BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg937600
Length=4180
Score E
Sequences producing significant alignments: (Bits) Value
AT3G48430.1 | Symbols: REF6 | relative of early flowering 6 | c... 2832 0.0
> AT3G48430.1 | Symbols: REF6 | relative of early flowering 6 |
chr3:17935609-17940746 FORWARD LENGTH=4373
Length=4373
Score = 2832 bits (1533), Expect = 0.0
Identities = 1852/2007 (92%), Gaps = 18/2007 (1%)
Strand=Plus/Plus
Query 22 ATGGCGGTTTCAGAGCAGAGTCAAGACGTGTTTCCATGGCTTAAATCGTTACCGGTTGCT 81
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGTTTCAGAGCAGAGTCAAGATGTGTTTCCATGGCTTAAATCGTTACCGGTTGCT 60
Query 82 CCAGAGTTCAGACCTACTTTAGCAGAGTTTCAAGATCCGATCGCCTACATTTTTAAGATC 141
|||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||
Sbjct 61 CCAGAGTTCAGACCTACTCTAGCAGAGTTTCAAGATCCGATCGCTTACATTTTGAAGATT 120
Query 142 GAAGAAGAAGCTTCTAGATACGGAATCTGTAAAATTCTGCCTCCACTGCCTCCTCCTTCT 201
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 121 GAAGAAGAAGCTTCTAGATATGGAATCTGTAAAATTCTGCCTCCACTGCCTCCTCCTTCC 180
Query 202 aaaaaaaCCTCAATTTCTAACCTCAACCGTTCTCTGGCGGCAAGAGCGGCGGCGAGGGTT 261
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 181 AAAAAAACCTCGATTTCTAATCTCAACCGTTCTCTGGCGGCAAGAGCGGCGGCGAGGGTT 240
Query 262 CGTGACGGCGGC-GAGAGTTCGTTTGATTACGACGGTGGTCCCACATTCGCCACGCGGCA 320
|||||||||||| | | ||| |||||| |||||||||||||||||||||||||| ||
Sbjct 241 CGTGACGGCGGCTTTG-GCGCGTGTGATTATGACGGTGGTCCCACATTCGCCACGCGCCA 299
Query 321 ACAGCAGATCGGTTTTTGCCCTAGGAAGCAGCGTCCCGTGCAGAGACCTGTGTGGCAGAG 380
||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 300 GCAGCAGATCGGGTTTTGCCCTAGGAAACAGCGTCCAGTGCAGAGACCTGTGTGGCAGAG 359
Query 381 CGGAGAGCATTACAGTTTTGGTGAGTTCGAGGCCAAAGCTAAGACCTTTGAGAAGAATTA 440
|||||| | ||| |||||||||||||||| |||||||||| |||||||||||||||
Sbjct 360 TGGAGAGGAGTACTCTTTTGGTGAGTTCGAGTTTAAAGCTAAGAACTTTGAGAAGAATTA 419
Query 441 TCTGAAGAAATGTGGCAAAAAGAGTCAACTCTCTGCCCTAGAAATCGAAACACTTTACTG 500
||| ||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 420 TCTCAAGAAATGTGGTAAAAAGAGTCAACTCTCTGCCCTTGAAATTGAAACACTTTACTG 479
Query 501 GAGAGCAACAGTGGATAAACCTTTCTCTGTTGAGTATGCCAATGACATGCCAGGTTCGGC 560
|||||| || ||||||||||| ||||||||||||||||||||||||||||| || |||||
Sbjct 480 GAGAGCCACTGTGGATAAACCCTTCTCTGTTGAGTATGCCAATGACATGCCTGGCTCGGC 539
Query 561 TTTTATCCCTCTGAGTCTGGCAGCTGCGAGGAGGAGAGAGTATGGTGGCGATGGAGGAAC 620
||||||||||||||||||||| ||||||||||||||||||| |||||| || ||||||||
Sbjct 540 TTTTATCCCTCTGAGTCTGGCTGCTGCGAGGAGGAGAGAGTCTGGTGGTGAAGGAGGAAC 599
Query 621 AGTTGGTGAGACAGCTTGGAACATGAGGGCAATGTCTAGAGCCGAAGGATCATTGCTTAA 680
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 AGTTGGTGAGACCGCTTGGAACATGAGGGCAATGTCTAGAGCCGAAGGATCATTGCTTAA 659
