAAAGGACA 1042
||| |||||||| || | |||||||| || |||||||||||||| || |||||||||||
Sbjct 1134 TAAAATTTCAGACCCCATGGAAGAAGGATGCAGGCTTGGTCCTGTAGTTAGCAAAGGACA 1193
Query 1043 GTACGA-CAGAGT-TCTGAAGTTTGTCTCAAAC-G-CTAGTAATGAAGGTGCAACTG-TC 1097
|||||| ||| | | |||||||| |||| ||| | | || | |||||| ||||| | |
Sbjct 1194 GTACGAGAAGA-TAT-TGAAGTTTATCTC-AACGGCCAAG-AGTGAAGGAGCAAC-GAT- 1247
Query 1098 CTTTG--TGGAGGAACTCGCCCTGAGCAT-TTAAAGAAGGGATACTTTGTTGAACCTGCG 1154
| ||| ||| || | || ||||||||| | || ||||| | ||| ||||||| |
Sbjct 1248 C-TTGCATGGTGGTTCCCGACCTGAGCATCTGGAA-AAGGGCTTCTTCATTGAACCAACC 1305
Query 1155 ATTATTTCAAATGTGACTACTTCAATGGAAATCTGGAGAGAGGAAGTCTTT-GGTCCTGC 1213
|| || | |||| || ||||||||| |||| |||||||| ||||| ||| || ||||
Sbjct 1306 ATCATAACTGATGTAACCACTTCAATGCAAATATGGAGAGAAGAAGT-TTTCGGGCCTGT 1364
Query 1214 TCTGTGTGTCAAAACATTTTCCACAGAGGATGAGGCAATTGAGCTGGCAAATGACTCTCA 1273
||| || || ||||||||| ||| ||||| |||||||||||||| ||||||||||||||
Sbjct 1365 TCTTTGCGTGAAAACATTTGCCAGTGAGGACGAGGCAATTGAGCTAGCAAATGACTCTCA 1424
Query 1274 ATATGGATTAGCCG-GC-GCAGT-ATTATCAAATGATC-TGGACCGCTGTGATCGTGTTA 1329
|| ||| ||| | || ||||| | |||| ||||| | || | ||||| ||| | |
Sbjct 1425 TTACGGACTAG--GAGCTGCAGTGA-TATCTAATGA-CACAGAAAGATGTGACCGTATAA 1480
Query 1330 GTAAGG-CTTTCCAGGC-GGGAATAGTATGGGTCAACTGCTCTCAGCCATGCTTCT-GCC 1386
| ||| |||| | || ||| || || ||| | |||||||| ||||| ||||| | ||
Sbjct 1481 GCGAGGCCTTT-GAAGCTGGG-ATTGTCTGGATTAACTGCTCGCAGCCTTGCTT-TACCC 1537
Query 1387 AAGCTCCATGGGGTGGAACCAAACGCAGTGGATTTGGCCGTGAA-TTGGGAGAATGGGGA 1445
|||| ||||||||||| |||||||||||| ||||| || ||| || ||||||||||||
Sbjct 1538 AAGCCCCATGGGGTGGTGTCAAACGCAGTGGGTTTGGACGAGAACTT-GGAGAATGGGGA 1596
Query 1446 CTTGAGAACTACTTGAGTGTGAAGCAGGTGACACAGTATATCT-CTGATGAACCATGGGG 1504
||||| |||||||||||||||||||| ||||| | || | || | | || || |||||
Sbjct 1597 CTTGATAACTACTTGAGTGTGAAGCAAGTGACTCTCTACA-CTTCAAACGATCCCTGGGG 1655
Query 1505 ATGGTACAAACCTCC 1519
|||||||||| ||||
Sbjct 1656 ATGGTACAAATCTCC 1670
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76606031670
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5