Query 681 GTTCATGAAGGAGGAGATTCCTGGAGTTACATCACCAATGGTGTATATTGCTATGATGTT 740
|||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct 660 GTTCATGAAGGAAGAGATCCCTGGAGTTACATCACCAATGGTGTATGTTGCTATGATGTT 719
Query 741 TAGTTGGTTTGCTTGGCATGTGGAGGATCATGACCTTCATAGTCTCAATTACTTGCATAT 800
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 720 TAGTTGGTTTGCTTGGCATGTGGAGGACCATGACCTTCATAGTCTCAATTACTTGCATAT 779
Query 801 GGGTGCTGGTAAGACTTGGTACGGTGTGCCAAAGGATGCTGCTGTGGCTTTTGAGGAGGT 860
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 780 GGGTGCTGGTAAGACTTGGTACGGTGTGCCAAAGGATGCTGCTCTGGCTTTTGAGGAGGT 839
Query 861 GGTTAGGGTTCATGGTTATGGTGGAGAGCTTAATCCTCTTGTGACCATTT-CTACTCTTG 919
||||||||||||||||| |||| |||||| |||||||||||||| |||| |||||||||
Sbjct 840 TGTTAGGGTTCATGGTTACGGTGAAGAGCTCAATCCTCTTGTGAC-ATTTTCTACTCTTG 898
Query 920 GTGAGAAGACAACTGTGATGTCACCTGAAGTTTTTGTTAAAGCTGGAATACCTTGTTGCA 979
|||||||||||||||||||||| |||||||| ||||||||||| |||||||| |||||||
Sbjct 899 GTGAGAAGACAACTGTGATGTCTCCTGAAGTATTTGTTAAAGCCGGAATACCGTGTTGCA 958
Query 980 GGTTAGTACAAAATCCTGGAGAGTTTGTTGTCACTTTTCCAAGAGCATATCATTCAGGG- 1038
||||||| |||||||||||||||||||| ||||| ||||| |||| |||||||| |||
Sbjct 959 GGTTAGTGCAAAATCCTGGAGAGTTTGTCGTCACCTTTCCGGGAGCTTATCATTC-GGGA 1017
Query 1039 TTTAGTCACGGATTCAATTGTGGAGAAGCATCTAACATTGCAACTCCCGAATGGTTGAGA 1098
|||||||| ||||| |||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 1018 TTTAGTCATGGATTTAATTTTGGAGAAGCATCTAACATTGCCACTCCCGAATGGTTGAGA 1077
Query 1099 GTGGCTAAAGATGCTGCTATCCGCCGAGCTGCTATAAATTACCCTCCAATGGTTTCTCAT 1158
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1078 ATGGCTAAAGATGCTGCTATCCGGCGAGCTGCTATAAATTACCCTCCAATGGTTTCTCAT 1137
Query 1159 CTCCAGTTACTATATGACTATGCATTGGCTCTAGGTTCTAGAATGCCAACAAGCATCAA- 1217
|||||| |||| ||||||| || ||||||||||||||||||| ||||||||||||||||
Sbjct 1138 CTCCAGCTACTTTATGACTTTGTATTGGCTCTAGGTTCTAGAGTGCCAACAAGCATCAAT 1197
Query 1218 CACCAAACCACGGAGTTCTAGATTGAAAGATAAGAAAAGAAGCGAAGGAGAAAGATTGAC 1277
| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 1198 C-CCAAACCACGGAGTTCTAGATTAAAAGATAAGGCAAGAAGCGAAGGAGAAAGATTGAC 1256
Query 1278 CAAAAAGCTGTTTGTGCAAAACATTATCCACAACAATGAATTGCTCTCTTCTCTCGGAAA 1337
||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 1257 CAAAAAGCTATTTGTGCAAAACATTATCCACAACAACGAATTGCTTTCTTCTCTCGGAAA 1316
Query 1338 AGGATCCCCTGTGGCCCTTCTCCCACAGAGTTCTTCAGATATATCAGTTTGTTCTGACCT 1397
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1317 AGGATCCCCAGTGGCCCTTCTCCCACAGAGTTCCTCAGATATATCAGTTTGTTCTGACCT 1376
Query 1398 ACGAATTGGATCCAATTTGATAACTAACCAGGAAAACCCAATCCAATTAAAGTCTGAGGA 1457
|||||||||||| |||||||||| |||||||||||||||||||| ||||||| ||||||
Sbjct 1377 GCGAATTGGATCCCATTTGATAACCAACCAGGAAAACCCAATCCAGTTAAAGTGTGAGGA 1436
Query 1458 CTTAAGTTCTGATAGTGTTATGGTCGGTCTCAACAACGGTTTAAAGAATACAGTTTCAGT 1517
||||||||||||||||||| |||| | ||||| |||||||||||| |||||||||||||
Sbjct 1437 CTTAAGTTCTGATAGTGTTGTGGTTGATCTCAGTAACGGTTTAAAGGATACAGTTTCAGT 1496
Query 1518 AAAAGAAAAGTTTACATCTTTATGTGAAAGGAACAGAAATCATCTGGCAAGCA-GTGAGA 1576
|||||||| |||||||||||||||||||||| ||||||||| || ||||||| | ||||
Sbjct 1497 GAAAGAAAAATTTACATCTTTATGTGAAAGGAGCAGAAATCACCTAGCAAGCACG-GAGA 1555
Query 1577 AGGACACTCAAGAAACTCTGTCTGATGCTGAAAGGAGGAAAAATGATGGAGCTGTTGCGC 1636
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||
Sbjct 1556 AGGACACTCAAGAAACTCTGTCTGATGCTGAAAGGAGGAAGAATGATGCAGCTGTTGCGC 1615
Query 1637 TTTCGGATCAAAGGCTTTTCTCTTGTGTTACATGTGGAGTCTTAAGCTTTGATTGTGTAG 1696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1616 TTTCGGATCAAAGGCTTTTCTCTTGTGTTACATGTGGAGTCTTAAGCTTTGATTGTGTAG 1675
Query 1697 CTATTGTTCAACCTAAAGAAGCAGCAGCTAGATATCTCATGTCTGCAGATTGTAGCTTCT 1756
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1676 CTATCGTTCAACCTAAAGAAGCAGCTGCTAGATATCTCATGTCTGCAGATTGTAGCTTCT 1735
Query 1757 TCAATGATTGGACAGTTGTTTCCGGGTCTGCAAATCTTGGTCAGGCTGCAAGATCACTTC 1816
||||||||||||||| || ||| || ||||||||||||||||||||||||||||||||||
Sbjct 1736 TCAATGATTGGACAGCTGCTTCTGGATCTGCAAATCTTGGTCAGGCTGCAAGATCACTTC 1795
Query 1817 ATC-TGCAAAGCACGGAAAAGCATGATATGGATTTCTTCTACAATGTTCCT-TCTCAAAC 1874
||| | ||||||| || ||||||||| | ||| |||||||||||||||| | ||||||
Sbjct 1796 ATCCT-CAAAGCAAAGAGAAGCATGATGTAAATTACTTCTACAATGTTCCTGT-TCAAAC 1853
Query 1875 TACGGATCACTCAATGAATACAGGTGACCAAAAAACTTCAACAG-TGTCTCTAACAACAG 1933
|| |||||| ||| |||| || || || ||||||||||||||| | || | |||| ||
Sbjct 1854 TATGGATCATTCAGTGAAGACTGGCGATCAAAAAACTTCAACAACT-TCCCCGACAATAG 1912
Query 1934 CTCATAAAAA-AGATGGTGCTCTTAGTTTGTTAGCTTCAGCGTATGGAGATTCTTCTGAT 1992
| |||||| | | ||| || |||| | ||||||||||||| |||||||| |||||||||
Sbjct 1913 CGCATAAAGATA-ATGATGTTCTTGGGATGTTAGCTTCAGCATATGGAGACTCTTCTGAT 1971
Query 1993 TCTGAGGAAGAAGGTCACAAAGTCTTA 2019
|| |||||||||| ||| |||| ||||
Sbjct 1972 TCCGAGGAAGAAGATCAAAAAGGCTTA 1998
Score = 1426 bits (772), Expect = 0.0
Identities = 930/1007 (92%), Gaps = 7/1007 (1%)
Strand=Plus/Plus
Query 2264 TACCCTTTGTTCCAAGATCTGATGACGATTCTTCTCGGTTGCACGTGTTTTGTCTAGAGC 2323
|||| ||| |||||||||||||||||||||| | ||||||||||||||||||||| ||||
Sbjct 2165 TACCATTTATTCCAAGATCTGATGACGATTCATGTCGGTTGCACGTGTTTTGTCTTGAGC 2224
Query 2324 ATGCTGCAGAAGTGGAACAGAAACTCCTTCCTATTGGGGGAATTCATTTAATGTTACTGT 2383
||||||| |||||||||||| |||| | |||| ||||||| ||| | |||||||||||||
Sbjct 2225 ATGCTGCGGAAGTGGAACAGCAACTTCGTCCTTTTGGGGGGATTAACTTAATGTTACTGT 2284
Query 2384 CCCATCCAGAGTACCCCAGGATAGAGGCTGAAGCAAAGATAGTTTCCGAAGAGCTCGTTA 2443
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 2285 GCCATCCAGAGTACCCCAGGATAGAGGCTGAAGCAAAGATAGTTGCCGAAGAGCTCGTCA 2344
Query 2444 TCAATCACGATTGGAATGATACTGAATTCAGGAATGTGACCCGAGAGGATGAGGAAACGA 2503
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2345 TCAATCACGAATGGAATGATACTGAATTCAGGAATGTGACCCGAGAGGATGAGGAAACGA 2404
Query 2504 TTCAGGCAGCCTTGGATAATGTTGAAGCTAAGGGTGGGAACAGTGATTGGACTGTAAAAT 2563
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2405 TTCAGGCAGCGTTGGATAATGTTGAAGCTAAGGGTGGGAACAGTGATTGGACCGTAAAAT 2464
Query 2564 TGGGTATTAACCTTTCTTACAGTGCTATTCTCAGTCGCTCTCCTCTGTACAGTAAGCAGA 2623
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2465 TGGGTGTTAACCTTTCTTACAGCGCTATTCTCAGTCGCTCTCCTCTGTACAGTAAGCAGA 2524
Query 2624 TGCCTTACAACTCCGTCATATACAATGCATTCGGTCGCAGCTCTCCAGCAACAAGCTCAC 2683
|||| || |||||| |||||||||| || ||||||||||||||||||| | | |||||||
Sbjct 2525 TGCCGTATAACTCCATCATATACAAGGCGTTCGGTCGCAGCTCTCCAGTAGCGAGCTCAC 2584
Query 2684 CCTTGAAACCCGAAGTCTTTGGTAGAAGATCTTCCAGACAGAGGAAATATGTTGTTGGAA 2743
||| ||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||||
Sbjct 2585 CCTCGAAACCCAAAGTCTCTGGTAAAAGATCGTCCAGACAGAGGAAATATGTTGTTGGAA 2644
Query 2744 AATGGTGTGGTAAGGTTTGGATGTCGCATCAGGTGCATCCCTTTTTGCTGGAGCAGGACT 2803
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2645 AATGGTGTGGTAAGGTTTGGATGTCACATCAGGTGCATCCCTTTTTGCTGGAGCAGGACT 2704
Query 2804 TAGAGGGGGGAGAATCTGAAAGAAGTTGTCATCTCCGAGCTGCTATGGATGAGGATGCCG 2863
||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 2705 TAGAGGGGGAAGAATCTGAAAGAAGTTGTCATCTTCGAGTTGCTATGGATGAGGATGCCA 2764
Query 2864 CTGGAAAGAGATTTTTTCCTAATAATGTTTCTAGAGATGCAACAACAATGTTTGGAAGAA 2923
|||||||||||| ||||||||||||||||| || ||| | |||||||||||||||||||
Sbjct 2765 CTGGAAAGAGATCGTTTCCTAATAATGTTTCCAGGGATTCGACAACAATGTTTGGAAGAA 2824
Query 2924 AGTACTGTAGGAAGAGAAAGGTCAGGGCAAAGGCTGTGCCACGCAAGAAGCTTACTTCTT 2983
|||| ||||||||||||||| | || |||||||| |||||||||||||||||||||||||
Sbjct 2825 AGTATTGTAGGAAGAGAAAGATAAGAGCAAAGGCGGTGCCACGCAAGAAGCTTACTTCTT 2884
Query 2984 TTAAGAGGGAAGATGGAGTTTCTGATGACACATCAGAAGATCATTCTTATAAGCAGCAAT 3043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2885 TTAAGAGGGAAGATGGAGTTTCTGATGACACATCAGAAGATCATTCTTATAAGCAGCAAT 2944
Query 3044 GGAGGGCTTCCGGGAATGAGGAAGAGTCTTATTTTGAGACAGGGAATACAGTTTCTGGTG 3103
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct 2945 GGAGGGCTTCCGGGAATGAGGAAGAGTCTTATTTTGAGACAGGGAACACAGCTTCTGGTG 3004
Query 3104 ATTCGTCAAATCAAATGTCTGATCAGCAGCTCAAGGGAATTCGTC-GACACAGGGGTGT- 3161
|||| ||||||||||||||||||| ||| | ||||||||| || |||| | ||| |
Sbjct 3005 ATTCATCAAATCAAATGTCTGATCCGCA-C--AAGGGAATTA-TCAGACATAAAGGT-TA 3059
Query 3162 TAAAGAATTTGAGTCCGATGATGAGGTTTCAGATCGTTCACTTGGAGAAGAATATGCTGT 3221
||||||||||||||| ||||||||||||||||| ||||||||||| ||||| ||| ||||
Sbjct 3060 TAAAGAATTTGAGTCAGATGATGAGGTTTCAGACCGTTCACTTGGGGAAGAGTATACTGT 3119
Query 3222 AAGGGAACGTGCAGTTTCAGAGAGCTCAACGGAGAATAGCTTTCAGC 3268
| ||| | |||||| |||||||||||||| ||||||| ||| |||||
Sbjct 3120 ACGGGCATGTGCAGCTTCAGAGAGCTCAATGGAGAATGGCTCTCAGC 3166
Score = 771 bits (417), Expect = 0.0
Identities = 528/581 (91%), Gaps = 9/581 (2%)
Strand=Plus/Plus
Query 3584 AGACGAATCAAGAATTCGATTCATACATGGAAGGACCTAGCACACGGCTTAGGGTGAGA- 3642
||| |||| ||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 3506 AGAAGAATGAAGAATTGGATTCATACATGGAGGGACCTAGCACACGGCTTAGGGTGAGAC 3565
Query 3643 ATCCCA-AAGCCCTCAAGAGTGTCTTCAGAAACGAAACCAAAGAAAATTGGTAAGAAAG- 3700
|| || ||||| || |||| ||||| |||||| ||||||||||| ||||||||| |||
Sbjct 3566 AT--CAGAAGCCGTCGAGAGGGTCTTTAGAAACAAAACCAAAGAAGATTGGTAAG-AAGA 3622
Query 3701 GAAGTCGTAATGCTTCCTTCTCCAGAGTTGCAACTgaagaagatgtggagg---aagaag 3757
||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 3623 GAAGTGGTAATGCTTCCTTCTCCAGAGTTGCAACTGAAAAAGATGTGGAGGAAAAAGAAG 3682
Query 3758 aagaagaagaagaaaaagagaatgaggaagaggaaTGTGCGGCGTACCAATGTGACATGG 3817
|||||||||||||| ||||||||||||||||||||||||| || ||||||||| ||||||
Sbjct 3683 AAGAAGAAGAAGAAGAAGAGAATGAGGAAGAGGAATGTGCAGCATACCAATGTAACATGG 3742
Query 3818 AGGGTTGCACAATGAGTTTTAGGTCGGAAAAACAGTTGACATTGCATAAAAGAAACATCT 3877
|||||||||| |||||||| || |||||||||||||||| || || ||||||||||| |
Sbjct 3743 AGGGTTGCACGATGAGTTTCAGTTCGGAAAAACAGTTGATGTTACACAAAAGAAACATAT 3802
Query 3878 GCCCTGTTAAAGGCTGTGGTAAAAACTTCTTCTCACACAAGTATTTGGTTCAACACCAGC 3937
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3803 GCCCAATTAAAGGCTGTGGTAAAAACTTCTTCTCACACAAGTATTTGGTTCAACACCAGC 3862
Query 3938 GAGTTCACTCAGACGACCGTCCTCTGAAATGTCCATGGAAGGGCTGTAACATGACGTTTA 3997
| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |
Sbjct 3863 GTGTTCACTCAGACGACCGTCCTCTGAAATGTCCATGGAAGGGATGTAAGATGACGTTCA 3922
Query 3998 AGTGGGCTTGGTCTAGAACTGAGCACATAAGAGTTCACACAGGCGCTAGGCCTTATGTTT 4057
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 3923 AGTGGGCTTGGTCTAGAACCGAGCACATAAGGGTTCACACAGGCGCTAGGCCTTATGTTT 3982
Query 4058 GCGCTGAACCGGGTTGTGGTCAAACATTCAGATTCGTCTCTGACTTCAGCAGGCACAAAC 4117
|||||||||||| |||||||||||||||||| || ||||||||||||||| |||| |||
Sbjct 3983 GCGCTGAACCGGATTGTGGTCAAACATTCAGGTTTGTCTCTGACTTCAGCCGGCATAAAA 4042
Query 4118 GAAAAACCGGTCATTCAGTTAAAAAGACCCAGAAAAGGTGA 4158
| || ||||||||||| ||||| |||||| | |||||||||
Sbjct 4043 GGAAGACCGGTCATTCGGTTAAGAAGACCAACAAAAGGTGA 4083
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 208343314279
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5